Gene annotation
Transcriptome id Sobic.007G146300.1
Synonym Sb07g022100
Functional annotation pectinesterase, putative, expressed
UniProt C5YLR7
Pfam PF04043 PF01095
Panther DB PTHR31707 PTHR31707:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity GO:0005618cell wall


Orthologs (automatic annotation)
TAIR AT2G26450 : Plant invertase/pectin methylesterase inhibitor superfamily
RAP-DB (Rice) LOC_Os08g34910.1 : pectinesterase, putative, expressed
MaizeGDB (Corn) Zm00025a005792 , Zm00025a013953 , Zm00025a047112
Brachypodium KQJ90350
Barley HORVU5Hr1G063260.1 , HORVU5Hr1G063260.2 , HORVU5Hr1G063260.3 , HORVU2Hr1G080170.1 , HORVU5Hr1G059120.2 , HORVU5Hr1G059120.1
Wheat TraesCS5B02G215400 , TraesCS5A02G216500 , TraesCS5D02G224600 , TraesCS2B02G341700 , TraesCS2D02G322500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
2 Sobic.004G041800 expressed protein -
3 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
5 Sobic.005G209300 GRAS family transcription factor domain containing protein, expressed -
6 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
7 Sobic.001G024250 - -
8 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
9 Sobic.006G105500 pectinesterase, putative, expressed -
10 Sobic.004G123100 ATROPGEF7/ROPGEF7, putative, expressed -
11 Sobic.002G029000 protein kinase, putative, expressed -
12 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.006G193700 DUF581 domain containing protein, expressed -
14 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.004G334900 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7
16 Sobic.010G151575 - -
17 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
18 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
19 Sobic.004G359900 expressed protein -
20 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -


Gene co-expression network
sample Sobic007G146300 Sobic007G146300 Sobic004G080000 Sobic004G080000 Sobic007G146300--Sobic004G080000 Sobic004G041800 Sobic004G041800 Sobic007G146300--Sobic004G041800 Sobic010G276200 Sobic010G276200 Sobic007G146300--Sobic010G276200 Sobic005G023600 Sobic005G023600 Sobic007G146300--Sobic005G023600 Sobic005G209300 Sobic005G209300 Sobic007G146300--Sobic005G209300 Sobic001G466100 Sobic001G466100 Sobic007G146300--Sobic001G466100 Sobic001G024250 Sobic001G024250 Sobic007G146300--Sobic001G024250 Sobic010G176400 Sobic010G176400 Sobic007G146300--Sobic010G176400 Sobic006G105500 Sobic006G105500 Sobic007G146300--Sobic006G105500 Sobic004G080000--Sobic004G041800 Sobic004G080000--Sobic007G146300 Sobic004G080000--Sobic001G466100 Sobic004G080000--Sobic010G276200 Sobic004G080000--Sobic005G023600 Sobic004G080000--Sobic005G209300 Sobic004G080000--Sobic010G176400 Sobic004G123100 Sobic004G123100 Sobic004G080000--Sobic004G123100 Sobic003G329600 Sobic003G329600 Sobic004G080000--Sobic003G329600 Sobic004G041800--Sobic004G080000 Sobic004G041800--Sobic001G466100 Sobic004G041800--Sobic007G146300 Sobic004G041800--Sobic010G276200 Sobic004G041800--Sobic005G209300 Sobic010G034300 Sobic010G034300 Sobic004G041800--Sobic010G034300 Sobic004G041800--Sobic010G176400 Sobic009G252000 Sobic009G252000 Sobic004G041800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic004G041800--Sobic009G091000 Sobic010G276200--Sobic004G080000 Sobic010G276200--Sobic004G041800 Sobic010G276200--Sobic007G146300 Sobic010G276200--Sobic005G023600 Sobic010G276200--Sobic001G466100 Sobic010G276200--Sobic010G176400 Sobic010G276200--Sobic006G105500 Sobic010G276200--Sobic001G024250 Sobic010G089900 Sobic010G089900 Sobic010G276200--Sobic010G089900 Sobic006G193700 Sobic006G193700 Sobic005G023600--Sobic006G193700 Sobic005G023600--Sobic006G105500 Sobic004G359900 Sobic004G359900 Sobic005G023600--Sobic004G359900 Sobic010G151575 Sobic010G151575 Sobic005G023600--Sobic010G151575 Sobic005G023600--Sobic007G146300 Sobic005G023600--Sobic010G276200 Sobic005G023600--Sobic004G080000 Sobic005G023600--Sobic010G089900 Sobic002G224000 Sobic002G224000 Sobic005G023600--Sobic002G224000 Sobic005G209300--Sobic004G041800 Sobic005G209300--Sobic004G080000 Sobic004G331500 Sobic004G331500 Sobic005G209300--Sobic004G331500 Sobic005G209300--Sobic001G466100 Sobic005G209300--Sobic007G146300 Sobic005G209300--Sobic010G034300 Sobic009G165900 Sobic009G165900 Sobic005G209300--Sobic009G165900 Sobic009G166000 Sobic009G166000 Sobic005G209300--Sobic009G166000 Sobic010G254100 Sobic010G254100 Sobic005G209300--Sobic010G254100 Sobic001G466100--Sobic009G252000 Sobic001G466100--Sobic009G091000 Sobic001G466100--Sobic010G034300 Sobic001G466100--Sobic004G041800 Sobic001G466100--Sobic010G254100 Sobic008G097800 Sobic008G097800 Sobic001G466100--Sobic008G097800 Sobic007G221932 Sobic007G221932 Sobic001G466100--Sobic007G221932 Sobic001G036200 Sobic001G036200 Sobic001G466100--Sobic001G036200 Sobic001G466100--Sobic010G176400 Sobic001G024250--Sobic007G146300 Sobic001G024250--Sobic004G080000 Sobic001G024250--Sobic010G276200 Sobic001G024250--Sobic004G041800 Sobic001G024250--Sobic005G209300 Sobic001G024250--Sobic005G023600 Sobic002G029000 Sobic002G029000 Sobic001G024250--Sobic002G029000 Sobic001G024250--Sobic001G466100 Sobic006G096700 Sobic006G096700 Sobic001G024250--Sobic006G096700 Sobic010G176400--Sobic003G329600 Sobic010G141001 Sobic010G141001 Sobic010G176400--Sobic010G141001 Sobic003G255400 Sobic003G255400 Sobic010G176400--Sobic003G255400 Sobic004G222400 Sobic004G222400 Sobic010G176400--Sobic004G222400 Sobic001G539600 Sobic001G539600 Sobic010G176400--Sobic001G539600 Sobic008G099000 Sobic008G099000 Sobic010G176400--Sobic008G099000 Sobic010G176400--Sobic010G089900 Sobic010G176400--Sobic001G466100 Sobic002G273200 Sobic002G273200 Sobic010G176400--Sobic002G273200 Sobic006G105500--Sobic010G151575 Sobic006G105500--Sobic004G359900 Sobic006G105500--Sobic002G224000 Sobic006G105500--Sobic010G089900 Sobic006G105500--Sobic006G193700 Sobic004G197200 Sobic004G197200 Sobic006G105500--Sobic004G197200 Sobic001G539940 Sobic001G539940 Sobic006G105500--Sobic001G539940 Sobic002G007900 Sobic002G007900 Sobic006G105500--Sobic002G007900 Sobic006G105500--Sobic005G023600
Octagon: transcription factors


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