Gene annotation
Transcriptome id Sobic.001G024250.1
Synonym -
Functional annotation -
UniProt A0A1Z5S438
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G146300 pectinesterase, putative, expressed -
2 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
3 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.004G041800 expressed protein -
5 Sobic.005G209300 GRAS family transcription factor domain containing protein, expressed -
6 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
7 Sobic.002G029000 protein kinase, putative, expressed -
8 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
9 Sobic.006G096700 extracellular ligand-gated ion channel, putative, expressed -
10 Sobic.003G434100 - -
11 Sobic.007G166500 expansin precursor, putative, expressed -
12 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
13 Sobic.004G123100 ATROPGEF7/ROPGEF7, putative, expressed -
14 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
15 Sobic.002G323200 COBRA-like protein precursor, putative, expressed -
16 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.006G105500 pectinesterase, putative, expressed -
18 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
19 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.001G445400 expressed protein -


Gene co-expression network
sample Sobic001G024250 Sobic001G024250 Sobic007G146300 Sobic007G146300 Sobic001G024250--Sobic007G146300 Sobic004G080000 Sobic004G080000 Sobic001G024250--Sobic004G080000 Sobic010G276200 Sobic010G276200 Sobic001G024250--Sobic010G276200 Sobic004G041800 Sobic004G041800 Sobic001G024250--Sobic004G041800 Sobic005G209300 Sobic005G209300 Sobic001G024250--Sobic005G209300 Sobic005G023600 Sobic005G023600 Sobic001G024250--Sobic005G023600 Sobic002G029000 Sobic002G029000 Sobic001G024250--Sobic002G029000 Sobic001G466100 Sobic001G466100 Sobic001G024250--Sobic001G466100 Sobic006G096700 Sobic006G096700 Sobic001G024250--Sobic006G096700 Sobic007G146300--Sobic004G080000 Sobic007G146300--Sobic004G041800 Sobic007G146300--Sobic010G276200 Sobic007G146300--Sobic005G023600 Sobic007G146300--Sobic005G209300 Sobic007G146300--Sobic001G466100 Sobic007G146300--Sobic001G024250 Sobic010G176400 Sobic010G176400 Sobic007G146300--Sobic010G176400 Sobic006G105500 Sobic006G105500 Sobic007G146300--Sobic006G105500 Sobic004G080000--Sobic004G041800 Sobic004G080000--Sobic007G146300 Sobic004G080000--Sobic001G466100 Sobic004G080000--Sobic010G276200 Sobic004G080000--Sobic005G023600 Sobic004G080000--Sobic005G209300 Sobic004G080000--Sobic010G176400 Sobic004G123100 Sobic004G123100 Sobic004G080000--Sobic004G123100 Sobic003G329600 Sobic003G329600 Sobic004G080000--Sobic003G329600 Sobic010G276200--Sobic004G080000 Sobic010G276200--Sobic004G041800 Sobic010G276200--Sobic007G146300 Sobic010G276200--Sobic005G023600 Sobic010G276200--Sobic001G466100 Sobic010G276200--Sobic010G176400 Sobic010G276200--Sobic006G105500 Sobic010G276200--Sobic001G024250 Sobic010G089900 Sobic010G089900 Sobic010G276200--Sobic010G089900 Sobic004G041800--Sobic004G080000 Sobic004G041800--Sobic001G466100 Sobic004G041800--Sobic007G146300 Sobic004G041800--Sobic010G276200 Sobic004G041800--Sobic005G209300 Sobic010G034300 Sobic010G034300 Sobic004G041800--Sobic010G034300 Sobic004G041800--Sobic010G176400 Sobic009G252000 Sobic009G252000 Sobic004G041800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic004G041800--Sobic009G091000 Sobic005G209300--Sobic004G041800 Sobic005G209300--Sobic004G080000 Sobic004G331500 Sobic004G331500 Sobic005G209300--Sobic004G331500 Sobic005G209300--Sobic001G466100 Sobic005G209300--Sobic007G146300 Sobic005G209300--Sobic010G034300 Sobic009G165900 Sobic009G165900 Sobic005G209300--Sobic009G165900 Sobic009G166000 Sobic009G166000 Sobic005G209300--Sobic009G166000 Sobic010G254100 Sobic010G254100 Sobic005G209300--Sobic010G254100 Sobic006G193700 Sobic006G193700 Sobic005G023600--Sobic006G193700 Sobic005G023600--Sobic006G105500 Sobic004G359900 Sobic004G359900 Sobic005G023600--Sobic004G359900 Sobic010G151575 Sobic010G151575 Sobic005G023600--Sobic010G151575 Sobic005G023600--Sobic007G146300 Sobic005G023600--Sobic010G276200 Sobic005G023600--Sobic004G080000 Sobic005G023600--Sobic010G089900 Sobic002G224000 Sobic002G224000 Sobic005G023600--Sobic002G224000 Sobic007G166500 Sobic007G166500 Sobic002G029000--Sobic007G166500 Sobic003G434100 Sobic003G434100 Sobic002G029000--Sobic003G434100 Sobic002G323200 Sobic002G323200 Sobic002G029000--Sobic002G323200 Sobic002G029000--Sobic007G146300 Sobic002G029000--Sobic001G024250 Sobic002G029000--Sobic005G209300 Sobic002G029000--Sobic004G080000 Sobic002G029000--Sobic004G041800 Sobic009G072600 Sobic009G072600 Sobic002G029000--Sobic009G072600 Sobic001G466100--Sobic009G252000 Sobic001G466100--Sobic009G091000 Sobic001G466100--Sobic010G034300 Sobic001G466100--Sobic004G041800 Sobic001G466100--Sobic010G254100 Sobic008G097800 Sobic008G097800 Sobic001G466100--Sobic008G097800 Sobic007G221932 Sobic007G221932 Sobic001G466100--Sobic007G221932 Sobic001G036200 Sobic001G036200 Sobic001G466100--Sobic001G036200 Sobic001G466100--Sobic010G176400 Sobic006G096700--Sobic005G023600 Sobic006G096700--Sobic010G276200 Sobic006G096700--Sobic004G080000 Sobic006G096700--Sobic006G105500 Sobic006G096700--Sobic007G146300 Sobic006G096700--Sobic004G359900 Sobic006G096700--Sobic006G193700 Sobic006G096700--Sobic004G041800 Sobic006G096700--Sobic010G151575
Octagon: transcription factors


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