Gene annotation
Transcriptome id Sobic.007G166500.1
Synonym EXPA16, Sb07g023940, ATEXPA16, ATEXP16, EXP16, ATHEXPALPHA1.7
Functional annotation expansin precursor, putative, expressed
UniProt A0A1B6PI66
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55500 : expansin A16
RAP-DB (Rice) LOC_Os08g44790.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a005570 , Zm00025a005571 , Zm00025a005574
Brachypodium KQJ99400
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G029000 protein kinase, putative, expressed -
2 Sobic.003G434100 - -
3 Sobic.001G445400 expressed protein -
4 Sobic.001G152800 pollen preferential protein, putative, expressed -
5 Sobic.007G146300 pectinesterase, putative, expressed -
6 Sobic.002G323200 COBRA-like protein precursor, putative, expressed -
7 Sobic.001G024250 - -
8 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
9 Sobic.005G209300 GRAS family transcription factor domain containing protein, expressed -
10 Sobic.010G063700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
11 Sobic.009G072600 expressed protein -
12 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
13 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
14 Sobic.004G289100 OsSub20 - Putative Subtilisin homologue, expressed -
15 Sobic.004G041800 expressed protein -
16 Sobic.009G145750 - -
17 Sobic.010G016100 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
18 Sobic.001G121800 - -
19 Sobic.006G096700 extracellular ligand-gated ion channel, putative, expressed -
20 Sobic.004G123100 ATROPGEF7/ROPGEF7, putative, expressed -


Gene co-expression network
sample Sobic007G166500 Sobic007G166500 Sobic002G029000 Sobic002G029000 Sobic007G166500--Sobic002G029000 Sobic003G434100 Sobic003G434100 Sobic007G166500--Sobic003G434100 Sobic001G445400 Sobic001G445400 Sobic007G166500--Sobic001G445400 Sobic001G152800 Sobic001G152800 Sobic007G166500--Sobic001G152800 Sobic007G146300 Sobic007G146300 Sobic007G166500--Sobic007G146300 Sobic002G323200 Sobic002G323200 Sobic007G166500--Sobic002G323200 Sobic001G024250 Sobic001G024250 Sobic007G166500--Sobic001G024250 Sobic004G080000 Sobic004G080000 Sobic007G166500--Sobic004G080000 Sobic005G209300 Sobic005G209300 Sobic007G166500--Sobic005G209300 Sobic002G029000--Sobic007G166500 Sobic002G029000--Sobic003G434100 Sobic002G029000--Sobic002G323200 Sobic002G029000--Sobic007G146300 Sobic002G029000--Sobic001G024250 Sobic002G029000--Sobic005G209300 Sobic002G029000--Sobic004G080000 Sobic004G041800 Sobic004G041800 Sobic002G029000--Sobic004G041800 Sobic009G072600 Sobic009G072600 Sobic002G029000--Sobic009G072600 Sobic003G434100--Sobic007G166500 Sobic003G434100--Sobic002G029000 Sobic003G434100--Sobic002G323200 Sobic003G434100--Sobic009G072600 Sobic003G434100--Sobic007G146300 Sobic003G434100--Sobic001G024250 Sobic003G434100--Sobic001G445400 Sobic003G434100--Sobic005G209300 Sobic003G434100--Sobic001G152800 Sobic010G063700 Sobic010G063700 Sobic001G445400--Sobic010G063700 Sobic010G016100 Sobic010G016100 Sobic001G445400--Sobic010G016100 Sobic001G445400--Sobic001G152800 Sobic008G138100 Sobic008G138100 Sobic001G445400--Sobic008G138100 Sobic002G237100 Sobic002G237100 Sobic001G445400--Sobic002G237100 Sobic001G445400--Sobic007G166500 Sobic005G023600 Sobic005G023600 Sobic001G445400--Sobic005G023600 Sobic010G140700 Sobic010G140700 Sobic001G445400--Sobic010G140700 Sobic001G445400--Sobic007G146300 Sobic001G152800--Sobic001G445400 Sobic001G152800--Sobic010G016100 Sobic001G152800--Sobic007G166500 Sobic001G152800--Sobic010G063700 Sobic001G152800--Sobic008G138100 Sobic001G152800--Sobic003G434100 Sobic004G289100 Sobic004G289100 Sobic001G152800--Sobic004G289100 Sobic004G008500 Sobic004G008500 Sobic001G152800--Sobic004G008500 Sobic001G152800--Sobic002G029000 Sobic007G146300--Sobic004G080000 Sobic007G146300--Sobic004G041800 Sobic010G276200 Sobic010G276200 Sobic007G146300--Sobic010G276200 Sobic007G146300--Sobic005G023600 Sobic007G146300--Sobic005G209300 Sobic001G466100 Sobic001G466100 Sobic007G146300--Sobic001G466100 Sobic007G146300--Sobic001G024250 Sobic010G176400 Sobic010G176400 Sobic007G146300--Sobic010G176400 Sobic006G105500 Sobic006G105500 Sobic007G146300--Sobic006G105500 Sobic002G323200--Sobic009G072600 Sobic005G192000 Sobic005G192000 Sobic002G323200--Sobic005G192000 Sobic002G323200--Sobic002G029000 Sobic002G323200--Sobic005G209300 Sobic002G323200--Sobic003G434100 Sobic002G210150 Sobic002G210150 Sobic002G323200--Sobic002G210150 Sobic002G061732 Sobic002G061732 Sobic002G323200--Sobic002G061732 Sobic002G323200--Sobic007G166500 Sobic005G181500 Sobic005G181500 Sobic002G323200--Sobic005G181500 Sobic001G024250--Sobic007G146300 Sobic001G024250--Sobic004G080000 Sobic001G024250--Sobic010G276200 Sobic001G024250--Sobic004G041800 Sobic001G024250--Sobic005G209300 Sobic001G024250--Sobic005G023600 Sobic001G024250--Sobic002G029000 Sobic001G024250--Sobic001G466100 Sobic006G096700 Sobic006G096700 Sobic001G024250--Sobic006G096700 Sobic004G080000--Sobic004G041800 Sobic004G080000--Sobic007G146300 Sobic004G080000--Sobic001G466100 Sobic004G080000--Sobic010G276200 Sobic004G080000--Sobic005G023600 Sobic004G080000--Sobic005G209300 Sobic004G080000--Sobic010G176400 Sobic004G123100 Sobic004G123100 Sobic004G080000--Sobic004G123100 Sobic003G329600 Sobic003G329600 Sobic004G080000--Sobic003G329600 Sobic005G209300--Sobic004G041800 Sobic005G209300--Sobic004G080000 Sobic004G331500 Sobic004G331500 Sobic005G209300--Sobic004G331500 Sobic005G209300--Sobic001G466100 Sobic005G209300--Sobic007G146300 Sobic010G034300 Sobic010G034300 Sobic005G209300--Sobic010G034300 Sobic009G165900 Sobic009G165900 Sobic005G209300--Sobic009G165900 Sobic009G166000 Sobic009G166000 Sobic005G209300--Sobic009G166000 Sobic010G254100 Sobic010G254100 Sobic005G209300--Sobic010G254100
Octagon: transcription factors


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