Gene annotation
Transcriptome id Sobic.010G063700.3,Sobic.010G063700.2
Synonym HA6, AHA6, Sb10g005500
Functional annotation plasma membrane ATPase, putative, expressed
UniProt A0A1W0VRQ8
Pfam PF00690 PF00702 PF00122
Panther DB PTHR24093 PTHR24093:SF314
NCBI CDD -
KEGG Orthology K01535; PMA1, H+-transporting ATPase
Gene Ontology GO:0000166; nucleotide binding


Orthologs (automatic annotation)
TAIR AT2G07560 : H(+)-ATPase 6
RAP-DB (Rice) LOC_Os06g08310.1 : plasma membrane ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a030928 , Zm00025a057250 , Zm00025a049797 , Zm00025a032923 , Zm00025a051359 , Zm00025a000410 , Zm00025a042055 , Zm00025a000078
Brachypodium PNT69345 , PNT76376 , KQK23282 , KQK01162 , KQJ95742
Barley HORVU7Hr1G114340.10 , HORVU4Hr1G077430.1 , HORVU4Hr1G077430.3 , HORVU4Hr1G077430.2 , HORVU4Hr1G077430.4 , HORVU1Hr1G063560.31 , HORVU1Hr1G063560.30 , HORVU1Hr1G063560.6 , HORVU1Hr1G063560.9 , HORVU1Hr1G063560.8 , HORVU1Hr1G063560.3 , HORVU1Hr1G063560.2 , HORVU1Hr1G063560.1 , HORVU1Hr1G063560.7 , HORVU1Hr1G063560.5 , HORVU1Hr1G063560.4 , HORVU0Hr1G017350.8 , HORVU0Hr1G017350.9 , HORVU0Hr1G017350.6 , HORVU0Hr1G017350.7 , HORVU0Hr1G017350.4 , HORVU0Hr1G017350.5 , HORVU0Hr1G017350.2 , HORVU0Hr1G017350.3 , HORVU0Hr1G017350.1 , HORVU1Hr1G063560.22 , HORVU1Hr1G063560.23 , HORVU1Hr1G063560.20 , HORVU1Hr1G063560.21 , HORVU1Hr1G063560.26 , HORVU1Hr1G063560.27 , HORVU1Hr1G063560.24 , HORVU1Hr1G063560.25 , HORVU1Hr1G063560.28 , HORVU1Hr1G063560.29 , HORVU7Hr1G114340.8 , HORVU7Hr1G114340.9 , HORVU7Hr1G114340.4 , HORVU7Hr1G114340.5 , HORVU7Hr1G114340.6 , HORVU7Hr1G114340.7 , HORVU7Hr1G114340.1 , HORVU7Hr1G114340.2 , HORVU7Hr1G114340.3 , HORVU1Hr1G063560.19 , HORVU1Hr1G063560.18 , HORVU1Hr1G063560.13 , HORVU1Hr1G063560.12 , HORVU1Hr1G063560.11 , HORVU1Hr1G063560.10 , HORVU1Hr1G063560.17 , HORVU1Hr1G063560.16 , HORVU1Hr1G063560.15 , HORVU1Hr1G063560.14
Wheat TraesCS4B02G300000 , TraesCS4B02G300000 , TraesCS1B02G268800 , TraesCS7D02G146700 , TraesCS6B02G393400 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4A02G005000 , TraesCS1A02G258300 , TraesCS7D02G500200 , TraesCS7A02G145400 , TraesCSU02G073200 , TraesCS4B02G376400 , TraesCS6D02G344000 , TraesCS7B02G421700 , TraesCS4A02G005000 , TraesCS5A02G543300 , TraesCS5A02G004200 , TraesCS7A02G510800 , TraesCS7B02G047600 , TraesCS5A02G004300 , TraesCS1D02G257600 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCS6A02G360500 , TraesCS5D02G013100 , TraesCS5D02G013100
Populus -


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cDNA sequences
Sobic.010G063700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G016100 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
2 Sobic.001G445400 expressed protein -
3 Sobic.008G138100 exostosin family domain containing protein, expressed -
4 Sobic.010G140700 peroxidase precursor, putative, expressed -
5 Sobic.002G237100 - -
6 Sobic.006G193700 DUF581 domain containing protein, expressed -
7 Sobic.005G212900 IWS1 homolog A, putative, expressed -
8 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
9 Sobic.001G152800 pollen preferential protein, putative, expressed -
10 Sobic.010G246132 - -
11 Sobic.004G359900 expressed protein -
12 Sobic.006G105500 pectinesterase, putative, expressed -
13 Sobic.004G008500 - -
14 Sobic.007G146300 pectinesterase, putative, expressed -
15 Sobic.007G166500 expansin precursor, putative, expressed -
16 Sobic.009G133000 expressed protein -
17 Sobic.010G151575 - -
18 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.002G006700 expressed protein -
20 Sobic.006G096700 extracellular ligand-gated ion channel, putative, expressed -


Gene co-expression network
sample Sobic010G063700 Sobic010G063700 Sobic010G016100 Sobic010G016100 Sobic010G063700--Sobic010G016100 Sobic001G445400 Sobic001G445400 Sobic010G063700--Sobic001G445400 Sobic008G138100 Sobic008G138100 Sobic010G063700--Sobic008G138100 Sobic010G140700 Sobic010G140700 Sobic010G063700--Sobic010G140700 Sobic002G237100 Sobic002G237100 Sobic010G063700--Sobic002G237100 Sobic006G193700 Sobic006G193700 Sobic010G063700--Sobic006G193700 Sobic005G212900 Sobic005G212900 Sobic010G063700--Sobic005G212900 Sobic005G023600 Sobic005G023600 Sobic010G063700--Sobic005G023600 Sobic001G152800 Sobic001G152800 Sobic010G063700--Sobic001G152800 Sobic010G016100--Sobic008G138100 Sobic010G016100--Sobic010G063700 Sobic010G016100--Sobic001G445400 Sobic010G016100--Sobic010G140700 Sobic010G016100--Sobic002G237100 Sobic010G016100--Sobic001G152800 Sobic010G016100--Sobic005G212900 Sobic004G180200 Sobic004G180200 Sobic010G016100--Sobic004G180200 Sobic003G322000 Sobic003G322000 Sobic010G016100--Sobic003G322000 Sobic001G445400--Sobic010G063700 Sobic001G445400--Sobic010G016100 Sobic001G445400--Sobic001G152800 Sobic001G445400--Sobic008G138100 Sobic001G445400--Sobic002G237100 Sobic007G166500 Sobic007G166500 Sobic001G445400--Sobic007G166500 Sobic001G445400--Sobic005G023600 Sobic001G445400--Sobic010G140700 Sobic007G146300 Sobic007G146300 Sobic001G445400--Sobic007G146300 Sobic008G138100--Sobic010G016100 Sobic008G138100--Sobic010G140700 Sobic008G138100--Sobic002G237100 Sobic008G138100--Sobic010G063700 Sobic008G138100--Sobic001G445400 Sobic008G138100--Sobic003G322000 Sobic008G138100--Sobic005G212900 Sobic008G138100--Sobic004G180200 Sobic009G133000 Sobic009G133000 Sobic008G138100--Sobic009G133000 Sobic010G140700--Sobic002G237100 Sobic010G140700--Sobic005G212900 Sobic010G140700--Sobic008G138100 Sobic002G006700 Sobic002G006700 Sobic010G140700--Sobic002G006700 Sobic010G140700--Sobic009G133000 Sobic010G140700--Sobic010G016100 Sobic001G249100 Sobic001G249100 Sobic010G140700--Sobic001G249100 Sobic002G210700 Sobic002G210700 Sobic010G140700--Sobic002G210700 Sobic002G236800 Sobic002G236800 Sobic010G140700--Sobic002G236800 Sobic002G237100--Sobic005G212900 Sobic002G237100--Sobic010G140700 Sobic002G237100--Sobic008G138100 Sobic002G237100--Sobic002G006700 Sobic002G237100--Sobic002G210700 Sobic002G237100--Sobic006G193700 Sobic002G237100--Sobic009G133000 Sobic004G359900 Sobic004G359900 Sobic002G237100--Sobic004G359900 Sobic002G237100--Sobic010G016100 Sobic006G193700--Sobic004G359900 Sobic006G105500 Sobic006G105500 Sobic006G193700--Sobic006G105500 Sobic010G151575 Sobic010G151575 Sobic006G193700--Sobic010G151575 Sobic006G193700--Sobic005G023600 Sobic002G224000 Sobic002G224000 Sobic006G193700--Sobic002G224000 Sobic006G193700--Sobic005G212900 Sobic004G197200 Sobic004G197200 Sobic006G193700--Sobic004G197200 Sobic002G121800 Sobic002G121800 Sobic006G193700--Sobic002G121800 Sobic002G007900 Sobic002G007900 Sobic006G193700--Sobic002G007900 Sobic005G212900--Sobic002G006700 Sobic005G212900--Sobic002G210700 Sobic005G212900--Sobic002G237100 Sobic004G011800 Sobic004G011800 Sobic005G212900--Sobic004G011800 Sobic005G212900--Sobic010G140700 Sobic005G213000 Sobic005G213000 Sobic005G212900--Sobic005G213000 Sobic005G212900--Sobic002G121800 Sobic005G212900--Sobic001G249100 Sobic005G212900--Sobic004G359900 Sobic005G023600--Sobic006G193700 Sobic005G023600--Sobic006G105500 Sobic005G023600--Sobic004G359900 Sobic005G023600--Sobic010G151575 Sobic005G023600--Sobic007G146300 Sobic010G276200 Sobic010G276200 Sobic005G023600--Sobic010G276200 Sobic004G080000 Sobic004G080000 Sobic005G023600--Sobic004G080000 Sobic010G089900 Sobic010G089900 Sobic005G023600--Sobic010G089900 Sobic005G023600--Sobic002G224000 Sobic001G152800--Sobic001G445400 Sobic001G152800--Sobic010G016100 Sobic001G152800--Sobic007G166500 Sobic001G152800--Sobic010G063700 Sobic001G152800--Sobic008G138100 Sobic003G434100 Sobic003G434100 Sobic001G152800--Sobic003G434100 Sobic004G289100 Sobic004G289100 Sobic001G152800--Sobic004G289100 Sobic004G008500 Sobic004G008500 Sobic001G152800--Sobic004G008500 Sobic002G029000 Sobic002G029000 Sobic001G152800--Sobic002G029000
Octagon: transcription factors


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