Gene annotation
Transcriptome id Sobic.006G105500.1
Synonym Sb06g018850
Functional annotation pectinesterase, putative, expressed
UniProt C5Y9T6
Pfam PF04043 PF01095
Panther DB PTHR31707 PTHR31707:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity GO:0005618cell wall


Orthologs (automatic annotation)
TAIR AT3G05610 : Plant invertase/pectin methylesterase inhibitor superfamily
RAP-DB (Rice) LOC_Os04g38560.1 : pectinesterase, putative, expressed
MaizeGDB (Corn) Zm00025a024331 , Zm00025a057169 , Zm00025a013953 , Zm00025a009587 , Zm00025a049244 , Zm00025a011132 , Zm00025a056197
Brachypodium KQK06705 , KQK04129 , KQK14510 , KQJ84896 , KQJ82959
Barley HORVU2Hr1G015620.1 , HORVU5Hr1G063260.2 , HORVU5Hr1G063260.3 , HORVU2Hr1G080170.1 , HORVU5Hr1G060490.1 , HORVU4Hr1G054860.1 , HORVU2Hr1G115290.1 , HORVU2Hr1G115290.2 , HORVU2Hr1G115290.3 , HORVU2Hr1G115290.4 , HORVU2Hr1G115290.5 , HORVU1Hr1G063710.1 , HORVU1Hr1G063710.2 , HORVU1Hr1G063710.3 , HORVU1Hr1G063710.4 , HORVU5Hr1G059120.2 , HORVU5Hr1G059120.1 , HORVU1Hr1G059010.3 , HORVU1Hr1G059010.1
Wheat TraesCS1D02G230800 , TraesCS2B02G551400 , TraesCS5A02G216500 , TraesCS2A02G092800 , TraesCS5D02G224600 , TraesCS2B02G341700 , TraesCS2A02G344200 , TraesCS1D02G264000 , TraesCS1B02G243000 , TraesCS2D02G322500 , TraesCS1A02G263900 , TraesCS5B02G215400 , TraesCS2A02G521900 , TraesCS2D02G317900 , TraesCS2B02G107500 , TraesCS2D02G523700 , TraesCS1B02G274500 , TraesCS2D02G091800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G151575 - -
2 Sobic.004G359900 expressed protein -
3 Sobic.002G224000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
4 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.006G193700 DUF581 domain containing protein, expressed -
6 Sobic.004G197200 fimbrin-like protein 2, putative, expressed -
7 Sobic.001G539940 - -
8 Sobic.002G007900 - -
9 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
10 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
11 Sobic.002G121800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
12 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.001G539600 expansin precursor, putative, expressed -
14 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
15 Sobic.003G255400 glyoxal oxidase-related, putative, expressed -
16 Sobic.004G334900 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7
17 Sobic.005G212900 IWS1 homolog A, putative, expressed -
18 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.010G141001 - -
20 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase


Gene co-expression network
sample Sobic006G105500 Sobic006G105500 Sobic010G151575 Sobic010G151575 Sobic006G105500--Sobic010G151575 Sobic004G359900 Sobic004G359900 Sobic006G105500--Sobic004G359900 Sobic002G224000 Sobic002G224000 Sobic006G105500--Sobic002G224000 Sobic010G089900 Sobic010G089900 Sobic006G105500--Sobic010G089900 Sobic006G193700 Sobic006G193700 Sobic006G105500--Sobic006G193700 Sobic004G197200 Sobic004G197200 Sobic006G105500--Sobic004G197200 Sobic001G539940 Sobic001G539940 Sobic006G105500--Sobic001G539940 Sobic002G007900 Sobic002G007900 Sobic006G105500--Sobic002G007900 Sobic005G023600 Sobic005G023600 Sobic006G105500--Sobic005G023600 Sobic010G151575--Sobic004G359900 Sobic010G151575--Sobic006G105500 Sobic010G151575--Sobic002G224000 Sobic010G151575--Sobic004G197200 Sobic010G151575--Sobic001G539940 Sobic010G151575--Sobic010G089900 Sobic010G151575--Sobic002G007900 Sobic010G151575--Sobic006G193700 Sobic002G121800 Sobic002G121800 Sobic010G151575--Sobic002G121800 Sobic004G359900--Sobic010G151575 Sobic004G359900--Sobic006G105500 Sobic004G359900--Sobic002G224000 Sobic004G359900--Sobic004G197200 Sobic004G359900--Sobic006G193700 Sobic004G359900--Sobic002G007900 Sobic004G359900--Sobic002G121800 Sobic004G359900--Sobic001G539940 Sobic004G359900--Sobic010G089900 Sobic002G224000--Sobic004G197200 Sobic002G224000--Sobic001G539940 Sobic002G224000--Sobic002G007900 Sobic002G224000--Sobic010G151575 Sobic002G224000--Sobic004G359900 Sobic002G224000--Sobic006G105500 Sobic002G224000--Sobic010G089900 Sobic002G224000--Sobic002G121800 Sobic002G273200 Sobic002G273200 Sobic002G224000--Sobic002G273200 Sobic003G329600 Sobic003G329600 Sobic010G089900--Sobic003G329600 Sobic001G539600 Sobic001G539600 Sobic010G089900--Sobic001G539600 Sobic010G176400 Sobic010G176400 Sobic010G089900--Sobic010G176400 Sobic003G255400 Sobic003G255400 Sobic010G089900--Sobic003G255400 Sobic010G089900--Sobic001G539940 Sobic010G089900--Sobic002G224000 Sobic010G089900--Sobic010G151575 Sobic010G089900--Sobic006G105500 Sobic010G089900--Sobic002G273200 Sobic006G193700--Sobic004G359900 Sobic006G193700--Sobic006G105500 Sobic006G193700--Sobic010G151575 Sobic006G193700--Sobic005G023600 Sobic006G193700--Sobic002G224000 Sobic005G212900 Sobic005G212900 Sobic006G193700--Sobic005G212900 Sobic006G193700--Sobic004G197200 Sobic006G193700--Sobic002G121800 Sobic006G193700--Sobic002G007900 Sobic004G197200--Sobic002G007900 Sobic004G197200--Sobic002G224000 Sobic004G197200--Sobic001G539940 Sobic004G197200--Sobic010G151575 Sobic004G197200--Sobic002G121800 Sobic004G197200--Sobic004G359900 Sobic004G197200--Sobic006G105500 Sobic004G197200--Sobic010G089900 Sobic004G197200--Sobic002G273200 Sobic001G539940--Sobic002G007900 Sobic001G539940--Sobic002G224000 Sobic001G539940--Sobic004G197200 Sobic001G539940--Sobic010G151575 Sobic001G539940--Sobic010G089900 Sobic001G539940--Sobic001G539600 Sobic001G539940--Sobic002G273200 Sobic001G539940--Sobic003G255400 Sobic001G539940--Sobic006G105500 Sobic002G007900--Sobic004G197200 Sobic002G007900--Sobic001G539940 Sobic002G007900--Sobic002G224000 Sobic002G007900--Sobic002G121800 Sobic002G007900--Sobic010G151575 Sobic002G007900--Sobic004G359900 Sobic002G007900--Sobic006G105500 Sobic002G007900--Sobic010G089900 Sobic002G007900--Sobic002G273200 Sobic005G023600--Sobic006G193700 Sobic005G023600--Sobic006G105500 Sobic005G023600--Sobic004G359900 Sobic005G023600--Sobic010G151575 Sobic007G146300 Sobic007G146300 Sobic005G023600--Sobic007G146300 Sobic010G276200 Sobic010G276200 Sobic005G023600--Sobic010G276200 Sobic004G080000 Sobic004G080000 Sobic005G023600--Sobic004G080000 Sobic005G023600--Sobic010G089900 Sobic005G023600--Sobic002G224000
Octagon: transcription factors


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