Gene annotation
Transcriptome id Sobic.001G539940.1
Synonym -
Functional annotation -
UniProt C5WMS5
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os03g01610.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051980 , Zm00025a021677 , Zm00025a021679 , Zm00025a021678 , Zm00025a003332 , Zm00025a003331 , Zm00025a024285 , Zm00025a024287 , Zm00025a021682 , Zm00025a021683 , Zm00025a021680 , Zm00025a021681
Brachypodium -
Barley HORVU0Hr1G005490.1
Wheat TraesCS3A02G011100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G007900 - -
2 Sobic.002G224000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
3 Sobic.004G197200 fimbrin-like protein 2, putative, expressed -
4 Sobic.010G151575 - -
5 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
6 Sobic.001G539600 expansin precursor, putative, expressed -
7 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
8 Sobic.003G255400 glyoxal oxidase-related, putative, expressed -
9 Sobic.006G105500 pectinesterase, putative, expressed -
10 Sobic.004G359900 expressed protein -
11 Sobic.002G121800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
12 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
14 Sobic.010G141001 - -
15 Sobic.004G222400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
16 Sobic.006G193700 DUF581 domain containing protein, expressed -
17 Sobic.008G099000 protein of unknown function domain containing protein, expressed -
18 Sobic.009G096433 - -
19 Sobic.005G213000 - -
20 Sobic.004G334900 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7


Gene co-expression network
sample Sobic001G539940 Sobic001G539940 Sobic002G007900 Sobic002G007900 Sobic001G539940--Sobic002G007900 Sobic002G224000 Sobic002G224000 Sobic001G539940--Sobic002G224000 Sobic004G197200 Sobic004G197200 Sobic001G539940--Sobic004G197200 Sobic010G151575 Sobic010G151575 Sobic001G539940--Sobic010G151575 Sobic010G089900 Sobic010G089900 Sobic001G539940--Sobic010G089900 Sobic001G539600 Sobic001G539600 Sobic001G539940--Sobic001G539600 Sobic002G273200 Sobic002G273200 Sobic001G539940--Sobic002G273200 Sobic003G255400 Sobic003G255400 Sobic001G539940--Sobic003G255400 Sobic006G105500 Sobic006G105500 Sobic001G539940--Sobic006G105500 Sobic002G007900--Sobic004G197200 Sobic002G007900--Sobic001G539940 Sobic002G007900--Sobic002G224000 Sobic002G121800 Sobic002G121800 Sobic002G007900--Sobic002G121800 Sobic002G007900--Sobic010G151575 Sobic004G359900 Sobic004G359900 Sobic002G007900--Sobic004G359900 Sobic002G007900--Sobic006G105500 Sobic002G007900--Sobic010G089900 Sobic002G007900--Sobic002G273200 Sobic002G224000--Sobic004G197200 Sobic002G224000--Sobic001G539940 Sobic002G224000--Sobic002G007900 Sobic002G224000--Sobic010G151575 Sobic002G224000--Sobic004G359900 Sobic002G224000--Sobic006G105500 Sobic002G224000--Sobic010G089900 Sobic002G224000--Sobic002G121800 Sobic002G224000--Sobic002G273200 Sobic004G197200--Sobic002G007900 Sobic004G197200--Sobic002G224000 Sobic004G197200--Sobic001G539940 Sobic004G197200--Sobic010G151575 Sobic004G197200--Sobic002G121800 Sobic004G197200--Sobic004G359900 Sobic004G197200--Sobic006G105500 Sobic004G197200--Sobic010G089900 Sobic004G197200--Sobic002G273200 Sobic010G151575--Sobic004G359900 Sobic010G151575--Sobic006G105500 Sobic010G151575--Sobic002G224000 Sobic010G151575--Sobic004G197200 Sobic010G151575--Sobic001G539940 Sobic010G151575--Sobic010G089900 Sobic010G151575--Sobic002G007900 Sobic006G193700 Sobic006G193700 Sobic010G151575--Sobic006G193700 Sobic010G151575--Sobic002G121800 Sobic003G329600 Sobic003G329600 Sobic010G089900--Sobic003G329600 Sobic010G089900--Sobic001G539600 Sobic010G176400 Sobic010G176400 Sobic010G089900--Sobic010G176400 Sobic010G089900--Sobic003G255400 Sobic010G089900--Sobic001G539940 Sobic010G089900--Sobic002G224000 Sobic010G089900--Sobic010G151575 Sobic010G089900--Sobic006G105500 Sobic010G089900--Sobic002G273200 Sobic001G539600--Sobic003G255400 Sobic001G539600--Sobic003G329600 Sobic010G141001 Sobic010G141001 Sobic001G539600--Sobic010G141001 Sobic001G539600--Sobic010G176400 Sobic001G539600--Sobic010G089900 Sobic001G539600--Sobic002G273200 Sobic004G222400 Sobic004G222400 Sobic001G539600--Sobic004G222400 Sobic001G539600--Sobic001G539940 Sobic008G099000 Sobic008G099000 Sobic001G539600--Sobic008G099000 Sobic002G273200--Sobic001G539600 Sobic002G273200--Sobic003G255400 Sobic002G273200--Sobic001G539940 Sobic002G273200--Sobic010G089900 Sobic002G273200--Sobic003G329600 Sobic002G273200--Sobic010G141001 Sobic002G273200--Sobic002G224000 Sobic002G273200--Sobic010G176400 Sobic002G273200--Sobic004G197200 Sobic003G255400--Sobic001G539600 Sobic003G255400--Sobic010G141001 Sobic003G255400--Sobic003G329600 Sobic003G255400--Sobic010G176400 Sobic003G255400--Sobic004G222400 Sobic003G255400--Sobic010G089900 Sobic003G255400--Sobic002G273200 Sobic003G255400--Sobic008G099000 Sobic003G255400--Sobic001G539940 Sobic006G105500--Sobic010G151575 Sobic006G105500--Sobic004G359900 Sobic006G105500--Sobic002G224000 Sobic006G105500--Sobic010G089900 Sobic006G105500--Sobic006G193700 Sobic006G105500--Sobic004G197200 Sobic006G105500--Sobic001G539940 Sobic006G105500--Sobic002G007900 Sobic005G023600 Sobic005G023600 Sobic006G105500--Sobic005G023600
Octagon: transcription factors


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