Gene annotation
Transcriptome id Sobic.004G197200.1
Synonym Sb04g024410, FIM2
Functional annotation fimbrin-like protein 2, putative, expressed
UniProt C5XWE1
Pfam PF00307
Panther DB PTHR19961 PTHR19961:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G35700 : fimbrin-like protein 2
RAP-DB (Rice) LOC_Os02g37580.1 : fimbrin-like protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a021361 , Zm00025a032587
Brachypodium KQK00094 , PNT68937 , PNT68938 , PNT68939 , PNT68941 , PNT68940 , PNT68943 , PNT68942 , PNT68945 , PNT68944 , KQK00093
Barley HORVU6Hr1G052360.10 , HORVU6Hr1G052360.11 , HORVU6Hr1G052360.12 , HORVU6Hr1G052360.13 , HORVU6Hr1G052360.14 , HORVU6Hr1G052360.15 , HORVU6Hr1G052360.16 , HORVU6Hr1G052360.17 , HORVU6Hr1G052360.18 , HORVU6Hr1G052360.19 , HORVU6Hr1G052360.25 , HORVU6Hr1G052360.24 , HORVU6Hr1G052360.29 , HORVU6Hr1G052360.28 , HORVU6Hr1G052360.32 , HORVU6Hr1G052360.33 , HORVU6Hr1G052360.30 , HORVU6Hr1G052360.31 , HORVU6Hr1G052360.34 , HORVU6Hr1G052360.2 , HORVU6Hr1G052360.1 , HORVU6Hr1G052360.6 , HORVU6Hr1G052360.4 , HORVU6Hr1G052360.27 , HORVU6Hr1G052360.26 , HORVU6Hr1G052360.21 , HORVU6Hr1G052360.20 , HORVU6Hr1G052360.23 , HORVU6Hr1G052360.22
Wheat TraesCS6B02G226800 , TraesCS6D02G186700 , TraesCS6A02G200800 , TraesCS6A02G200800 , TraesCS6A02G200700 , TraesCS6D02G189200 , TraesCS6D02G189200 , TraesCS6B02G226900
Populus PNT51602 , PNT12454 , PNT12455


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G007900 - -
2 Sobic.002G224000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
3 Sobic.001G539940 - -
4 Sobic.010G151575 - -
5 Sobic.002G121800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
6 Sobic.004G359900 expressed protein -
7 Sobic.006G105500 pectinesterase, putative, expressed -
8 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
9 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
10 Sobic.001G539600 expansin precursor, putative, expressed -
11 Sobic.003G255400 glyoxal oxidase-related, putative, expressed -
12 Sobic.005G213000 - -
13 Sobic.006G193700 DUF581 domain containing protein, expressed -
14 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.010G257700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
16 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
17 Sobic.010G141001 - -
18 Sobic.005G212900 IWS1 homolog A, putative, expressed -
19 Sobic.004G011800 - -
20 Sobic.002G210700 pectinesterase, putative, expressed -


Gene co-expression network
sample Sobic004G197200 Sobic004G197200 Sobic002G007900 Sobic002G007900 Sobic004G197200--Sobic002G007900 Sobic002G224000 Sobic002G224000 Sobic004G197200--Sobic002G224000 Sobic001G539940 Sobic001G539940 Sobic004G197200--Sobic001G539940 Sobic010G151575 Sobic010G151575 Sobic004G197200--Sobic010G151575 Sobic002G121800 Sobic002G121800 Sobic004G197200--Sobic002G121800 Sobic004G359900 Sobic004G359900 Sobic004G197200--Sobic004G359900 Sobic006G105500 Sobic006G105500 Sobic004G197200--Sobic006G105500 Sobic010G089900 Sobic010G089900 Sobic004G197200--Sobic010G089900 Sobic002G273200 Sobic002G273200 Sobic004G197200--Sobic002G273200 Sobic002G007900--Sobic004G197200 Sobic002G007900--Sobic001G539940 Sobic002G007900--Sobic002G224000 Sobic002G007900--Sobic002G121800 Sobic002G007900--Sobic010G151575 Sobic002G007900--Sobic004G359900 Sobic002G007900--Sobic006G105500 Sobic002G007900--Sobic010G089900 Sobic002G007900--Sobic002G273200 Sobic002G224000--Sobic004G197200 Sobic002G224000--Sobic001G539940 Sobic002G224000--Sobic002G007900 Sobic002G224000--Sobic010G151575 Sobic002G224000--Sobic004G359900 Sobic002G224000--Sobic006G105500 Sobic002G224000--Sobic010G089900 Sobic002G224000--Sobic002G121800 Sobic002G224000--Sobic002G273200 Sobic001G539940--Sobic002G007900 Sobic001G539940--Sobic002G224000 Sobic001G539940--Sobic004G197200 Sobic001G539940--Sobic010G151575 Sobic001G539940--Sobic010G089900 Sobic001G539600 Sobic001G539600 Sobic001G539940--Sobic001G539600 Sobic001G539940--Sobic002G273200 Sobic003G255400 Sobic003G255400 Sobic001G539940--Sobic003G255400 Sobic001G539940--Sobic006G105500 Sobic010G151575--Sobic004G359900 Sobic010G151575--Sobic006G105500 Sobic010G151575--Sobic002G224000 Sobic010G151575--Sobic004G197200 Sobic010G151575--Sobic001G539940 Sobic010G151575--Sobic010G089900 Sobic010G151575--Sobic002G007900 Sobic006G193700 Sobic006G193700 Sobic010G151575--Sobic006G193700 Sobic010G151575--Sobic002G121800 Sobic005G213000 Sobic005G213000 Sobic002G121800--Sobic005G213000 Sobic002G121800--Sobic004G197200 Sobic002G121800--Sobic002G007900 Sobic002G121800--Sobic002G224000 Sobic002G121800--Sobic004G359900 Sobic002G210700 Sobic002G210700 Sobic002G121800--Sobic002G210700 Sobic004G011800 Sobic004G011800 Sobic002G121800--Sobic004G011800 Sobic002G121800--Sobic010G151575 Sobic002G121800--Sobic001G539940 Sobic004G359900--Sobic010G151575 Sobic004G359900--Sobic006G105500 Sobic004G359900--Sobic002G224000 Sobic004G359900--Sobic004G197200 Sobic004G359900--Sobic006G193700 Sobic004G359900--Sobic002G007900 Sobic004G359900--Sobic002G121800 Sobic004G359900--Sobic001G539940 Sobic004G359900--Sobic010G089900 Sobic006G105500--Sobic010G151575 Sobic006G105500--Sobic004G359900 Sobic006G105500--Sobic002G224000 Sobic006G105500--Sobic010G089900 Sobic006G105500--Sobic006G193700 Sobic006G105500--Sobic004G197200 Sobic006G105500--Sobic001G539940 Sobic006G105500--Sobic002G007900 Sobic005G023600 Sobic005G023600 Sobic006G105500--Sobic005G023600 Sobic003G329600 Sobic003G329600 Sobic010G089900--Sobic003G329600 Sobic010G089900--Sobic001G539600 Sobic010G176400 Sobic010G176400 Sobic010G089900--Sobic010G176400 Sobic010G089900--Sobic003G255400 Sobic010G089900--Sobic001G539940 Sobic010G089900--Sobic002G224000 Sobic010G089900--Sobic010G151575 Sobic010G089900--Sobic006G105500 Sobic010G089900--Sobic002G273200 Sobic002G273200--Sobic001G539600 Sobic002G273200--Sobic003G255400 Sobic002G273200--Sobic001G539940 Sobic002G273200--Sobic010G089900 Sobic002G273200--Sobic003G329600 Sobic010G141001 Sobic010G141001 Sobic002G273200--Sobic010G141001 Sobic002G273200--Sobic002G224000 Sobic002G273200--Sobic010G176400 Sobic002G273200--Sobic004G197200
Octagon: transcription factors


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