Gene annotation
Transcriptome id Sobic.006G193700.1
Synonym Sb06g026650
Functional annotation DUF581 domain containing protein, expressed
UniProt C5YEM2
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47060 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os04g49650.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010049
Brachypodium KQJ84255
Barley HORVU2Hr1G104950.1 , HORVU2Hr1G104950.3 , HORVU2Hr1G104950.2 , HORVU2Hr1G104960.1
Wheat TraesCS2A02G454800 , TraesCS2D02G455100 , TraesCS2B02G476700 , TraesCS2B02G476800 , TraesCS2D02G455000
Populus -


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cDNA sequences
Sobic.006G193700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G359900 expressed protein -
2 Sobic.006G105500 pectinesterase, putative, expressed -
3 Sobic.010G151575 - -
4 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
5 Sobic.002G224000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
6 Sobic.005G212900 IWS1 homolog A, putative, expressed -
7 Sobic.004G197200 fimbrin-like protein 2, putative, expressed -
8 Sobic.002G121800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
9 Sobic.002G007900 - -
10 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
11 Sobic.001G539940 - -
12 Sobic.002G237100 - -
13 Sobic.010G246132 - -
14 Sobic.004G334900 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7
15 Sobic.005G213000 - -
16 Sobic.002G210700 pectinesterase, putative, expressed -
17 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
18 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
19 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
20 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic006G193700 Sobic006G193700 Sobic004G359900 Sobic004G359900 Sobic006G193700--Sobic004G359900 Sobic006G105500 Sobic006G105500 Sobic006G193700--Sobic006G105500 Sobic010G151575 Sobic010G151575 Sobic006G193700--Sobic010G151575 Sobic005G023600 Sobic005G023600 Sobic006G193700--Sobic005G023600 Sobic002G224000 Sobic002G224000 Sobic006G193700--Sobic002G224000 Sobic005G212900 Sobic005G212900 Sobic006G193700--Sobic005G212900 Sobic004G197200 Sobic004G197200 Sobic006G193700--Sobic004G197200 Sobic002G121800 Sobic002G121800 Sobic006G193700--Sobic002G121800 Sobic002G007900 Sobic002G007900 Sobic006G193700--Sobic002G007900 Sobic004G359900--Sobic010G151575 Sobic004G359900--Sobic006G105500 Sobic004G359900--Sobic002G224000 Sobic004G359900--Sobic004G197200 Sobic004G359900--Sobic006G193700 Sobic004G359900--Sobic002G007900 Sobic004G359900--Sobic002G121800 Sobic001G539940 Sobic001G539940 Sobic004G359900--Sobic001G539940 Sobic010G089900 Sobic010G089900 Sobic004G359900--Sobic010G089900 Sobic006G105500--Sobic010G151575 Sobic006G105500--Sobic004G359900 Sobic006G105500--Sobic002G224000 Sobic006G105500--Sobic010G089900 Sobic006G105500--Sobic006G193700 Sobic006G105500--Sobic004G197200 Sobic006G105500--Sobic001G539940 Sobic006G105500--Sobic002G007900 Sobic006G105500--Sobic005G023600 Sobic010G151575--Sobic004G359900 Sobic010G151575--Sobic006G105500 Sobic010G151575--Sobic002G224000 Sobic010G151575--Sobic004G197200 Sobic010G151575--Sobic001G539940 Sobic010G151575--Sobic010G089900 Sobic010G151575--Sobic002G007900 Sobic010G151575--Sobic006G193700 Sobic010G151575--Sobic002G121800 Sobic005G023600--Sobic006G193700 Sobic005G023600--Sobic006G105500 Sobic005G023600--Sobic004G359900 Sobic005G023600--Sobic010G151575 Sobic007G146300 Sobic007G146300 Sobic005G023600--Sobic007G146300 Sobic010G276200 Sobic010G276200 Sobic005G023600--Sobic010G276200 Sobic004G080000 Sobic004G080000 Sobic005G023600--Sobic004G080000 Sobic005G023600--Sobic010G089900 Sobic005G023600--Sobic002G224000 Sobic002G224000--Sobic004G197200 Sobic002G224000--Sobic001G539940 Sobic002G224000--Sobic002G007900 Sobic002G224000--Sobic010G151575 Sobic002G224000--Sobic004G359900 Sobic002G224000--Sobic006G105500 Sobic002G224000--Sobic010G089900 Sobic002G224000--Sobic002G121800 Sobic002G273200 Sobic002G273200 Sobic002G224000--Sobic002G273200 Sobic002G006700 Sobic002G006700 Sobic005G212900--Sobic002G006700 Sobic002G210700 Sobic002G210700 Sobic005G212900--Sobic002G210700 Sobic002G237100 Sobic002G237100 Sobic005G212900--Sobic002G237100 Sobic004G011800 Sobic004G011800 Sobic005G212900--Sobic004G011800 Sobic010G140700 Sobic010G140700 Sobic005G212900--Sobic010G140700 Sobic005G213000 Sobic005G213000 Sobic005G212900--Sobic005G213000 Sobic005G212900--Sobic002G121800 Sobic001G249100 Sobic001G249100 Sobic005G212900--Sobic001G249100 Sobic005G212900--Sobic004G359900 Sobic004G197200--Sobic002G007900 Sobic004G197200--Sobic002G224000 Sobic004G197200--Sobic001G539940 Sobic004G197200--Sobic010G151575 Sobic004G197200--Sobic002G121800 Sobic004G197200--Sobic004G359900 Sobic004G197200--Sobic006G105500 Sobic004G197200--Sobic010G089900 Sobic004G197200--Sobic002G273200 Sobic002G121800--Sobic005G213000 Sobic002G121800--Sobic004G197200 Sobic002G121800--Sobic002G007900 Sobic002G121800--Sobic002G224000 Sobic002G121800--Sobic004G359900 Sobic002G121800--Sobic002G210700 Sobic002G121800--Sobic004G011800 Sobic002G121800--Sobic010G151575 Sobic002G121800--Sobic001G539940 Sobic002G007900--Sobic004G197200 Sobic002G007900--Sobic001G539940 Sobic002G007900--Sobic002G224000 Sobic002G007900--Sobic002G121800 Sobic002G007900--Sobic010G151575 Sobic002G007900--Sobic004G359900 Sobic002G007900--Sobic006G105500 Sobic002G007900--Sobic010G089900 Sobic002G007900--Sobic002G273200
Octagon: transcription factors


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