Gene annotation
Transcriptome id Sobic.004G359900.1
Synonym
Functional annotation expressed protein
UniProt A0A194YT74
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g01134.1 : expressed protein
MaizeGDB (Corn) Zm00025a022719
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G151575 - -
2 Sobic.006G105500 pectinesterase, putative, expressed -
3 Sobic.002G224000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
4 Sobic.004G197200 fimbrin-like protein 2, putative, expressed -
5 Sobic.006G193700 DUF581 domain containing protein, expressed -
6 Sobic.002G007900 - -
7 Sobic.002G121800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
8 Sobic.001G539940 - -
9 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
11 Sobic.005G212900 IWS1 homolog A, putative, expressed -
12 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
13 Sobic.001G539600 expansin precursor, putative, expressed -
14 Sobic.005G213000 - -
15 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.003G255400 glyoxal oxidase-related, putative, expressed -
17 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
18 Sobic.002G210700 pectinesterase, putative, expressed -
19 Sobic.010G246132 - -
20 Sobic.010G257700 peptidyl-prolyl cis-trans isomerase, putative, expressed -


Gene co-expression network
sample Sobic004G359900 Sobic004G359900 Sobic010G151575 Sobic010G151575 Sobic004G359900--Sobic010G151575 Sobic006G105500 Sobic006G105500 Sobic004G359900--Sobic006G105500 Sobic002G224000 Sobic002G224000 Sobic004G359900--Sobic002G224000 Sobic004G197200 Sobic004G197200 Sobic004G359900--Sobic004G197200 Sobic006G193700 Sobic006G193700 Sobic004G359900--Sobic006G193700 Sobic002G007900 Sobic002G007900 Sobic004G359900--Sobic002G007900 Sobic002G121800 Sobic002G121800 Sobic004G359900--Sobic002G121800 Sobic001G539940 Sobic001G539940 Sobic004G359900--Sobic001G539940 Sobic010G089900 Sobic010G089900 Sobic004G359900--Sobic010G089900 Sobic010G151575--Sobic004G359900 Sobic010G151575--Sobic006G105500 Sobic010G151575--Sobic002G224000 Sobic010G151575--Sobic004G197200 Sobic010G151575--Sobic001G539940 Sobic010G151575--Sobic010G089900 Sobic010G151575--Sobic002G007900 Sobic010G151575--Sobic006G193700 Sobic010G151575--Sobic002G121800 Sobic006G105500--Sobic010G151575 Sobic006G105500--Sobic004G359900 Sobic006G105500--Sobic002G224000 Sobic006G105500--Sobic010G089900 Sobic006G105500--Sobic006G193700 Sobic006G105500--Sobic004G197200 Sobic006G105500--Sobic001G539940 Sobic006G105500--Sobic002G007900 Sobic005G023600 Sobic005G023600 Sobic006G105500--Sobic005G023600 Sobic002G224000--Sobic004G197200 Sobic002G224000--Sobic001G539940 Sobic002G224000--Sobic002G007900 Sobic002G224000--Sobic010G151575 Sobic002G224000--Sobic004G359900 Sobic002G224000--Sobic006G105500 Sobic002G224000--Sobic010G089900 Sobic002G224000--Sobic002G121800 Sobic002G273200 Sobic002G273200 Sobic002G224000--Sobic002G273200 Sobic004G197200--Sobic002G007900 Sobic004G197200--Sobic002G224000 Sobic004G197200--Sobic001G539940 Sobic004G197200--Sobic010G151575 Sobic004G197200--Sobic002G121800 Sobic004G197200--Sobic004G359900 Sobic004G197200--Sobic006G105500 Sobic004G197200--Sobic010G089900 Sobic004G197200--Sobic002G273200 Sobic006G193700--Sobic004G359900 Sobic006G193700--Sobic006G105500 Sobic006G193700--Sobic010G151575 Sobic006G193700--Sobic005G023600 Sobic006G193700--Sobic002G224000 Sobic005G212900 Sobic005G212900 Sobic006G193700--Sobic005G212900 Sobic006G193700--Sobic004G197200 Sobic006G193700--Sobic002G121800 Sobic006G193700--Sobic002G007900 Sobic002G007900--Sobic004G197200 Sobic002G007900--Sobic001G539940 Sobic002G007900--Sobic002G224000 Sobic002G007900--Sobic002G121800 Sobic002G007900--Sobic010G151575 Sobic002G007900--Sobic004G359900 Sobic002G007900--Sobic006G105500 Sobic002G007900--Sobic010G089900 Sobic002G007900--Sobic002G273200 Sobic005G213000 Sobic005G213000 Sobic002G121800--Sobic005G213000 Sobic002G121800--Sobic004G197200 Sobic002G121800--Sobic002G007900 Sobic002G121800--Sobic002G224000 Sobic002G121800--Sobic004G359900 Sobic002G210700 Sobic002G210700 Sobic002G121800--Sobic002G210700 Sobic004G011800 Sobic004G011800 Sobic002G121800--Sobic004G011800 Sobic002G121800--Sobic010G151575 Sobic002G121800--Sobic001G539940 Sobic001G539940--Sobic002G007900 Sobic001G539940--Sobic002G224000 Sobic001G539940--Sobic004G197200 Sobic001G539940--Sobic010G151575 Sobic001G539940--Sobic010G089900 Sobic001G539600 Sobic001G539600 Sobic001G539940--Sobic001G539600 Sobic001G539940--Sobic002G273200 Sobic003G255400 Sobic003G255400 Sobic001G539940--Sobic003G255400 Sobic001G539940--Sobic006G105500 Sobic003G329600 Sobic003G329600 Sobic010G089900--Sobic003G329600 Sobic010G089900--Sobic001G539600 Sobic010G176400 Sobic010G176400 Sobic010G089900--Sobic010G176400 Sobic010G089900--Sobic003G255400 Sobic010G089900--Sobic001G539940 Sobic010G089900--Sobic002G224000 Sobic010G089900--Sobic010G151575 Sobic010G089900--Sobic006G105500 Sobic010G089900--Sobic002G273200
Octagon: transcription factors


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