Gene annotation
Transcriptome id Sobic.002G029000.1
Synonym PERK4, Sb02g002590
Functional annotation protein kinase, putative, expressed
UniProt C5X9E7
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF138
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G18470 : roline-rich extensin-like receptor kinase 4
RAP-DB (Rice) LOC_Os07g04520.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a008389 , Zm00025a003642 , Zm00025a039466 , Zm00025a029688 , Zm00025a044231 , Zm00025a046575 , Zm00025a001449 , Zm00025a016188 , Zm00025a042394
Brachypodium KQK20993 , PNT72865 , KQK18402 , KQK09745
Barley HORVU3Hr1G071830.20 , HORVU2Hr1G061030.8 , HORVU2Hr1G061030.9 , HORVU2Hr1G061030.1 , HORVU2Hr1G061030.2 , HORVU2Hr1G061030.3 , HORVU2Hr1G061030.4 , HORVU2Hr1G061030.5 , HORVU2Hr1G061030.6 , HORVU2Hr1G061030.7 , HORVU4Hr1G065270.14 , HORVU4Hr1G065270.15 , HORVU4Hr1G065270.12 , HORVU4Hr1G065270.13 , HORVU4Hr1G065270.10 , HORVU4Hr1G065270.11 , HORVU7Hr1G047750.8 , HORVU7Hr1G047750.1 , HORVU7Hr1G047750.2 , HORVU7Hr1G047750.3 , HORVU7Hr1G047750.4 , HORVU7Hr1G047750.6 , HORVU7Hr1G047750.7 , HORVU4Hr1G065270.4 , HORVU4Hr1G065270.5 , HORVU4Hr1G065270.6 , HORVU4Hr1G065270.7 , HORVU4Hr1G065270.1 , HORVU4Hr1G065270.2 , HORVU4Hr1G065270.3 , HORVU2Hr1G061030.16 , HORVU2Hr1G061030.14 , HORVU3Hr1G071830.18 , HORVU3Hr1G071830.16 , HORVU3Hr1G071830.14 , HORVU3Hr1G071830.15 , HORVU3Hr1G071830.12 , HORVU3Hr1G071830.13 , HORVU3Hr1G071830.10 , HORVU2Hr1G061030.17 , HORVU2Hr1G061030.12 , HORVU2Hr1G061030.13 , HORVU2Hr1G061030.10 , HORVU2Hr1G061030.11 , HORVU2Hr1G061030.15 , HORVU4Hr1G065270.8 , HORVU4Hr1G065270.9 , HORVU3Hr1G071830.8 , HORVU3Hr1G071830.9 , HORVU3Hr1G071830.4 , HORVU3Hr1G071830.5 , HORVU3Hr1G071830.6 , HORVU3Hr1G071830.7 , HORVU3Hr1G071830.1 , HORVU7Hr1G047570.1 , HORVU7Hr1G047570.2 , HORVU7Hr1G047570.3 , HORVU7Hr1G047570.4 , HORVU7Hr1G047570.5 , HORVU3Hr1G071830.19 , HORVU3Hr1G071830.17 , HORVU4Hr1G016080.1
Wheat TraesCS1D02G091600 , TraesCS4B02G233600 , TraesCS4A02G224700 , TraesCS7A02G231900 , TraesCS3A02G290300 , TraesCS3A02G290300 , TraesCS3A02G290300 , TraesCS4A02G077500 , TraesCS4A02G077500 , TraesCS7A02G231900 , TraesCS1A02G110000 , TraesCS3B02G325100 , TraesCS3B02G325100 , TraesCS7D02G232700 , TraesCS5D02G007100 , TraesCS5D02G007100 , TraesCS1B02G001500 , TraesCS7B02G131000 , TraesCS3D02G290100 , TraesCS3D02G290100 , TraesCS1B02G109400 , TraesCS5B02G415000 , TraesCS5B02G415000
Populus -


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cDNA sequences
Sobic.002G029000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G166500 expansin precursor, putative, expressed -
2 Sobic.003G434100 - -
3 Sobic.002G323200 COBRA-like protein precursor, putative, expressed -
4 Sobic.007G146300 pectinesterase, putative, expressed -
5 Sobic.001G024250 - -
6 Sobic.005G209300 GRAS family transcription factor domain containing protein, expressed -
7 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
8 Sobic.004G041800 expressed protein -
9 Sobic.009G072600 expressed protein -
10 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
11 Sobic.001G445400 expressed protein -
12 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
13 Sobic.001G152800 pollen preferential protein, putative, expressed -
14 Sobic.004G123100 ATROPGEF7/ROPGEF7, putative, expressed -
15 Sobic.006G044800 drought-induced protein 1, putative, expressed -
16 Sobic.010G063700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
17 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
18 Sobic.005G192000 receptor kinase, putative, expressed -
19 Sobic.001G121800 - -
20 Sobic.009G145750 - -


Gene co-expression network
sample Sobic002G029000 Sobic002G029000 Sobic007G166500 Sobic007G166500 Sobic002G029000--Sobic007G166500 Sobic003G434100 Sobic003G434100 Sobic002G029000--Sobic003G434100 Sobic002G323200 Sobic002G323200 Sobic002G029000--Sobic002G323200 Sobic007G146300 Sobic007G146300 Sobic002G029000--Sobic007G146300 Sobic001G024250 Sobic001G024250 Sobic002G029000--Sobic001G024250 Sobic005G209300 Sobic005G209300 Sobic002G029000--Sobic005G209300 Sobic004G080000 Sobic004G080000 Sobic002G029000--Sobic004G080000 Sobic004G041800 Sobic004G041800 Sobic002G029000--Sobic004G041800 Sobic009G072600 Sobic009G072600 Sobic002G029000--Sobic009G072600 Sobic007G166500--Sobic002G029000 Sobic007G166500--Sobic003G434100 Sobic001G445400 Sobic001G445400 Sobic007G166500--Sobic001G445400 Sobic001G152800 Sobic001G152800 Sobic007G166500--Sobic001G152800 Sobic007G166500--Sobic007G146300 Sobic007G166500--Sobic002G323200 Sobic007G166500--Sobic001G024250 Sobic007G166500--Sobic004G080000 Sobic007G166500--Sobic005G209300 Sobic003G434100--Sobic007G166500 Sobic003G434100--Sobic002G029000 Sobic003G434100--Sobic002G323200 Sobic003G434100--Sobic009G072600 Sobic003G434100--Sobic007G146300 Sobic003G434100--Sobic001G024250 Sobic003G434100--Sobic001G445400 Sobic003G434100--Sobic005G209300 Sobic003G434100--Sobic001G152800 Sobic002G323200--Sobic009G072600 Sobic005G192000 Sobic005G192000 Sobic002G323200--Sobic005G192000 Sobic002G323200--Sobic002G029000 Sobic002G323200--Sobic005G209300 Sobic002G323200--Sobic003G434100 Sobic002G210150 Sobic002G210150 Sobic002G323200--Sobic002G210150 Sobic002G061732 Sobic002G061732 Sobic002G323200--Sobic002G061732 Sobic002G323200--Sobic007G166500 Sobic005G181500 Sobic005G181500 Sobic002G323200--Sobic005G181500 Sobic007G146300--Sobic004G080000 Sobic007G146300--Sobic004G041800 Sobic010G276200 Sobic010G276200 Sobic007G146300--Sobic010G276200 Sobic005G023600 Sobic005G023600 Sobic007G146300--Sobic005G023600 Sobic007G146300--Sobic005G209300 Sobic001G466100 Sobic001G466100 Sobic007G146300--Sobic001G466100 Sobic007G146300--Sobic001G024250 Sobic010G176400 Sobic010G176400 Sobic007G146300--Sobic010G176400 Sobic006G105500 Sobic006G105500 Sobic007G146300--Sobic006G105500 Sobic001G024250--Sobic007G146300 Sobic001G024250--Sobic004G080000 Sobic001G024250--Sobic010G276200 Sobic001G024250--Sobic004G041800 Sobic001G024250--Sobic005G209300 Sobic001G024250--Sobic005G023600 Sobic001G024250--Sobic002G029000 Sobic001G024250--Sobic001G466100 Sobic006G096700 Sobic006G096700 Sobic001G024250--Sobic006G096700 Sobic005G209300--Sobic004G041800 Sobic005G209300--Sobic004G080000 Sobic004G331500 Sobic004G331500 Sobic005G209300--Sobic004G331500 Sobic005G209300--Sobic001G466100 Sobic005G209300--Sobic007G146300 Sobic010G034300 Sobic010G034300 Sobic005G209300--Sobic010G034300 Sobic009G165900 Sobic009G165900 Sobic005G209300--Sobic009G165900 Sobic009G166000 Sobic009G166000 Sobic005G209300--Sobic009G166000 Sobic010G254100 Sobic010G254100 Sobic005G209300--Sobic010G254100 Sobic004G080000--Sobic004G041800 Sobic004G080000--Sobic007G146300 Sobic004G080000--Sobic001G466100 Sobic004G080000--Sobic010G276200 Sobic004G080000--Sobic005G023600 Sobic004G080000--Sobic005G209300 Sobic004G080000--Sobic010G176400 Sobic004G123100 Sobic004G123100 Sobic004G080000--Sobic004G123100 Sobic003G329600 Sobic003G329600 Sobic004G080000--Sobic003G329600 Sobic004G041800--Sobic004G080000 Sobic004G041800--Sobic001G466100 Sobic004G041800--Sobic007G146300 Sobic004G041800--Sobic010G276200 Sobic004G041800--Sobic005G209300 Sobic004G041800--Sobic010G034300 Sobic004G041800--Sobic010G176400 Sobic009G252000 Sobic009G252000 Sobic004G041800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic004G041800--Sobic009G091000 Sobic009G072600--Sobic002G323200 Sobic009G072600--Sobic002G061732 Sobic009G072600--Sobic005G192000 Sobic009G072600--Sobic003G434100 Sobic009G072600--Sobic002G029000 Sobic005G199800 Sobic005G199800 Sobic009G072600--Sobic005G199800 Sobic009G072600--Sobic007G166500 Sobic009G072600--Sobic002G210150 Sobic009G072600--Sobic005G209300
Octagon: transcription factors


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