Gene annotation
Transcriptome id Sobic.002G197900.1
Synonym
Functional annotation -
UniProt A0A1B6QCG0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G164700 C2 domain containing protein, putative, expressed -
2 Sobic.001G228000 universal stress protein domain containing protein, putative, expressed -
3 Sobic.004G294200 ZOS2-13 - C2H2 zinc finger protein, expressed -
4 Sobic.007G057600 - -
5 Sobic.007G175800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
6 Sobic.001G002200 myosin, putative, expressed K10357: myosin V
7 Sobic.006G237700 expressed protein -
8 Sobic.003G178000 pectinesterase, putative, expressed -
9 Sobic.004G024000 OsCML11 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
10 Sobic.003G317600 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
11 Sobic.003G127200 phosphatidylinositol kinase, putative, expressed -
12 Sobic.001G240900 DUF623 domain containing protein, expressed -
13 Sobic.001G348600 patatin, putative, expressed -
14 Sobic.004G166100 pollen allergen Cyn d 23, putative, expressed -
15 Sobic.007G222500 - -
16 Sobic.002G351500 pollen allergen Cyn d 23, putative, expressed -
17 Sobic.004G070600 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
18 Sobic.008G119501 - -
19 Sobic.002G140500 POEI23 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
20 Sobic.008G028300 pollen allergen, putative, expressed -


Gene co-expression network
sample Sobic002G197900 Sobic002G197900 Sobic003G164700 Sobic003G164700 Sobic002G197900--Sobic003G164700 Sobic001G228000 Sobic001G228000 Sobic002G197900--Sobic001G228000 Sobic004G294200 Sobic004G294200 Sobic002G197900--Sobic004G294200 Sobic007G057600 Sobic007G057600 Sobic002G197900--Sobic007G057600 Sobic007G175800 Sobic007G175800 Sobic002G197900--Sobic007G175800 Sobic001G002200 Sobic001G002200 Sobic002G197900--Sobic001G002200 Sobic006G237700 Sobic006G237700 Sobic002G197900--Sobic006G237700 Sobic003G178000 Sobic003G178000 Sobic002G197900--Sobic003G178000 Sobic004G024000 Sobic004G024000 Sobic002G197900--Sobic004G024000 Sobic003G164700--Sobic001G228000 Sobic003G164700--Sobic002G197900 Sobic003G164700--Sobic004G294200 Sobic001G240900 Sobic001G240900 Sobic003G164700--Sobic001G240900 Sobic003G164700--Sobic006G237700 Sobic008G119501 Sobic008G119501 Sobic003G164700--Sobic008G119501 Sobic003G164700--Sobic001G002200 Sobic003G317600 Sobic003G317600 Sobic003G164700--Sobic003G317600 Sobic010G229801 Sobic010G229801 Sobic003G164700--Sobic010G229801 Sobic001G228000--Sobic001G002200 Sobic001G348600 Sobic001G348600 Sobic001G228000--Sobic001G348600 Sobic001G228000--Sobic003G164700 Sobic001G228000--Sobic002G197900 Sobic002G140500 Sobic002G140500 Sobic001G228000--Sobic002G140500 Sobic008G027800 Sobic008G027800 Sobic001G228000--Sobic008G027800 Sobic001G228000--Sobic007G057600 Sobic008G028300 Sobic008G028300 Sobic001G228000--Sobic008G028300 Sobic001G228000--Sobic004G024000 Sobic004G294200--Sobic003G164700 Sobic004G294200--Sobic002G197900 Sobic002G066100 Sobic002G066100 Sobic004G294200--Sobic002G066100 Sobic002G351500 Sobic002G351500 Sobic004G294200--Sobic002G351500 Sobic004G294200--Sobic003G178000 Sobic009G177300 Sobic009G177300 Sobic004G294200--Sobic009G177300 Sobic004G294200--Sobic001G228000 Sobic008G124301 Sobic008G124301 Sobic004G294200--Sobic008G124301 Sobic004G294200--Sobic006G237700 Sobic001G528700 Sobic001G528700 Sobic007G057600--Sobic001G528700 Sobic007G057600--Sobic001G228000 Sobic007G222500 Sobic007G222500 Sobic007G057600--Sobic007G222500 Sobic007G057600--Sobic004G024000 Sobic007G057600--Sobic002G197900 Sobic007G057600--Sobic007G175800 Sobic004G166100 Sobic004G166100 Sobic007G057600--Sobic004G166100 Sobic001G252900 Sobic001G252900 Sobic007G057600--Sobic001G252900 Sobic007G057600--Sobic001G002200 Sobic003G335200 Sobic003G335200 Sobic007G175800--Sobic003G335200 Sobic007G175800--Sobic001G348600 Sobic007G175800--Sobic007G222500 Sobic007G175800--Sobic007G057600 Sobic007G175800--Sobic001G228000 Sobic007G175800--Sobic003G317600 Sobic004G002800 Sobic004G002800 Sobic007G175800--Sobic004G002800 Sobic007G175800--Sobic001G252900 Sobic007G175800--Sobic002G197900 Sobic001G002200--Sobic008G027800 Sobic010G093600 Sobic010G093600 Sobic001G002200--Sobic010G093600 Sobic001G002200--Sobic008G028300 Sobic001G002200--Sobic002G140500 Sobic001G002200--Sobic001G228000 Sobic002G002600 Sobic002G002600 Sobic001G002200--Sobic002G002600 Sobic009G096700 Sobic009G096700 Sobic001G002200--Sobic009G096700 Sobic009G016700 Sobic009G016700 Sobic001G002200--Sobic009G016700 Sobic008G028200 Sobic008G028200 Sobic001G002200--Sobic008G028200 Sobic006G237700--Sobic003G164700 Sobic006G237700--Sobic001G228000 Sobic006G237700--Sobic002G197900 Sobic006G237700--Sobic001G240900 Sobic006G237700--Sobic008G119501 Sobic006G237700--Sobic001G002200 Sobic002G150400 Sobic002G150400 Sobic006G237700--Sobic002G150400 Sobic006G237700--Sobic001G348600 Sobic006G237700--Sobic010G229801 Sobic003G178000--Sobic002G351500 Sobic003G061700 Sobic003G061700 Sobic003G178000--Sobic003G061700 Sobic008G186900 Sobic008G186900 Sobic003G178000--Sobic008G186900 Sobic007G100800 Sobic007G100800 Sobic003G178000--Sobic007G100800 Sobic003G127200 Sobic003G127200 Sobic003G178000--Sobic003G127200 Sobic003G178000--Sobic004G294200 Sobic003G178000--Sobic003G164700 Sobic009G216400 Sobic009G216400 Sobic003G178000--Sobic009G216400 Sobic003G178000--Sobic009G177300 Sobic004G024000--Sobic004G166100 Sobic004G024000--Sobic001G002200 Sobic004G024000--Sobic008G028300 Sobic007G222400 Sobic007G222400 Sobic004G024000--Sobic007G222400 Sobic004G024000--Sobic010G093600 Sobic001G539700 Sobic001G539700 Sobic004G024000--Sobic001G539700 Sobic004G024000--Sobic002G002600 Sobic004G024000--Sobic009G016700 Sobic008G028100 Sobic008G028100 Sobic004G024000--Sobic008G028100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.