Gene annotation
Transcriptome id Sobic.003G317600.1
Synonym Sb03g036480, NDB3
Functional annotation NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed
UniProt C5XLQ3
Pfam PF00070
Panther DB PTHR22912
NCBI CDD -
KEGG Orthology K17871; NADH:ubiquinone reductase (non-electrogenic)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G21490 : NAD(P)H dehydrogenase B3
RAP-DB (Rice) LOC_Os05g26660.1 : NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039885 , Zm00025a027277
Brachypodium PNT72988 , KQK10080 , KQK10081 , KQJ95034
Barley HORVU3Hr1G076920.6 , HORVU7Hr1G073050.8 , HORVU7Hr1G073050.9 , HORVU7Hr1G073050.4 , HORVU7Hr1G073050.5 , HORVU7Hr1G073050.6 , HORVU7Hr1G073050.7 , HORVU7Hr1G073050.1 , HORVU7Hr1G073050.2 , HORVU7Hr1G073050.3 , HORVU3Hr1G076920.8 , HORVU3Hr1G076920.7 , HORVU3Hr1G076920.5 , HORVU3Hr1G076920.4 , HORVU3Hr1G076920.3 , HORVU3Hr1G076920.2 , HORVU3Hr1G076920.1
Wheat TraesCS3B02G350200 , TraesCS7D02G303500 , TraesCS7B02G206900 , TraesCS7A02G306600 , TraesCS3A02G316500 , TraesCS3D02G314700
Populus PNT39367 , PNT39369 , PNT39368


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G175800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
2 Sobic.006G282000 cytochrome c, putative, expressed K08738: cytochrome c
3 Sobic.008G119501 - -
4 Sobic.003G164700 C2 domain containing protein, putative, expressed -
5 Sobic.010G229801 - -
6 Sobic.003G335200 monocopper oxidase, putative, expressed -
7 Sobic.001G228000 universal stress protein domain containing protein, putative, expressed -
8 Sobic.001G348600 patatin, putative, expressed -
9 Sobic.001G024800 uncharacterized Cys-rich domain containing protein, putative, expressed -
10 Sobic.001G097000 WD-40 repeat family protein, putative, expressed -
11 Sobic.002G303500 actin-depolymerizing factor, putative, expressed K05765: cofilin
12 Sobic.002G197900 - -
13 Sobic.002G066300 expressed protein -
14 Sobic.002G150400 harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.006G171500 ZOS4-09 - C2H2 zinc finger protein, expressed -
16 Sobic.005G023700 pollen allergen Cyn d 23, putative, expressed -
17 Sobic.004G029032 - -
18 Sobic.007G057600 - -
19 Sobic.003G400000 signal peptide peptidase-like 2B, putative, expressed -
20 Sobic.006G237700 expressed protein -


Gene co-expression network
sample Sobic003G317600 Sobic003G317600 Sobic007G175800 Sobic007G175800 Sobic003G317600--Sobic007G175800 Sobic006G282000 Sobic006G282000 Sobic003G317600--Sobic006G282000 Sobic008G119501 Sobic008G119501 Sobic003G317600--Sobic008G119501 Sobic003G164700 Sobic003G164700 Sobic003G317600--Sobic003G164700 Sobic010G229801 Sobic010G229801 Sobic003G317600--Sobic010G229801 Sobic003G335200 Sobic003G335200 Sobic003G317600--Sobic003G335200 Sobic001G228000 Sobic001G228000 Sobic003G317600--Sobic001G228000 Sobic001G348600 Sobic001G348600 Sobic003G317600--Sobic001G348600 Sobic001G024800 Sobic001G024800 Sobic003G317600--Sobic001G024800 Sobic007G175800--Sobic003G335200 Sobic007G175800--Sobic001G348600 Sobic007G222500 Sobic007G222500 Sobic007G175800--Sobic007G222500 Sobic007G057600 Sobic007G057600 Sobic007G175800--Sobic007G057600 Sobic007G175800--Sobic001G228000 Sobic007G175800--Sobic003G317600 Sobic004G002800 Sobic004G002800 Sobic007G175800--Sobic004G002800 Sobic001G252900 Sobic001G252900 Sobic007G175800--Sobic001G252900 Sobic002G197900 Sobic002G197900 Sobic007G175800--Sobic002G197900 Sobic006G282000--Sobic008G119501 Sobic001G097000 Sobic001G097000 Sobic006G282000--Sobic001G097000 Sobic002G066300 Sobic002G066300 Sobic006G282000--Sobic002G066300 Sobic002G303500 Sobic002G303500 Sobic006G282000--Sobic002G303500 Sobic004G242600 Sobic004G242600 Sobic006G282000--Sobic004G242600 Sobic005G023700 Sobic005G023700 Sobic006G282000--Sobic005G023700 Sobic009G091600 Sobic009G091600 Sobic006G282000--Sobic009G091600 Sobic006G282000--Sobic001G024800 Sobic003G400000 Sobic003G400000 Sobic006G282000--Sobic003G400000 Sobic008G119501--Sobic006G282000 Sobic008G119501--Sobic002G066300 Sobic008G119501--Sobic001G097000 Sobic008G119501--Sobic001G024800 Sobic008G119501--Sobic004G242600 Sobic008G119501--Sobic002G303500 Sobic008G119501--Sobic003G400000 Sobic008G119501--Sobic005G023700 Sobic004G029032 Sobic004G029032 Sobic008G119501--Sobic004G029032 Sobic003G164700--Sobic001G228000 Sobic003G164700--Sobic002G197900 Sobic004G294200 Sobic004G294200 Sobic003G164700--Sobic004G294200 Sobic001G240900 Sobic001G240900 Sobic003G164700--Sobic001G240900 Sobic006G237700 Sobic006G237700 Sobic003G164700--Sobic006G237700 Sobic003G164700--Sobic008G119501 Sobic001G002200 Sobic001G002200 Sobic003G164700--Sobic001G002200 Sobic003G164700--Sobic003G317600 Sobic003G164700--Sobic010G229801 Sobic006G171500 Sobic006G171500 Sobic010G229801--Sobic006G171500 Sobic010G229801--Sobic008G119501 Sobic002G150400 Sobic002G150400 Sobic010G229801--Sobic002G150400 Sobic010G229801--Sobic001G348600 Sobic010G229801--Sobic001G024800 Sobic010G229801--Sobic006G282000 Sobic010G229801--Sobic004G029032 Sobic010G229801--Sobic001G228000 Sobic008G028200 Sobic008G028200 Sobic010G229801--Sobic008G028200 Sobic009G075400 Sobic009G075400 Sobic003G335200--Sobic009G075400 Sobic003G335200--Sobic004G002800 Sobic003G335200--Sobic005G023700 Sobic005G025600 Sobic005G025600 Sobic003G335200--Sobic005G025600 Sobic006G263500 Sobic006G263500 Sobic003G335200--Sobic006G263500 Sobic006G159000 Sobic006G159000 Sobic003G335200--Sobic006G159000 Sobic003G335200--Sobic002G066300 Sobic010G006900 Sobic010G006900 Sobic003G335200--Sobic010G006900 Sobic003G335200--Sobic001G252900 Sobic001G228000--Sobic001G002200 Sobic001G228000--Sobic001G348600 Sobic001G228000--Sobic003G164700 Sobic001G228000--Sobic002G197900 Sobic002G140500 Sobic002G140500 Sobic001G228000--Sobic002G140500 Sobic008G027800 Sobic008G027800 Sobic001G228000--Sobic008G027800 Sobic001G228000--Sobic007G057600 Sobic008G028300 Sobic008G028300 Sobic001G228000--Sobic008G028300 Sobic004G024000 Sobic004G024000 Sobic001G228000--Sobic004G024000 Sobic001G348600--Sobic006G171500 Sobic001G348600--Sobic008G028200 Sobic001G348600--Sobic004G029032 Sobic001G348600--Sobic007G222500 Sobic001G348600--Sobic001G228000 Sobic001G348600--Sobic002G150400 Sobic001G348600--Sobic002G140500 Sobic001G348600--Sobic001G002200 Sobic001G348600--Sobic008G027800 Sobic001G024800--Sobic002G150400 Sobic001G024800--Sobic008G119501 Sobic001G024800--Sobic004G029032 Sobic001G024800--Sobic003G400000 Sobic001G024800--Sobic006G171500 Sobic001G024800--Sobic006G282000 Sobic001G024800--Sobic002G066300 Sobic001G024800--Sobic001G348600 Sobic001G024800--Sobic009G091600
Octagon: transcription factors


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