Gene annotation
Transcriptome id Sobic.001G228000.1
Synonym Sb01g019990
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt C5WZF0
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT4G13450 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os10g32590.1 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017687
Brachypodium -
Barley HORVU1Hr1G038740.3 , HORVU1Hr1G038740.2 , HORVU1Hr1G038740.1
Wheat TraesCS1D02G144300 , TraesCS1B02G162600
Populus PNT15074


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G002200 myosin, putative, expressed K10357: myosin V
2 Sobic.001G348600 patatin, putative, expressed -
3 Sobic.003G164700 C2 domain containing protein, putative, expressed -
4 Sobic.002G197900 - -
5 Sobic.002G140500 POEI23 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.008G027800 pollen allergen, putative, expressed -
7 Sobic.007G057600 - -
8 Sobic.008G028300 pollen allergen, putative, expressed -
9 Sobic.004G024000 OsCML11 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
10 Sobic.008G028200 pollen allergen, putative, expressed -
11 Sobic.002G150400 harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.004G166100 pollen allergen Cyn d 23, putative, expressed -
13 Sobic.007G222500 - -
14 Sobic.006G171500 ZOS4-09 - C2H2 zinc finger protein, expressed -
15 Sobic.007G175800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
16 Sobic.010G093600 myosin, putative, expressed K10357: myosin V
17 Sobic.003G127200 phosphatidylinositol kinase, putative, expressed -
18 Sobic.004G070600 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
19 Sobic.001G240900 DUF623 domain containing protein, expressed -
20 Sobic.001G528700 - -


Gene co-expression network
sample Sobic001G228000 Sobic001G228000 Sobic001G002200 Sobic001G002200 Sobic001G228000--Sobic001G002200 Sobic001G348600 Sobic001G348600 Sobic001G228000--Sobic001G348600 Sobic003G164700 Sobic003G164700 Sobic001G228000--Sobic003G164700 Sobic002G197900 Sobic002G197900 Sobic001G228000--Sobic002G197900 Sobic002G140500 Sobic002G140500 Sobic001G228000--Sobic002G140500 Sobic008G027800 Sobic008G027800 Sobic001G228000--Sobic008G027800 Sobic007G057600 Sobic007G057600 Sobic001G228000--Sobic007G057600 Sobic008G028300 Sobic008G028300 Sobic001G228000--Sobic008G028300 Sobic004G024000 Sobic004G024000 Sobic001G228000--Sobic004G024000 Sobic001G002200--Sobic008G027800 Sobic010G093600 Sobic010G093600 Sobic001G002200--Sobic010G093600 Sobic001G002200--Sobic008G028300 Sobic001G002200--Sobic002G140500 Sobic001G002200--Sobic001G228000 Sobic002G002600 Sobic002G002600 Sobic001G002200--Sobic002G002600 Sobic009G096700 Sobic009G096700 Sobic001G002200--Sobic009G096700 Sobic009G016700 Sobic009G016700 Sobic001G002200--Sobic009G016700 Sobic008G028200 Sobic008G028200 Sobic001G002200--Sobic008G028200 Sobic006G171500 Sobic006G171500 Sobic001G348600--Sobic006G171500 Sobic001G348600--Sobic008G028200 Sobic004G029032 Sobic004G029032 Sobic001G348600--Sobic004G029032 Sobic007G222500 Sobic007G222500 Sobic001G348600--Sobic007G222500 Sobic001G348600--Sobic001G228000 Sobic002G150400 Sobic002G150400 Sobic001G348600--Sobic002G150400 Sobic001G348600--Sobic002G140500 Sobic001G348600--Sobic001G002200 Sobic001G348600--Sobic008G027800 Sobic003G164700--Sobic001G228000 Sobic003G164700--Sobic002G197900 Sobic004G294200 Sobic004G294200 Sobic003G164700--Sobic004G294200 Sobic001G240900 Sobic001G240900 Sobic003G164700--Sobic001G240900 Sobic006G237700 Sobic006G237700 Sobic003G164700--Sobic006G237700 Sobic008G119501 Sobic008G119501 Sobic003G164700--Sobic008G119501 Sobic003G164700--Sobic001G002200 Sobic003G317600 Sobic003G317600 Sobic003G164700--Sobic003G317600 Sobic010G229801 Sobic010G229801 Sobic003G164700--Sobic010G229801 Sobic002G197900--Sobic003G164700 Sobic002G197900--Sobic001G228000 Sobic002G197900--Sobic004G294200 Sobic002G197900--Sobic007G057600 Sobic007G175800 Sobic007G175800 Sobic002G197900--Sobic007G175800 Sobic002G197900--Sobic001G002200 Sobic002G197900--Sobic006G237700 Sobic003G178000 Sobic003G178000 Sobic002G197900--Sobic003G178000 Sobic002G197900--Sobic004G024000 Sobic002G140500--Sobic001G002200 Sobic002G140500--Sobic008G027800 Sobic002G140500--Sobic008G028200 Sobic002G140500--Sobic010G093600 Sobic002G140500--Sobic001G348600 Sobic002G140500--Sobic008G028300 Sobic002G140500--Sobic009G016700 Sobic002G140500--Sobic006G171500 Sobic002G140500--Sobic001G228000 Sobic008G027800--Sobic010G093600 Sobic008G027800--Sobic001G002200 Sobic008G027800--Sobic009G096700 Sobic008G027800--Sobic008G028200 Sobic008G027800--Sobic009G016700 Sobic008G028100 Sobic008G028100 Sobic008G027800--Sobic008G028100 Sobic008G027800--Sobic008G028300 Sobic008G027800--Sobic002G140500 Sobic008G027800--Sobic002G002600 Sobic001G528700 Sobic001G528700 Sobic007G057600--Sobic001G528700 Sobic007G057600--Sobic001G228000 Sobic007G057600--Sobic007G222500 Sobic007G057600--Sobic004G024000 Sobic007G057600--Sobic002G197900 Sobic007G057600--Sobic007G175800 Sobic004G166100 Sobic004G166100 Sobic007G057600--Sobic004G166100 Sobic001G252900 Sobic001G252900 Sobic007G057600--Sobic001G252900 Sobic007G057600--Sobic001G002200 Sobic008G028300--Sobic002G002600 Sobic008G028300--Sobic008G028100 Sobic001G539700 Sobic001G539700 Sobic008G028300--Sobic001G539700 Sobic008G028300--Sobic001G002200 Sobic010G161400 Sobic010G161400 Sobic008G028300--Sobic010G161400 Sobic008G028300--Sobic009G016700 Sobic008G028300--Sobic010G093600 Sobic003G127200 Sobic003G127200 Sobic008G028300--Sobic003G127200 Sobic008G028300--Sobic004G166100 Sobic004G024000--Sobic004G166100 Sobic004G024000--Sobic001G002200 Sobic004G024000--Sobic008G028300 Sobic007G222400 Sobic007G222400 Sobic004G024000--Sobic007G222400 Sobic004G024000--Sobic010G093600 Sobic004G024000--Sobic001G539700 Sobic004G024000--Sobic002G002600 Sobic004G024000--Sobic009G016700 Sobic004G024000--Sobic008G028100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.