Gene annotation
Transcriptome id Sobic.004G024000.2
Synonym Sb04g002130
Functional annotation OsCML11 - Calmodulin-related calcium sensor protein, expressed
UniProt A0A1Z5RKJ4
Pfam PF13499
Panther DB PTHR10891 PTHR10891:SF290
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32250 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os01g32120.1 : OsCML11 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a018067 , Zm00025a044681
Brachypodium KQJ97968
Barley HORVU1Hr1G080000.3 , HORVU1Hr1G080000.2 , HORVU1Hr1G080000.1 , HORVU1Hr1G050720.2 , HORVU1Hr1G050720.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G166100 pollen allergen Cyn d 23, putative, expressed -
2 Sobic.001G002200 myosin, putative, expressed K10357: myosin V
3 Sobic.008G028300 pollen allergen, putative, expressed -
4 Sobic.007G222400 - -
5 Sobic.010G093600 myosin, putative, expressed K10357: myosin V
6 Sobic.001G539700 expansin precursor, putative, expressed -
7 Sobic.002G002600 la domain containing protein, expressed -
8 Sobic.009G016700 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
9 Sobic.008G028100 pollen allergen, putative, expressed -
10 Sobic.001G528700 - -
11 Sobic.008G027800 pollen allergen, putative, expressed -
12 Sobic.009G096700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
13 Sobic.007G057600 - -
14 Sobic.001G228000 universal stress protein domain containing protein, putative, expressed -
15 Sobic.009G089532 - -
16 Sobic.003G127200 phosphatidylinositol kinase, putative, expressed -
17 Sobic.002G140500 POEI23 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.008G028200 pollen allergen, putative, expressed -
19 Sobic.007G222500 - -
20 Sobic.009G102700 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1


Gene co-expression network
sample Sobic004G024000 Sobic004G024000 Sobic004G166100 Sobic004G166100 Sobic004G024000--Sobic004G166100 Sobic001G002200 Sobic001G002200 Sobic004G024000--Sobic001G002200 Sobic008G028300 Sobic008G028300 Sobic004G024000--Sobic008G028300 Sobic007G222400 Sobic007G222400 Sobic004G024000--Sobic007G222400 Sobic010G093600 Sobic010G093600 Sobic004G024000--Sobic010G093600 Sobic001G539700 Sobic001G539700 Sobic004G024000--Sobic001G539700 Sobic002G002600 Sobic002G002600 Sobic004G024000--Sobic002G002600 Sobic009G016700 Sobic009G016700 Sobic004G024000--Sobic009G016700 Sobic008G028100 Sobic008G028100 Sobic004G024000--Sobic008G028100 Sobic004G166100--Sobic004G024000 Sobic004G166100--Sobic008G028300 Sobic004G166100--Sobic001G539700 Sobic004G166100--Sobic001G002200 Sobic001G528700 Sobic001G528700 Sobic004G166100--Sobic001G528700 Sobic004G166100--Sobic008G028100 Sobic004G166100--Sobic002G002600 Sobic004G166100--Sobic010G093600 Sobic004G166100--Sobic007G222400 Sobic008G027800 Sobic008G027800 Sobic001G002200--Sobic008G027800 Sobic001G002200--Sobic010G093600 Sobic001G002200--Sobic008G028300 Sobic002G140500 Sobic002G140500 Sobic001G002200--Sobic002G140500 Sobic001G228000 Sobic001G228000 Sobic001G002200--Sobic001G228000 Sobic001G002200--Sobic002G002600 Sobic009G096700 Sobic009G096700 Sobic001G002200--Sobic009G096700 Sobic001G002200--Sobic009G016700 Sobic008G028200 Sobic008G028200 Sobic001G002200--Sobic008G028200 Sobic008G028300--Sobic002G002600 Sobic008G028300--Sobic008G028100 Sobic008G028300--Sobic001G539700 Sobic008G028300--Sobic001G002200 Sobic010G161400 Sobic010G161400 Sobic008G028300--Sobic010G161400 Sobic008G028300--Sobic009G016700 Sobic008G028300--Sobic010G093600 Sobic003G127200 Sobic003G127200 Sobic008G028300--Sobic003G127200 Sobic008G028300--Sobic004G166100 Sobic007G222400--Sobic009G016700 Sobic007G222400--Sobic001G539700 Sobic007G222400--Sobic008G028100 Sobic007G222400--Sobic010G093600 Sobic007G222400--Sobic008G028300 Sobic007G222400--Sobic004G166100 Sobic007G222400--Sobic002G002600 Sobic007G222400--Sobic004G024000 Sobic007G222400--Sobic009G096700 Sobic010G093600--Sobic009G096700 Sobic010G093600--Sobic009G016700 Sobic010G093600--Sobic008G028100 Sobic010G093600--Sobic008G027800 Sobic010G093600--Sobic001G539700 Sobic010G093600--Sobic001G002200 Sobic010G093600--Sobic002G002600 Sobic010G093600--Sobic008G028200 Sobic010G093600--Sobic008G028300 Sobic001G539700--Sobic008G028100 Sobic009G089532 Sobic009G089532 Sobic001G539700--Sobic009G089532 Sobic001G539700--Sobic002G002600 Sobic001G539700--Sobic009G016700 Sobic001G539700--Sobic010G093600 Sobic001G539700--Sobic009G096700 Sobic001G539700--Sobic008G028300 Sobic009G098900 Sobic009G098900 Sobic001G539700--Sobic009G098900 Sobic001G539700--Sobic007G222400 Sobic002G002600--Sobic008G028300 Sobic002G002600--Sobic001G539700 Sobic002G002600--Sobic008G028100 Sobic002G002600--Sobic009G089532 Sobic002G002600--Sobic010G161400 Sobic002G002600--Sobic009G016700 Sobic002G002600--Sobic010G093600 Sobic002G002600--Sobic009G096700 Sobic002G002600--Sobic003G127200 Sobic009G016700--Sobic010G093600 Sobic009G016700--Sobic008G028100 Sobic009G016700--Sobic001G539700 Sobic009G016700--Sobic002G002600 Sobic009G016700--Sobic007G222400 Sobic009G016700--Sobic009G096700 Sobic009G016700--Sobic008G028300 Sobic009G016700--Sobic008G027800 Sobic009G016700--Sobic001G002200 Sobic008G028100--Sobic001G539700 Sobic008G028100--Sobic009G089532 Sobic008G028100--Sobic002G002600 Sobic008G028100--Sobic009G016700 Sobic008G028100--Sobic010G093600 Sobic008G028100--Sobic009G096700 Sobic008G028100--Sobic008G028300 Sobic008G028100--Sobic007G222400 Sobic008G028100--Sobic009G098900
Octagon: transcription factors


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