Gene annotation
Transcriptome id Sobic.001G528700.1
Synonym
Functional annotation -
UniProt C5X0W6
Pfam PF01805
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006396; RNA processing GO:0003723RNA binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium PNT78298
Barley HORVU4Hr1G085130.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G222500 - -
2 Sobic.004G166100 pollen allergen Cyn d 23, putative, expressed -
3 Sobic.009G102700 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
4 Sobic.004G024000 OsCML11 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
5 Sobic.007G057600 - -
6 Sobic.001G252900 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
7 Sobic.008G028200 pollen allergen, putative, expressed -
8 Sobic.010G093600 myosin, putative, expressed K10357: myosin V
9 Sobic.001G002200 myosin, putative, expressed K10357: myosin V
10 Sobic.009G096700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.010G252600 cyclin-related protein, putative, expressed -
12 Sobic.008G027800 pollen allergen, putative, expressed -
13 Sobic.007G222400 - -
14 Sobic.001G348600 patatin, putative, expressed -
15 Sobic.001G228000 universal stress protein domain containing protein, putative, expressed -
16 Sobic.003G073540 - -
17 Sobic.009G016700 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
18 Sobic.001G539700 expansin precursor, putative, expressed -
19 Sobic.004G070600 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
20 Sobic.008G028100 pollen allergen, putative, expressed -


Gene co-expression network
sample Sobic001G528700 Sobic001G528700 Sobic007G222500 Sobic007G222500 Sobic001G528700--Sobic007G222500 Sobic004G166100 Sobic004G166100 Sobic001G528700--Sobic004G166100 Sobic009G102700 Sobic009G102700 Sobic001G528700--Sobic009G102700 Sobic004G024000 Sobic004G024000 Sobic001G528700--Sobic004G024000 Sobic007G057600 Sobic007G057600 Sobic001G528700--Sobic007G057600 Sobic001G252900 Sobic001G252900 Sobic001G528700--Sobic001G252900 Sobic008G028200 Sobic008G028200 Sobic001G528700--Sobic008G028200 Sobic010G093600 Sobic010G093600 Sobic001G528700--Sobic010G093600 Sobic001G002200 Sobic001G002200 Sobic001G528700--Sobic001G002200 Sobic007G222500--Sobic001G528700 Sobic007G222500--Sobic001G252900 Sobic001G348600 Sobic001G348600 Sobic007G222500--Sobic001G348600 Sobic007G222500--Sobic008G028200 Sobic007G222500--Sobic007G057600 Sobic004G002800 Sobic004G002800 Sobic007G222500--Sobic004G002800 Sobic006G171500 Sobic006G171500 Sobic007G222500--Sobic006G171500 Sobic007G222500--Sobic004G166100 Sobic001G228000 Sobic001G228000 Sobic007G222500--Sobic001G228000 Sobic004G166100--Sobic004G024000 Sobic008G028300 Sobic008G028300 Sobic004G166100--Sobic008G028300 Sobic001G539700 Sobic001G539700 Sobic004G166100--Sobic001G539700 Sobic004G166100--Sobic001G002200 Sobic004G166100--Sobic001G528700 Sobic008G028100 Sobic008G028100 Sobic004G166100--Sobic008G028100 Sobic002G002600 Sobic002G002600 Sobic004G166100--Sobic002G002600 Sobic004G166100--Sobic010G093600 Sobic007G222400 Sobic007G222400 Sobic004G166100--Sobic007G222400 Sobic009G102700--Sobic004G166100 Sobic009G102700--Sobic001G528700 Sobic009G102700--Sobic004G024000 Sobic004G025500 Sobic004G025500 Sobic009G102700--Sobic004G025500 Sobic009G102700--Sobic001G539700 Sobic009G102700--Sobic007G057600 Sobic010G252600 Sobic010G252600 Sobic009G102700--Sobic010G252600 Sobic009G102700--Sobic007G222500 Sobic009G102700--Sobic007G222400 Sobic004G024000--Sobic004G166100 Sobic004G024000--Sobic001G002200 Sobic004G024000--Sobic008G028300 Sobic004G024000--Sobic007G222400 Sobic004G024000--Sobic010G093600 Sobic004G024000--Sobic001G539700 Sobic004G024000--Sobic002G002600 Sobic009G016700 Sobic009G016700 Sobic004G024000--Sobic009G016700 Sobic004G024000--Sobic008G028100 Sobic007G057600--Sobic001G528700 Sobic007G057600--Sobic001G228000 Sobic007G057600--Sobic007G222500 Sobic007G057600--Sobic004G024000 Sobic002G197900 Sobic002G197900 Sobic007G057600--Sobic002G197900 Sobic007G175800 Sobic007G175800 Sobic007G057600--Sobic007G175800 Sobic007G057600--Sobic004G166100 Sobic007G057600--Sobic001G252900 Sobic007G057600--Sobic001G002200 Sobic001G252900--Sobic004G002800 Sobic009G082900 Sobic009G082900 Sobic001G252900--Sobic009G082900 Sobic005G025600 Sobic005G025600 Sobic001G252900--Sobic005G025600 Sobic003G073540 Sobic003G073540 Sobic001G252900--Sobic003G073540 Sobic001G252900--Sobic007G222500 Sobic006G263500 Sobic006G263500 Sobic001G252900--Sobic006G263500 Sobic003G335200 Sobic003G335200 Sobic001G252900--Sobic003G335200 Sobic010G006900 Sobic010G006900 Sobic001G252900--Sobic010G006900 Sobic001G252900--Sobic001G528700 Sobic008G028200--Sobic006G171500 Sobic008G028200--Sobic010G093600 Sobic008G027800 Sobic008G027800 Sobic008G028200--Sobic008G027800 Sobic008G028200--Sobic001G348600 Sobic002G150400 Sobic002G150400 Sobic008G028200--Sobic002G150400 Sobic008G028200--Sobic001G002200 Sobic004G029032 Sobic004G029032 Sobic008G028200--Sobic004G029032 Sobic002G140500 Sobic002G140500 Sobic008G028200--Sobic002G140500 Sobic008G028200--Sobic009G016700 Sobic009G096700 Sobic009G096700 Sobic010G093600--Sobic009G096700 Sobic010G093600--Sobic009G016700 Sobic010G093600--Sobic008G028100 Sobic010G093600--Sobic008G027800 Sobic010G093600--Sobic001G539700 Sobic010G093600--Sobic001G002200 Sobic010G093600--Sobic002G002600 Sobic010G093600--Sobic008G028200 Sobic010G093600--Sobic008G028300 Sobic001G002200--Sobic008G027800 Sobic001G002200--Sobic010G093600 Sobic001G002200--Sobic008G028300 Sobic001G002200--Sobic002G140500 Sobic001G002200--Sobic001G228000 Sobic001G002200--Sobic002G002600 Sobic001G002200--Sobic009G096700 Sobic001G002200--Sobic009G016700 Sobic001G002200--Sobic008G028200
Octagon: transcription factors


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