Gene annotation
Transcriptome id Sobic.001G252900.1,Sobic.001G252900.2
Synonym PPa1, AtPPa1, Sb01g022340
Functional annotation - (PubMedID : 26976818)
soluble inorganic pyrophosphatase, putative, expressed
UniProt C5WM76 , A0A1Z5S7B1
Pfam PF00719
Panther DB PTHR10286 PTHR10286:SF11 PTHR10286:SF11 PTHR10286
NCBI CDD KOG1626; Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38
KEGG Orthology K01507; inorganic pyrophosphatase
Gene Ontology GO:0006796; phosphate-containing compound metabolic process GO:0005737cytoplasm GO:0004427inorganic diphosphatase activity GO:0000287magnesium ion binding GO:0000287magnesium ion binding GO:0004427inorganic diphosphatase activity GO:0005737cytoplasm GO:0006796phosphate-containing compound metabolic process


Orthologs (automatic annotation)
TAIR AT1G01050 : pyrophosphorylase 1
RAP-DB (Rice) LOC_Os10g26600.1 : soluble inorganic pyrophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a017814
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G252900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G002800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
2 Sobic.009G082900 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.005G025600 plant invertase/pectin methylesterase inhibitor domain containing protein, expressed -
4 Sobic.003G073540 - -
5 Sobic.007G222500 - -
6 Sobic.006G263500 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.003G335200 monocopper oxidase, putative, expressed -
8 Sobic.010G006900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.001G528700 - -
10 Sobic.010G144700 plant protein of unknown function domain containing protein, expressed -
11 Sobic.005G023700 pollen allergen Cyn d 23, putative, expressed -
12 Sobic.006G159000 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
13 Sobic.009G075400 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
14 Sobic.001G348600 patatin, putative, expressed -
15 Sobic.001G412900 - -
16 Sobic.007G057600 - -
17 Sobic.008G027900 pollen allergen, putative, expressed -
18 Sobic.001G288400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.008G028000 pollen allergen, putative, expressed -
20 Sobic.007G175800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -


Gene co-expression network
sample Sobic001G252900 Sobic001G252900 Sobic004G002800 Sobic004G002800 Sobic001G252900--Sobic004G002800 Sobic009G082900 Sobic009G082900 Sobic001G252900--Sobic009G082900 Sobic005G025600 Sobic005G025600 Sobic001G252900--Sobic005G025600 Sobic003G073540 Sobic003G073540 Sobic001G252900--Sobic003G073540 Sobic007G222500 Sobic007G222500 Sobic001G252900--Sobic007G222500 Sobic006G263500 Sobic006G263500 Sobic001G252900--Sobic006G263500 Sobic003G335200 Sobic003G335200 Sobic001G252900--Sobic003G335200 Sobic010G006900 Sobic010G006900 Sobic001G252900--Sobic010G006900 Sobic001G528700 Sobic001G528700 Sobic001G252900--Sobic001G528700 Sobic004G002800--Sobic005G025600 Sobic004G002800--Sobic001G252900 Sobic004G002800--Sobic009G082900 Sobic004G002800--Sobic003G335200 Sobic004G002800--Sobic006G263500 Sobic006G159000 Sobic006G159000 Sobic004G002800--Sobic006G159000 Sobic005G023700 Sobic005G023700 Sobic004G002800--Sobic005G023700 Sobic004G002800--Sobic010G006900 Sobic004G002800--Sobic003G073540 Sobic009G082900--Sobic004G002800 Sobic010G144700 Sobic010G144700 Sobic009G082900--Sobic010G144700 Sobic009G082900--Sobic001G252900 Sobic001G288400 Sobic001G288400 Sobic009G082900--Sobic001G288400 Sobic009G082900--Sobic005G025600 Sobic009G082900--Sobic003G073540 Sobic001G093100 Sobic001G093100 Sobic009G082900--Sobic001G093100 Sobic009G082900--Sobic006G159000 Sobic009G075400 Sobic009G075400 Sobic009G082900--Sobic009G075400 Sobic005G025600--Sobic006G263500 Sobic005G025600--Sobic004G002800 Sobic005G025600--Sobic010G006900 Sobic005G025600--Sobic006G159000 Sobic005G025600--Sobic005G023700 Sobic005G025600--Sobic001G252900 Sobic005G025600--Sobic003G335200 Sobic008G028000 Sobic008G028000 Sobic005G025600--Sobic008G028000 Sobic008G027900 Sobic008G027900 Sobic005G025600--Sobic008G027900 Sobic003G073540--Sobic001G252900 Sobic003G073540--Sobic004G002800 Sobic003G073540--Sobic009G082900 Sobic003G073540--Sobic005G025600 Sobic003G073540--Sobic007G222500 Sobic003G073540--Sobic006G263500 Sobic003G073540--Sobic003G335200 Sobic003G073540--Sobic010G006900 Sobic003G073540--Sobic010G144700 Sobic007G222500--Sobic001G528700 Sobic007G222500--Sobic001G252900 Sobic001G348600 Sobic001G348600 Sobic007G222500--Sobic001G348600 Sobic008G028200 Sobic008G028200 Sobic007G222500--Sobic008G028200 Sobic007G057600 Sobic007G057600 Sobic007G222500--Sobic007G057600 Sobic007G222500--Sobic004G002800 Sobic006G171500 Sobic006G171500 Sobic007G222500--Sobic006G171500 Sobic004G166100 Sobic004G166100 Sobic007G222500--Sobic004G166100 Sobic001G228000 Sobic001G228000 Sobic007G222500--Sobic001G228000 Sobic006G263500--Sobic010G006900 Sobic006G263500--Sobic005G025600 Sobic006G263500--Sobic005G023700 Sobic006G263500--Sobic008G027900 Sobic006G263500--Sobic008G028000 Sobic006G263500--Sobic006G159000 Sobic006G263500--Sobic004G002800 Sobic009G091600 Sobic009G091600 Sobic006G263500--Sobic009G091600 Sobic004G029032 Sobic004G029032 Sobic006G263500--Sobic004G029032 Sobic003G335200--Sobic009G075400 Sobic003G335200--Sobic004G002800 Sobic003G335200--Sobic005G023700 Sobic003G335200--Sobic005G025600 Sobic003G335200--Sobic006G263500 Sobic003G335200--Sobic006G159000 Sobic002G066300 Sobic002G066300 Sobic003G335200--Sobic002G066300 Sobic003G335200--Sobic010G006900 Sobic003G335200--Sobic001G252900 Sobic010G006900--Sobic006G263500 Sobic010G006900--Sobic005G023700 Sobic010G006900--Sobic005G025600 Sobic010G006900--Sobic008G027900 Sobic010G006900--Sobic006G159000 Sobic010G006900--Sobic008G028000 Sobic010G006900--Sobic009G091600 Sobic010G006900--Sobic002G066300 Sobic010G006900--Sobic004G002800 Sobic001G528700--Sobic007G222500 Sobic001G528700--Sobic004G166100 Sobic009G102700 Sobic009G102700 Sobic001G528700--Sobic009G102700 Sobic004G024000 Sobic004G024000 Sobic001G528700--Sobic004G024000 Sobic001G528700--Sobic007G057600 Sobic001G528700--Sobic001G252900 Sobic001G528700--Sobic008G028200 Sobic010G093600 Sobic010G093600 Sobic001G528700--Sobic010G093600 Sobic001G002200 Sobic001G002200 Sobic001G528700--Sobic001G002200
Octagon: transcription factors


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