Gene annotation
Transcriptome id Sobic.010G252600.1
Synonym
Functional annotation cyclin-related protein, putative, expressed
UniProt A0A194YLB4
Pfam -
Panther DB PTHR12444 PTHR12444:SF6
NCBI CDD KOG1877; Putative transmembrane protein cmp44E
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41830 : Uncharacterized protein
RAP-DB (Rice) LOC_Os07g10550.1 : cyclin-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a041770 , Zm00025a018372 , Zm00025a043395 , Zm00025a028034
Brachypodium PNT75536 , PNT75537 , PNT75538 , PNT75539 , KQK17407
Barley HORVU7Hr1G096850.5 , HORVU7Hr1G096850.4 , HORVU7Hr1G096850.7 , HORVU7Hr1G096850.6 , HORVU7Hr1G096850.1 , HORVU7Hr1G096850.3 , HORVU7Hr1G096850.2 , HORVU7Hr1G096850.9 , HORVU7Hr1G096850.8 , HORVU6Hr1G020790.20 , HORVU7Hr1G096850.14 , HORVU7Hr1G096850.19 , HORVU7Hr1G096850.31 , HORVU7Hr1G096850.30 , HORVU6Hr1G020790.18 , HORVU6Hr1G020790.19 , HORVU6Hr1G020790.14 , HORVU6Hr1G020790.15 , HORVU6Hr1G020790.16 , HORVU6Hr1G020790.17 , HORVU6Hr1G020790.10 , HORVU6Hr1G020790.11 , HORVU6Hr1G020790.12 , HORVU6Hr1G020790.13 , HORVU6Hr1G020790.21 , HORVU6Hr1G020790.22 , HORVU6Hr1G020790.25 , HORVU6Hr1G020790.24 , HORVU6Hr1G020790.27 , HORVU6Hr1G020790.26 , HORVU6Hr1G020790.29 , HORVU6Hr1G020790.28 , HORVU7Hr1G096850.28 , HORVU7Hr1G096850.29 , HORVU7Hr1G096850.24 , HORVU7Hr1G096850.25 , HORVU7Hr1G096850.26 , HORVU7Hr1G096850.27 , HORVU7Hr1G096850.20 , HORVU7Hr1G096850.21 , HORVU7Hr1G096850.22 , HORVU7Hr1G096850.23 , HORVU6Hr1G020790.35 , HORVU6Hr1G020790.32 , HORVU6Hr1G020790.30 , HORVU6Hr1G020790.31 , HORVU6Hr1G020790.23 , HORVU7Hr1G096850.11 , HORVU7Hr1G096850.10 , HORVU7Hr1G096850.13 , HORVU7Hr1G096850.12 , HORVU7Hr1G096850.15 , HORVU7Hr1G096850.17 , HORVU7Hr1G096850.16 , HORVU7Hr1G096850.18 , HORVU6Hr1G020790.6 , HORVU6Hr1G020790.7 , HORVU6Hr1G020790.4 , HORVU6Hr1G020790.5 , HORVU6Hr1G020790.2 , HORVU6Hr1G020790.3 , HORVU6Hr1G020790.1 , HORVU6Hr1G020790.8 , HORVU6Hr1G020790.9
Wheat TraesCS7D02G410900 , TraesCS7B02G318000 , TraesCS7B02G318000 , TraesCS7B02G318000 , TraesCS7A02G417900 , TraesCS7A02G417900
Populus -


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cDNA sequences
Sobic.010G252600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G166100 pollen allergen Cyn d 23, putative, expressed -
2 Sobic.001G528700 - -
3 Sobic.007G222500 - -
4 Sobic.007G222400 - -
5 Sobic.001G348600 patatin, putative, expressed -
6 Sobic.004G024000 OsCML11 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
7 Sobic.009G016700 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
8 Sobic.008G028300 pollen allergen, putative, expressed -
9 Sobic.001G002200 myosin, putative, expressed K10357: myosin V
10 Sobic.009G102700 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
11 Sobic.010G093600 myosin, putative, expressed K10357: myosin V
12 Sobic.008G028200 pollen allergen, putative, expressed -
13 Sobic.001G228000 universal stress protein domain containing protein, putative, expressed -
14 Sobic.001G539700 expansin precursor, putative, expressed -
15 Sobic.008G028100 pollen allergen, putative, expressed -
16 Sobic.007G175800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
17 Sobic.002G140500 POEI23 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.008G027800 pollen allergen, putative, expressed -
19 Sobic.002G002600 la domain containing protein, expressed -
20 Sobic.006G171500 ZOS4-09 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic010G252600 Sobic010G252600 Sobic004G166100 Sobic004G166100 Sobic010G252600--Sobic004G166100 Sobic001G528700 Sobic001G528700 Sobic010G252600--Sobic001G528700 Sobic007G222500 Sobic007G222500 Sobic010G252600--Sobic007G222500 Sobic007G222400 Sobic007G222400 Sobic010G252600--Sobic007G222400 Sobic001G348600 Sobic001G348600 Sobic010G252600--Sobic001G348600 Sobic004G024000 Sobic004G024000 Sobic010G252600--Sobic004G024000 Sobic009G016700 Sobic009G016700 Sobic010G252600--Sobic009G016700 Sobic008G028300 Sobic008G028300 Sobic010G252600--Sobic008G028300 Sobic001G002200 Sobic001G002200 Sobic010G252600--Sobic001G002200 Sobic004G166100--Sobic004G024000 Sobic004G166100--Sobic008G028300 Sobic001G539700 Sobic001G539700 Sobic004G166100--Sobic001G539700 Sobic004G166100--Sobic001G002200 Sobic004G166100--Sobic001G528700 Sobic008G028100 Sobic008G028100 Sobic004G166100--Sobic008G028100 Sobic002G002600 Sobic002G002600 Sobic004G166100--Sobic002G002600 Sobic010G093600 Sobic010G093600 Sobic004G166100--Sobic010G093600 Sobic004G166100--Sobic007G222400 Sobic001G528700--Sobic007G222500 Sobic001G528700--Sobic004G166100 Sobic009G102700 Sobic009G102700 Sobic001G528700--Sobic009G102700 Sobic001G528700--Sobic004G024000 Sobic007G057600 Sobic007G057600 Sobic001G528700--Sobic007G057600 Sobic001G252900 Sobic001G252900 Sobic001G528700--Sobic001G252900 Sobic008G028200 Sobic008G028200 Sobic001G528700--Sobic008G028200 Sobic001G528700--Sobic010G093600 Sobic001G528700--Sobic001G002200 Sobic007G222500--Sobic001G528700 Sobic007G222500--Sobic001G252900 Sobic007G222500--Sobic001G348600 Sobic007G222500--Sobic008G028200 Sobic007G222500--Sobic007G057600 Sobic004G002800 Sobic004G002800 Sobic007G222500--Sobic004G002800 Sobic006G171500 Sobic006G171500 Sobic007G222500--Sobic006G171500 Sobic007G222500--Sobic004G166100 Sobic001G228000 Sobic001G228000 Sobic007G222500--Sobic001G228000 Sobic007G222400--Sobic009G016700 Sobic007G222400--Sobic001G539700 Sobic007G222400--Sobic008G028100 Sobic007G222400--Sobic010G093600 Sobic007G222400--Sobic008G028300 Sobic007G222400--Sobic004G166100 Sobic007G222400--Sobic002G002600 Sobic007G222400--Sobic004G024000 Sobic009G096700 Sobic009G096700 Sobic007G222400--Sobic009G096700 Sobic001G348600--Sobic006G171500 Sobic001G348600--Sobic008G028200 Sobic004G029032 Sobic004G029032 Sobic001G348600--Sobic004G029032 Sobic001G348600--Sobic007G222500 Sobic001G348600--Sobic001G228000 Sobic002G150400 Sobic002G150400 Sobic001G348600--Sobic002G150400 Sobic002G140500 Sobic002G140500 Sobic001G348600--Sobic002G140500 Sobic001G348600--Sobic001G002200 Sobic008G027800 Sobic008G027800 Sobic001G348600--Sobic008G027800 Sobic004G024000--Sobic004G166100 Sobic004G024000--Sobic001G002200 Sobic004G024000--Sobic008G028300 Sobic004G024000--Sobic007G222400 Sobic004G024000--Sobic010G093600 Sobic004G024000--Sobic001G539700 Sobic004G024000--Sobic002G002600 Sobic004G024000--Sobic009G016700 Sobic004G024000--Sobic008G028100 Sobic009G016700--Sobic010G093600 Sobic009G016700--Sobic008G028100 Sobic009G016700--Sobic001G539700 Sobic009G016700--Sobic002G002600 Sobic009G016700--Sobic007G222400 Sobic009G016700--Sobic009G096700 Sobic009G016700--Sobic008G028300 Sobic009G016700--Sobic008G027800 Sobic009G016700--Sobic001G002200 Sobic008G028300--Sobic002G002600 Sobic008G028300--Sobic008G028100 Sobic008G028300--Sobic001G539700 Sobic008G028300--Sobic001G002200 Sobic010G161400 Sobic010G161400 Sobic008G028300--Sobic010G161400 Sobic008G028300--Sobic009G016700 Sobic008G028300--Sobic010G093600 Sobic003G127200 Sobic003G127200 Sobic008G028300--Sobic003G127200 Sobic008G028300--Sobic004G166100 Sobic001G002200--Sobic008G027800 Sobic001G002200--Sobic010G093600 Sobic001G002200--Sobic008G028300 Sobic001G002200--Sobic002G140500 Sobic001G002200--Sobic001G228000 Sobic001G002200--Sobic002G002600 Sobic001G002200--Sobic009G096700 Sobic001G002200--Sobic009G016700 Sobic001G002200--Sobic008G028200
Octagon: transcription factors


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