Gene annotation
Transcriptome id Sobic.002G066300.1
Synonym Sb02g005560
Functional annotation expressed protein
UniProt A0A1B6Q9L0
Pfam PF04601
Panther DB PTHR31205 PTHR31205:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28630 : Protein of unknown function (DUF569)
RAP-DB (Rice) LOC_Os07g09384.1 : expressed protein
MaizeGDB (Corn) Zm00025a008602 , Zm00025a045282
Brachypodium PNT73959 , KQK20485 , KQK12644
Barley HORVU3Hr1G012310.4 , HORVU3Hr1G012310.2 , HORVU3Hr1G012310.3 , HORVU3Hr1G012310.1
Wheat TraesCS3A02G066800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G023700 pollen allergen Cyn d 23, putative, expressed -
2 Sobic.008G119501 - -
3 Sobic.006G282000 cytochrome c, putative, expressed K08738: cytochrome c
4 Sobic.009G091600 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
5 Sobic.003G400000 signal peptide peptidase-like 2B, putative, expressed -
6 Sobic.010G006900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.008G027900 pollen allergen, putative, expressed -
8 Sobic.001G097000 WD-40 repeat family protein, putative, expressed -
9 Sobic.006G263500 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G335200 monocopper oxidase, putative, expressed -
11 Sobic.004G242600 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G025600 plant invertase/pectin methylesterase inhibitor domain containing protein, expressed -
13 Sobic.006G159000 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
14 Sobic.001G024800 uncharacterized Cys-rich domain containing protein, putative, expressed -
15 Sobic.004G029032 - -
16 Sobic.002G303500 actin-depolymerizing factor, putative, expressed K05765: cofilin
17 Sobic.008G028000 pollen allergen, putative, expressed -
18 Sobic.009G075400 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
19 Sobic.007G112400 polygalacturonase, putative, expressed -
20 Sobic.004G002800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -


Gene co-expression network
sample Sobic002G066300 Sobic002G066300 Sobic005G023700 Sobic005G023700 Sobic002G066300--Sobic005G023700 Sobic008G119501 Sobic008G119501 Sobic002G066300--Sobic008G119501 Sobic006G282000 Sobic006G282000 Sobic002G066300--Sobic006G282000 Sobic009G091600 Sobic009G091600 Sobic002G066300--Sobic009G091600 Sobic003G400000 Sobic003G400000 Sobic002G066300--Sobic003G400000 Sobic010G006900 Sobic010G006900 Sobic002G066300--Sobic010G006900 Sobic008G027900 Sobic008G027900 Sobic002G066300--Sobic008G027900 Sobic001G097000 Sobic001G097000 Sobic002G066300--Sobic001G097000 Sobic006G263500 Sobic006G263500 Sobic002G066300--Sobic006G263500 Sobic005G023700--Sobic010G006900 Sobic005G023700--Sobic006G263500 Sobic005G023700--Sobic008G027900 Sobic005G025600 Sobic005G025600 Sobic005G023700--Sobic005G025600 Sobic005G023700--Sobic002G066300 Sobic006G159000 Sobic006G159000 Sobic005G023700--Sobic006G159000 Sobic008G028000 Sobic008G028000 Sobic005G023700--Sobic008G028000 Sobic003G335200 Sobic003G335200 Sobic005G023700--Sobic003G335200 Sobic005G023700--Sobic009G091600 Sobic008G119501--Sobic006G282000 Sobic008G119501--Sobic002G066300 Sobic008G119501--Sobic001G097000 Sobic001G024800 Sobic001G024800 Sobic008G119501--Sobic001G024800 Sobic004G242600 Sobic004G242600 Sobic008G119501--Sobic004G242600 Sobic002G303500 Sobic002G303500 Sobic008G119501--Sobic002G303500 Sobic008G119501--Sobic003G400000 Sobic008G119501--Sobic005G023700 Sobic004G029032 Sobic004G029032 Sobic008G119501--Sobic004G029032 Sobic006G282000--Sobic008G119501 Sobic006G282000--Sobic001G097000 Sobic006G282000--Sobic002G066300 Sobic006G282000--Sobic002G303500 Sobic006G282000--Sobic004G242600 Sobic006G282000--Sobic005G023700 Sobic006G282000--Sobic009G091600 Sobic006G282000--Sobic001G024800 Sobic006G282000--Sobic003G400000 Sobic009G091600--Sobic008G027900 Sobic009G091600--Sobic004G029032 Sobic009G091600--Sobic005G023700 Sobic009G091600--Sobic003G400000 Sobic009G091600--Sobic010G006900 Sobic009G091600--Sobic008G028000 Sobic009G091600--Sobic006G263500 Sobic009G091600--Sobic002G066300 Sobic007G112400 Sobic007G112400 Sobic009G091600--Sobic007G112400 Sobic003G400000--Sobic004G029032 Sobic003G400000--Sobic009G091600 Sobic003G400000--Sobic008G027900 Sobic003G400000--Sobic005G023700 Sobic003G400000--Sobic002G066300 Sobic003G400000--Sobic001G024800 Sobic003G400000--Sobic006G263500 Sobic003G400000--Sobic010G006900 Sobic006G171500 Sobic006G171500 Sobic003G400000--Sobic006G171500 Sobic010G006900--Sobic006G263500 Sobic010G006900--Sobic005G023700 Sobic010G006900--Sobic005G025600 Sobic010G006900--Sobic008G027900 Sobic010G006900--Sobic006G159000 Sobic010G006900--Sobic008G028000 Sobic010G006900--Sobic009G091600 Sobic010G006900--Sobic002G066300 Sobic004G002800 Sobic004G002800 Sobic010G006900--Sobic004G002800 Sobic008G027900--Sobic009G091600 Sobic008G027900--Sobic010G006900 Sobic008G027900--Sobic006G263500 Sobic008G027900--Sobic008G028000 Sobic008G027900--Sobic005G023700 Sobic008G027900--Sobic004G029032 Sobic008G027900--Sobic005G025600 Sobic008G027900--Sobic003G400000 Sobic008G027900--Sobic002G066300 Sobic001G097000--Sobic006G282000 Sobic001G097000--Sobic008G119501 Sobic001G097000--Sobic002G066300 Sobic001G097000--Sobic002G303500 Sobic001G097000--Sobic005G023700 Sobic001G097000--Sobic004G242600 Sobic001G097000--Sobic003G335200 Sobic001G097000--Sobic009G091600 Sobic001G097000--Sobic003G400000 Sobic006G263500--Sobic010G006900 Sobic006G263500--Sobic005G025600 Sobic006G263500--Sobic005G023700 Sobic006G263500--Sobic008G027900 Sobic006G263500--Sobic008G028000 Sobic006G263500--Sobic006G159000 Sobic006G263500--Sobic004G002800 Sobic006G263500--Sobic009G091600 Sobic006G263500--Sobic004G029032
Octagon: transcription factors


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