Gene annotation
Transcriptome id Sobic.010G001200.7,Sobic.010G001200.4,Sobic.010G001200.5,Sobic.010G001200.6
Synonym Sb10g000320
Functional annotation CCT/B-box zinc finger protein, putative, expressed
UniProt A0A1W0VQZ7
Pfam PF06203
Panther DB PTHR31717 PTHR31717:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G21880 : B-box type zinc finger protein with CCT domain
RAP-DB (Rice) LOC_Os02g01990.1 : CCT motif family protein, expressed
MaizeGDB (Corn) Zm00025a050364
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G135950 - -
2 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
3 Sobic.004G099200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
4 Sobic.004G071900 expressed protein -
5 Sobic.002G125100 - -
6 Sobic.001G525600 fringe-related protein, putative, expressed -
7 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
8 Sobic.006G215500 OsFBX114 - F-box domain containing protein, expressed -
9 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
10 Sobic.002G384500 expressed protein -
11 Sobic.003G313200 expressed protein -
12 Sobic.009G105100 expressed protein -
13 Sobic.006G022700 OsFBD9 - F-box and FBD domain containing protein, expressed -
14 Sobic.004G273600 RNA recognition motif containing protein, putative, expressed -
15 Sobic.002G254700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
16 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
17 Sobic.010G276100 transporter family protein, putative, expressed -
18 Sobic.001G109900 expressed protein -
19 Sobic.009G102700 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
20 Sobic.009G175400 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E


Gene co-expression network
sample Sobic010G001200 Sobic010G001200 Sobic001G135950 Sobic001G135950 Sobic010G001200--Sobic001G135950 Sobic002G279900 Sobic002G279900 Sobic010G001200--Sobic002G279900 Sobic004G099200 Sobic004G099200 Sobic010G001200--Sobic004G099200 Sobic004G071900 Sobic004G071900 Sobic010G001200--Sobic004G071900 Sobic002G125100 Sobic002G125100 Sobic010G001200--Sobic002G125100 Sobic001G525600 Sobic001G525600 Sobic010G001200--Sobic001G525600 Sobic005G145400 Sobic005G145400 Sobic010G001200--Sobic005G145400 Sobic006G215500 Sobic006G215500 Sobic010G001200--Sobic006G215500 Sobic003G420500 Sobic003G420500 Sobic010G001200--Sobic003G420500 Sobic001G135950--Sobic004G071900 Sobic001G135950--Sobic002G125100 Sobic001G135950--Sobic006G215500 Sobic001G135950--Sobic004G099200 Sobic001G135950--Sobic002G279900 Sobic001G135950--Sobic010G001200 Sobic001G135950--Sobic001G525600 Sobic001G135950--Sobic005G145400 Sobic003G313200 Sobic003G313200 Sobic001G135950--Sobic003G313200 Sobic002G279900--Sobic001G135950 Sobic002G279900--Sobic002G125100 Sobic002G279900--Sobic004G071900 Sobic002G279900--Sobic006G215500 Sobic002G279900--Sobic010G001200 Sobic002G279900--Sobic004G099200 Sobic002G279900--Sobic001G525600 Sobic002G279900--Sobic003G313200 Sobic006G022700 Sobic006G022700 Sobic002G279900--Sobic006G022700 Sobic004G099200--Sobic001G135950 Sobic004G099200--Sobic001G525600 Sobic004G099200--Sobic004G071900 Sobic004G099200--Sobic005G145400 Sobic004G099200--Sobic002G125100 Sobic004G099200--Sobic006G215500 Sobic004G099200--Sobic003G313200 Sobic010G276100 Sobic010G276100 Sobic004G099200--Sobic010G276100 Sobic004G099200--Sobic002G279900 Sobic004G071900--Sobic006G215500 Sobic004G071900--Sobic001G135950 Sobic004G071900--Sobic002G125100 Sobic004G071900--Sobic004G099200 Sobic009G105100 Sobic009G105100 Sobic004G071900--Sobic009G105100 Sobic009G102700 Sobic009G102700 Sobic004G071900--Sobic009G102700 Sobic004G071900--Sobic003G313200 Sobic004G071900--Sobic006G022700 Sobic004G071900--Sobic002G279900 Sobic002G125100--Sobic001G135950 Sobic002G125100--Sobic004G071900 Sobic002G125100--Sobic006G215500 Sobic002G125100--Sobic004G099200 Sobic002G125100--Sobic002G279900 Sobic002G125100--Sobic009G105100 Sobic002G125100--Sobic010G001200 Sobic002G125100--Sobic001G525600 Sobic002G125100--Sobic003G313200 Sobic001G525600--Sobic004G099200 Sobic001G525600--Sobic001G135950 Sobic001G525600--Sobic005G145400 Sobic001G525600--Sobic003G313200 Sobic001G525600--Sobic003G420500 Sobic001G525600--Sobic004G071900 Sobic001G525600--Sobic002G279900 Sobic001G525600--Sobic002G125100 Sobic001G525600--Sobic006G215500 Sobic005G145400--Sobic003G420500 Sobic008G043200 Sobic008G043200 Sobic005G145400--Sobic008G043200 Sobic009G175400 Sobic009G175400 Sobic005G145400--Sobic009G175400 Sobic005G145400--Sobic010G276100 Sobic005G145400--Sobic004G099200 Sobic005G145400--Sobic001G135950 Sobic005G037700 Sobic005G037700 Sobic005G145400--Sobic005G037700 Sobic010G040400 Sobic010G040400 Sobic005G145400--Sobic010G040400 Sobic005G145400--Sobic001G525600 Sobic006G215500--Sobic004G071900 Sobic006G215500--Sobic001G135950 Sobic006G215500--Sobic006G022700 Sobic006G215500--Sobic002G125100 Sobic006G215500--Sobic003G313200 Sobic001G220800 Sobic001G220800 Sobic006G215500--Sobic001G220800 Sobic004G025500 Sobic004G025500 Sobic006G215500--Sobic004G025500 Sobic006G215500--Sobic009G102700 Sobic006G215500--Sobic004G099200 Sobic003G420500--Sobic005G145400 Sobic003G420500--Sobic005G037700 Sobic003G420500--Sobic008G043200 Sobic003G420500--Sobic001G525600 Sobic001G089400 Sobic001G089400 Sobic003G420500--Sobic001G089400 Sobic004G192600 Sobic004G192600 Sobic003G420500--Sobic004G192600 Sobic003G420500--Sobic004G099200 Sobic010G016200 Sobic010G016200 Sobic003G420500--Sobic010G016200 Sobic007G197000 Sobic007G197000 Sobic003G420500--Sobic007G197000
Octagon: transcription factors


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