Gene annotation
Transcriptome id Sobic.001G092500.1
Synonym Sb01g008340
Functional annotation protein kinase domain containing protein, expressed
UniProt C5X171
Pfam PF07714
Panther DB PTHR23257 PTHR23257:SF353
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G22750 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g53410.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008124 , Zm00025a016821
Brachypodium PNT74148 , PNT74149 , PNT74147 , PNT74151 , PNT74150
Barley HORVU5Hr1G094510.2
Wheat TraesCS2D02G427800 , TraesCS5D02G393800 , TraesCS5B02G389000 , TraesCS2A02G430200 , TraesCS5A02G384200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G040400 polygalacturonase, putative, expressed -
2 Sobic.010G276100 transporter family protein, putative, expressed -
3 Sobic.005G191300 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.009G175400 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
5 Sobic.008G043200 - -
6 Sobic.010G016200 expressed protein -
7 Sobic.008G043300 - -
8 Sobic.001G332000 pollen allergen, putative, expressed -
9 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
10 Sobic.010G144700 plant protein of unknown function domain containing protein, expressed -
11 Sobic.005G040700 amino acid permease family protein, putative, expressed -
12 Sobic.001G287400 VQ domain containing protein, putative, expressed -
13 Sobic.009G082900 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.009G075400 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
15 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
16 Sobic.007G042800 expressed protein -
17 Sobic.005G204600 OsMADS68 - MADS-box family gene with MIKC , type-box, expressed -
18 Sobic.001G130500 - -
19 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
20 Sobic.006G259100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1


Gene co-expression network
sample Sobic001G092500 Sobic001G092500 Sobic010G040400 Sobic010G040400 Sobic001G092500--Sobic010G040400 Sobic010G276100 Sobic010G276100 Sobic001G092500--Sobic010G276100 Sobic005G191300 Sobic005G191300 Sobic001G092500--Sobic005G191300 Sobic009G175400 Sobic009G175400 Sobic001G092500--Sobic009G175400 Sobic008G043200 Sobic008G043200 Sobic001G092500--Sobic008G043200 Sobic010G016200 Sobic010G016200 Sobic001G092500--Sobic010G016200 Sobic008G043300 Sobic008G043300 Sobic001G092500--Sobic008G043300 Sobic001G332000 Sobic001G332000 Sobic001G092500--Sobic001G332000 Sobic005G145400 Sobic005G145400 Sobic001G092500--Sobic005G145400 Sobic010G040400--Sobic009G175400 Sobic010G040400--Sobic010G276100 Sobic010G144700 Sobic010G144700 Sobic010G040400--Sobic010G144700 Sobic010G040400--Sobic001G332000 Sobic005G040700 Sobic005G040700 Sobic010G040400--Sobic005G040700 Sobic010G040400--Sobic001G092500 Sobic009G082900 Sobic009G082900 Sobic010G040400--Sobic009G082900 Sobic010G051000 Sobic010G051000 Sobic010G040400--Sobic010G051000 Sobic001G288400 Sobic001G288400 Sobic010G040400--Sobic001G288400 Sobic010G276100--Sobic009G175400 Sobic010G276100--Sobic010G040400 Sobic010G276100--Sobic010G144700 Sobic010G276100--Sobic009G082900 Sobic010G276100--Sobic001G092500 Sobic006G259100 Sobic006G259100 Sobic010G276100--Sobic006G259100 Sobic010G276100--Sobic005G145400 Sobic004G002800 Sobic004G002800 Sobic010G276100--Sobic004G002800 Sobic001G252900 Sobic001G252900 Sobic010G276100--Sobic001G252900 Sobic005G191300--Sobic001G092500 Sobic007G042800 Sobic007G042800 Sobic005G191300--Sobic007G042800 Sobic005G191300--Sobic008G043300 Sobic005G204600 Sobic005G204600 Sobic005G191300--Sobic005G204600 Sobic005G191300--Sobic010G040400 Sobic005G191300--Sobic010G016200 Sobic005G191300--Sobic010G276100 Sobic009G110700 Sobic009G110700 Sobic005G191300--Sobic009G110700 Sobic005G191300--Sobic008G043200 Sobic009G175400--Sobic010G276100 Sobic009G175400--Sobic010G144700 Sobic009G175400--Sobic010G040400 Sobic009G175400--Sobic009G082900 Sobic009G175400--Sobic001G332000 Sobic009G175400--Sobic008G043200 Sobic009G175400--Sobic005G040700 Sobic009G175400--Sobic001G288400 Sobic009G175400--Sobic005G145400 Sobic008G043200--Sobic010G016200 Sobic008G043200--Sobic005G145400 Sobic008G043200--Sobic009G175400 Sobic001G089400 Sobic001G089400 Sobic008G043200--Sobic001G089400 Sobic008G043200--Sobic010G040400 Sobic007G215200 Sobic007G215200 Sobic008G043200--Sobic007G215200 Sobic008G043200--Sobic001G092500 Sobic010G207800 Sobic010G207800 Sobic008G043200--Sobic010G207800 Sobic008G043200--Sobic001G332000 Sobic010G016200--Sobic008G043200 Sobic010G016200--Sobic010G040400 Sobic010G016200--Sobic001G092500 Sobic010G016200--Sobic009G175400 Sobic010G016200--Sobic007G215200 Sobic010G016200--Sobic001G332000 Sobic010G016200--Sobic010G207800 Sobic010G016200--Sobic005G145400 Sobic010G016200--Sobic001G089400 Sobic009G075400 Sobic009G075400 Sobic008G043300--Sobic009G075400 Sobic008G053750 Sobic008G053750 Sobic008G043300--Sobic008G053750 Sobic003G335200 Sobic003G335200 Sobic008G043300--Sobic003G335200 Sobic004G134000 Sobic004G134000 Sobic008G043300--Sobic004G134000 Sobic008G043300--Sobic001G288400 Sobic001G093100 Sobic001G093100 Sobic008G043300--Sobic001G093100 Sobic008G043300--Sobic004G002800 Sobic008G043300--Sobic009G082900 Sobic001G024900 Sobic001G024900 Sobic008G043300--Sobic001G024900 Sobic001G329200 Sobic001G329200 Sobic001G332000--Sobic001G329200 Sobic001G130500 Sobic001G130500 Sobic001G332000--Sobic001G130500 Sobic003G175950 Sobic003G175950 Sobic001G332000--Sobic003G175950 Sobic001G332000--Sobic005G040700 Sobic001G287400 Sobic001G287400 Sobic001G332000--Sobic001G287400 Sobic001G171300 Sobic001G171300 Sobic001G332000--Sobic001G171300 Sobic001G332000--Sobic010G051000 Sobic001G269100 Sobic001G269100 Sobic001G332000--Sobic001G269100 Sobic001G261416 Sobic001G261416 Sobic001G332000--Sobic001G261416 Sobic003G420500 Sobic003G420500 Sobic005G145400--Sobic003G420500 Sobic005G145400--Sobic008G043200 Sobic005G145400--Sobic009G175400 Sobic005G145400--Sobic010G276100 Sobic004G099200 Sobic004G099200 Sobic005G145400--Sobic004G099200 Sobic001G135950 Sobic001G135950 Sobic005G145400--Sobic001G135950 Sobic005G037700 Sobic005G037700 Sobic005G145400--Sobic005G037700 Sobic005G145400--Sobic010G040400 Sobic001G525600 Sobic001G525600 Sobic005G145400--Sobic001G525600
Octagon: transcription factors


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