Gene annotation
Transcriptome id Sobic.005G191300.1
Synonym BPM2, Sb05g024790, ATBPM2
Functional annotation MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt Q8LJX0 , A0A1Z5RJC1
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF168
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os11g40680.1 : MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium PNT63293 , KQJ91963 , KQJ87683 , KQJ87843 , KQJ87842
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G191300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G092500 protein kinase domain containing protein, expressed -
2 Sobic.007G042800 expressed protein -
3 Sobic.008G043300 - -
4 Sobic.005G204600 OsMADS68 - MADS-box family gene with MIKC , type-box, expressed -
5 Sobic.010G040400 polygalacturonase, putative, expressed -
6 Sobic.010G016200 expressed protein -
7 Sobic.010G276100 transporter family protein, putative, expressed -
8 Sobic.009G110700 OsFBL58 - F-box domain and LRR containing protein, expressed -
9 Sobic.008G043200 - -
10 Sobic.008G169101 - -
11 Sobic.001G287400 VQ domain containing protein, putative, expressed -
12 Sobic.009G175400 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
13 Sobic.009G075400 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
14 Sobic.001G332000 pollen allergen, putative, expressed -
15 Sobic.005G040700 amino acid permease family protein, putative, expressed -
16 Sobic.001G525600 fringe-related protein, putative, expressed -
17 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
18 Sobic.004G134000 - -
19 Sobic.001G109900 expressed protein -
20 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase


Gene co-expression network
sample Sobic005G191300 Sobic005G191300 Sobic001G092500 Sobic001G092500 Sobic005G191300--Sobic001G092500 Sobic007G042800 Sobic007G042800 Sobic005G191300--Sobic007G042800 Sobic008G043300 Sobic008G043300 Sobic005G191300--Sobic008G043300 Sobic005G204600 Sobic005G204600 Sobic005G191300--Sobic005G204600 Sobic010G040400 Sobic010G040400 Sobic005G191300--Sobic010G040400 Sobic010G016200 Sobic010G016200 Sobic005G191300--Sobic010G016200 Sobic010G276100 Sobic010G276100 Sobic005G191300--Sobic010G276100 Sobic009G110700 Sobic009G110700 Sobic005G191300--Sobic009G110700 Sobic008G043200 Sobic008G043200 Sobic005G191300--Sobic008G043200 Sobic001G092500--Sobic010G040400 Sobic001G092500--Sobic010G276100 Sobic001G092500--Sobic005G191300 Sobic009G175400 Sobic009G175400 Sobic001G092500--Sobic009G175400 Sobic001G092500--Sobic008G043200 Sobic001G092500--Sobic010G016200 Sobic001G092500--Sobic008G043300 Sobic001G332000 Sobic001G332000 Sobic001G092500--Sobic001G332000 Sobic005G145400 Sobic005G145400 Sobic001G092500--Sobic005G145400 Sobic007G042800--Sobic005G191300 Sobic007G042800--Sobic001G092500 Sobic007G042800--Sobic008G043300 Sobic007G042800--Sobic005G204600 Sobic004G134000 Sobic004G134000 Sobic007G042800--Sobic004G134000 Sobic009G075400 Sobic009G075400 Sobic007G042800--Sobic009G075400 Sobic007G042800--Sobic010G040400 Sobic007G042800--Sobic010G276100 Sobic001G109900 Sobic001G109900 Sobic007G042800--Sobic001G109900 Sobic008G043300--Sobic009G075400 Sobic008G053750 Sobic008G053750 Sobic008G043300--Sobic008G053750 Sobic003G335200 Sobic003G335200 Sobic008G043300--Sobic003G335200 Sobic008G043300--Sobic004G134000 Sobic001G288400 Sobic001G288400 Sobic008G043300--Sobic001G288400 Sobic001G093100 Sobic001G093100 Sobic008G043300--Sobic001G093100 Sobic004G002800 Sobic004G002800 Sobic008G043300--Sobic004G002800 Sobic009G082900 Sobic009G082900 Sobic008G043300--Sobic009G082900 Sobic001G024900 Sobic001G024900 Sobic008G043300--Sobic001G024900 Sobic005G204600--Sobic008G043300 Sobic005G204600--Sobic001G092500 Sobic001G287400 Sobic001G287400 Sobic005G204600--Sobic001G287400 Sobic007G145500 Sobic007G145500 Sobic005G204600--Sobic007G145500 Sobic005G204600--Sobic008G053750 Sobic005G040700 Sobic005G040700 Sobic005G204600--Sobic005G040700 Sobic007G131000 Sobic007G131000 Sobic005G204600--Sobic007G131000 Sobic001G171300 Sobic001G171300 Sobic005G204600--Sobic001G171300 Sobic001G130500 Sobic001G130500 Sobic005G204600--Sobic001G130500 Sobic010G040400--Sobic009G175400 Sobic010G040400--Sobic010G276100 Sobic010G144700 Sobic010G144700 Sobic010G040400--Sobic010G144700 Sobic010G040400--Sobic001G332000 Sobic010G040400--Sobic005G040700 Sobic010G040400--Sobic001G092500 Sobic010G040400--Sobic009G082900 Sobic010G051000 Sobic010G051000 Sobic010G040400--Sobic010G051000 Sobic010G040400--Sobic001G288400 Sobic010G016200--Sobic008G043200 Sobic010G016200--Sobic010G040400 Sobic010G016200--Sobic001G092500 Sobic010G016200--Sobic009G175400 Sobic007G215200 Sobic007G215200 Sobic010G016200--Sobic007G215200 Sobic010G016200--Sobic001G332000 Sobic010G207800 Sobic010G207800 Sobic010G016200--Sobic010G207800 Sobic010G016200--Sobic005G145400 Sobic001G089400 Sobic001G089400 Sobic010G016200--Sobic001G089400 Sobic010G276100--Sobic009G175400 Sobic010G276100--Sobic010G040400 Sobic010G276100--Sobic010G144700 Sobic010G276100--Sobic009G082900 Sobic010G276100--Sobic001G092500 Sobic006G259100 Sobic006G259100 Sobic010G276100--Sobic006G259100 Sobic010G276100--Sobic005G145400 Sobic010G276100--Sobic004G002800 Sobic001G252900 Sobic001G252900 Sobic010G276100--Sobic001G252900 Sobic003G245300 Sobic003G245300 Sobic009G110700--Sobic003G245300 Sobic007G122600 Sobic007G122600 Sobic009G110700--Sobic007G122600 Sobic008G024200 Sobic008G024200 Sobic009G110700--Sobic008G024200 Sobic009G047100 Sobic009G047100 Sobic009G110700--Sobic009G047100 Sobic005G006100 Sobic005G006100 Sobic009G110700--Sobic005G006100 Sobic001G167300 Sobic001G167300 Sobic009G110700--Sobic001G167300 Sobic010G216100 Sobic010G216100 Sobic009G110700--Sobic010G216100 Sobic009G110700--Sobic010G207800 Sobic001G192300 Sobic001G192300 Sobic009G110700--Sobic001G192300 Sobic008G043200--Sobic010G016200 Sobic008G043200--Sobic005G145400 Sobic008G043200--Sobic009G175400 Sobic008G043200--Sobic001G089400 Sobic008G043200--Sobic010G040400 Sobic008G043200--Sobic007G215200 Sobic008G043200--Sobic001G092500 Sobic008G043200--Sobic010G207800 Sobic008G043200--Sobic001G332000
Octagon: transcription factors


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