Gene annotation
Transcriptome id Sobic.007G197000.1
Synonym Sb07g026540
Functional annotation "Candidate orthologue to the wheat Pm40 gene, probable glucan endo-1,3-betaglucosidase A6" (PubMedID : 27755575)
glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5YI54
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G07320 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os08g41410.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a005220 , Zm00025a047548
Brachypodium PNT68470
Barley -
Wheat TraesCS7D02G257600 , TraesCS5B02G279000 , TraesCS5B02G279000 , TraesCS5B02G279000 , TraesCS7B02G153600 , TraesCS7A02G256800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
2 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
3 Sobic.004G192600 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.001G089400 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
5 Sobic.003G004000 - -
6 Sobic.008G043200 - -
7 Sobic.007G204200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
9 Sobic.001G525600 fringe-related protein, putative, expressed -
10 Sobic.010G016200 expressed protein -
11 Sobic.003G070400 expressed protein -
12 Sobic.001G092500 protein kinase domain containing protein, expressed -
13 Sobic.001G167300 - -
14 Sobic.008G169101 - -
15 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
16 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.004G099200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
18 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
19 Sobic.005G191300 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.009G068400 SSRP1-like FACT complex subunit, putative, expressed K09272: structure-specific recognition protein 1


Gene co-expression network
sample Sobic007G197000 Sobic007G197000 Sobic005G037700 Sobic005G037700 Sobic007G197000--Sobic005G037700 Sobic003G420500 Sobic003G420500 Sobic007G197000--Sobic003G420500 Sobic004G192600 Sobic004G192600 Sobic007G197000--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic007G197000--Sobic001G089400 Sobic003G004000 Sobic003G004000 Sobic007G197000--Sobic003G004000 Sobic008G043200 Sobic008G043200 Sobic007G197000--Sobic008G043200 Sobic007G204200 Sobic007G204200 Sobic007G197000--Sobic007G204200 Sobic005G145400 Sobic005G145400 Sobic007G197000--Sobic005G145400 Sobic001G525600 Sobic001G525600 Sobic007G197000--Sobic001G525600 Sobic005G037700--Sobic003G420500 Sobic005G037700--Sobic001G089400 Sobic005G037700--Sobic004G192600 Sobic005G037700--Sobic005G145400 Sobic005G037700--Sobic007G204200 Sobic005G037700--Sobic007G197000 Sobic005G037700--Sobic003G004000 Sobic005G037700--Sobic008G043200 Sobic005G037700--Sobic001G525600 Sobic003G420500--Sobic005G145400 Sobic003G420500--Sobic005G037700 Sobic003G420500--Sobic008G043200 Sobic003G420500--Sobic001G525600 Sobic003G420500--Sobic001G089400 Sobic003G420500--Sobic004G192600 Sobic004G099200 Sobic004G099200 Sobic003G420500--Sobic004G099200 Sobic010G016200 Sobic010G016200 Sobic003G420500--Sobic010G016200 Sobic003G420500--Sobic007G197000 Sobic004G192600--Sobic001G089400 Sobic004G192600--Sobic003G004000 Sobic001G167300 Sobic001G167300 Sobic004G192600--Sobic001G167300 Sobic004G192600--Sobic008G043200 Sobic004G192600--Sobic005G037700 Sobic010G207800 Sobic010G207800 Sobic004G192600--Sobic010G207800 Sobic004G192600--Sobic003G420500 Sobic004G192600--Sobic010G016200 Sobic007G215200 Sobic007G215200 Sobic004G192600--Sobic007G215200 Sobic001G089400--Sobic004G192600 Sobic001G089400--Sobic003G004000 Sobic001G089400--Sobic008G043200 Sobic001G089400--Sobic001G167300 Sobic001G089400--Sobic005G037700 Sobic001G089400--Sobic010G207800 Sobic001G089400--Sobic010G016200 Sobic001G089400--Sobic003G420500 Sobic001G089400--Sobic007G215200 Sobic003G004000--Sobic001G167300 Sobic003G004000--Sobic004G192600 Sobic003G004000--Sobic001G089400 Sobic003G004000--Sobic008G043200 Sobic008G024200 Sobic008G024200 Sobic003G004000--Sobic008G024200 Sobic003G004000--Sobic010G207800 Sobic010G121700 Sobic010G121700 Sobic003G004000--Sobic010G121700 Sobic005G006100 Sobic005G006100 Sobic003G004000--Sobic005G006100 Sobic009G234900 Sobic009G234900 Sobic003G004000--Sobic009G234900 Sobic008G043200--Sobic010G016200 Sobic008G043200--Sobic005G145400 Sobic009G175400 Sobic009G175400 Sobic008G043200--Sobic009G175400 Sobic008G043200--Sobic001G089400 Sobic010G040400 Sobic010G040400 Sobic008G043200--Sobic010G040400 Sobic008G043200--Sobic007G215200 Sobic001G092500 Sobic001G092500 Sobic008G043200--Sobic001G092500 Sobic008G043200--Sobic010G207800 Sobic001G332000 Sobic001G332000 Sobic008G043200--Sobic001G332000 Sobic007G204200--Sobic005G037700 Sobic007G204200--Sobic004G192600 Sobic008G074100 Sobic008G074100 Sobic007G204200--Sobic008G074100 Sobic007G204200--Sobic001G089400 Sobic007G204200--Sobic003G004000 Sobic007G204200--Sobic007G197000 Sobic007G204200--Sobic003G420500 Sobic007G204200--Sobic010G121700 Sobic003G070400 Sobic003G070400 Sobic007G204200--Sobic003G070400 Sobic005G145400--Sobic003G420500 Sobic005G145400--Sobic008G043200 Sobic005G145400--Sobic009G175400 Sobic010G276100 Sobic010G276100 Sobic005G145400--Sobic010G276100 Sobic005G145400--Sobic004G099200 Sobic001G135950 Sobic001G135950 Sobic005G145400--Sobic001G135950 Sobic005G145400--Sobic005G037700 Sobic005G145400--Sobic010G040400 Sobic005G145400--Sobic001G525600 Sobic001G525600--Sobic004G099200 Sobic001G525600--Sobic001G135950 Sobic001G525600--Sobic005G145400 Sobic003G313200 Sobic003G313200 Sobic001G525600--Sobic003G313200 Sobic001G525600--Sobic003G420500 Sobic004G071900 Sobic004G071900 Sobic001G525600--Sobic004G071900 Sobic002G279900 Sobic002G279900 Sobic001G525600--Sobic002G279900 Sobic002G125100 Sobic002G125100 Sobic001G525600--Sobic002G125100 Sobic006G215500 Sobic006G215500 Sobic001G525600--Sobic006G215500
Octagon: transcription factors


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