Gene annotation
| Transcriptome id | Sobic.003G070400.1 |
|---|---|
| Synonym | |
| Functional annotation | expressed protein |
| UniProt | A0A1B6Q1S0 |
| Pfam | PF07762 |
| Panther DB | PTHR33074 PTHR33074:SF17 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os03g07750.1 : expressed protein |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | TraesCS5B02G433600 , TraesCS5A02G431900 , TraesCS5B02G433700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G197000 | "Candidate orthologue to the wheat Pm40 gene, probable glucan endo-1,3-betaglucosidase A6"(PubMedID : 27755575)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed | - |
| 2 | Sobic.007G204200 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 3 | Sobic.010G121700 | plastocyanin-like domain containing protein, putative, expressed | - |
| 4 | Sobic.009G068400 | SSRP1-like FACT complex subunit, putative, expressed | K09272: structure-specific recognition protein 1 |
| 5 | Sobic.009G234900 | WRKY43, expressed | - |
| 6 | Sobic.008G024200 | L11 domain containing ribosomal protein, putative, expressed | K02867: RP-L11, MRPL11, large subunit ribosomal protein L11 |
| 7 | Sobic.003G004000 | - | - |
| 8 | Sobic.005G037700 | OsFBX378 - F-box domain containing protein, expressed | - |
| 9 | Sobic.009G047100 | GEX1, putative, expressed | - |
| 10 | Sobic.001G089300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed | K05349: beta-glucosidase |
| 11 | Sobic.004G192600 | LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 12 | Sobic.001G089400 | ammonium transporter protein, putative, expressed | K03320: amt, AMT, ammonium transporter, Amt family |
| 13 | Sobic.005G189100 | transcription factor Dp, putative, expressed | - |
| 14 | Sobic.004G100300 | plastocyanin-like domain containing protein, putative, expressed | - |
| 15 | Sobic.005G176700 | methyltransferase, putative, expressed | - |
| 16 | Sobic.002G156400 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed | K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1 |
| 17 | Sobic.007G031200 | - | - |
| 18 | Sobic.001G167300 | - | - |
| 19 | Sobic.002G006200 | - | - |
| 20 | Sobic.008G138400 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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