Gene annotation
Transcriptome id Sobic.005G176700.1
Synonym Sb05g023610
Functional annotation methyltransferase, putative, expressed
UniProt C5Y5T4
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF922
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G26850 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os11g38860.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a015857 , Zm00025a021496 , Zm00025a032303
Brachypodium KQJ87914
Barley HORVU1Hr1G051470.9 , HORVU1Hr1G051470.1 , HORVU1Hr1G051470.2 , HORVU1Hr1G051470.3 , HORVU1Hr1G051470.4 , HORVU1Hr1G051470.5 , HORVU1Hr1G051470.6 , HORVU1Hr1G051470.7 , HORVU4Hr1G033650.6 , HORVU4Hr1G033650.5 , HORVU4Hr1G033650.4 , HORVU4Hr1G033650.11 , HORVU4Hr1G033650.10 , HORVU4Hr1G033650.13 , HORVU4Hr1G033650.12 , HORVU4Hr1G033650.9 , HORVU4Hr1G033650.8 , HORVU4Hr1G033650.3 , HORVU4Hr1G033650.2 , HORVU4Hr1G033650.7
Wheat TraesCS4D02G150500 , TraesCS4A02G163200 , TraesCS4B02G125500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
3 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
4 Sobic.005G189100 transcription factor Dp, putative, expressed -
5 Sobic.009G234900 WRKY43, expressed -
6 Sobic.002G006200 - -
7 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
8 Sobic.001G167300 - -
9 Sobic.001G143700 cupin domain containing protein, expressed -
10 Sobic.008G138400 expressed protein -
11 Sobic.009G047100 GEX1, putative, expressed -
12 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
13 Sobic.005G148000 - -
14 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
15 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
16 Sobic.005G040100 expressed protein -
17 Sobic.003G004000 - -
18 Sobic.005G006100 hypothetical protein -
19 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
20 Sobic.007G134501 - -


Gene co-expression network
sample Sobic005G176700 Sobic005G176700 Sobic010G121700 Sobic010G121700 Sobic005G176700--Sobic010G121700 Sobic008G020800 Sobic008G020800 Sobic005G176700--Sobic008G020800 Sobic008G024200 Sobic008G024200 Sobic005G176700--Sobic008G024200 Sobic005G189100 Sobic005G189100 Sobic005G176700--Sobic005G189100 Sobic009G234900 Sobic009G234900 Sobic005G176700--Sobic009G234900 Sobic002G006200 Sobic002G006200 Sobic005G176700--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic005G176700--Sobic001G089300 Sobic001G167300 Sobic001G167300 Sobic005G176700--Sobic001G167300 Sobic001G143700 Sobic001G143700 Sobic005G176700--Sobic001G143700 Sobic010G121700--Sobic009G234900 Sobic010G121700--Sobic005G189100 Sobic010G121700--Sobic008G024200 Sobic010G121700--Sobic001G089300 Sobic009G047100 Sobic009G047100 Sobic010G121700--Sobic009G047100 Sobic010G121700--Sobic002G006200 Sobic002G156400 Sobic002G156400 Sobic010G121700--Sobic002G156400 Sobic008G138400 Sobic008G138400 Sobic010G121700--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic010G121700--Sobic002G097300 Sobic008G020800--Sobic005G176700 Sobic008G020800--Sobic001G167300 Sobic005G006100 Sobic005G006100 Sobic008G020800--Sobic005G006100 Sobic007G122600 Sobic007G122600 Sobic008G020800--Sobic007G122600 Sobic006G070032 Sobic006G070032 Sobic008G020800--Sobic006G070032 Sobic007G215200 Sobic007G215200 Sobic008G020800--Sobic007G215200 Sobic002G194201 Sobic002G194201 Sobic008G020800--Sobic002G194201 Sobic010G207800 Sobic010G207800 Sobic008G020800--Sobic010G207800 Sobic002G015900 Sobic002G015900 Sobic008G020800--Sobic002G015900 Sobic008G024200--Sobic009G047100 Sobic008G024200--Sobic009G234900 Sobic008G024200--Sobic010G121700 Sobic008G024200--Sobic005G189100 Sobic008G024200--Sobic002G006200 Sobic008G024200--Sobic001G089300 Sobic008G024200--Sobic001G143700 Sobic008G024200--Sobic001G167300 Sobic008G024200--Sobic008G138400 Sobic005G189100--Sobic002G006200 Sobic005G189100--Sobic001G089300 Sobic005G189100--Sobic009G234900 Sobic005G189100--Sobic008G138400 Sobic005G189100--Sobic001G143700 Sobic005G189100--Sobic002G097300 Sobic005G189100--Sobic010G121700 Sobic005G189100--Sobic008G024200 Sobic005G189100--Sobic002G156400 Sobic009G234900--Sobic005G189100 Sobic009G234900--Sobic010G121700 Sobic009G234900--Sobic001G089300 Sobic009G234900--Sobic008G024200 Sobic009G234900--Sobic002G006200 Sobic009G234900--Sobic009G047100 Sobic009G234900--Sobic008G138400 Sobic009G234900--Sobic002G156400 Sobic009G234900--Sobic001G143700 Sobic002G006200--Sobic005G189100 Sobic002G006200--Sobic001G143700 Sobic002G006200--Sobic002G097300 Sobic002G006200--Sobic008G138400 Sobic002G006200--Sobic001G089300 Sobic005G148000 Sobic005G148000 Sobic002G006200--Sobic005G148000 Sobic002G006200--Sobic009G234900 Sobic002G006200--Sobic008G024200 Sobic002G006200--Sobic009G047100 Sobic001G089300--Sobic005G189100 Sobic001G089300--Sobic009G234900 Sobic001G089300--Sobic002G006200 Sobic001G089300--Sobic008G138400 Sobic001G089300--Sobic010G121700 Sobic001G089300--Sobic002G097300 Sobic001G089300--Sobic002G156400 Sobic001G089300--Sobic008G024200 Sobic001G089300--Sobic001G143700 Sobic003G004000 Sobic003G004000 Sobic001G167300--Sobic003G004000 Sobic001G167300--Sobic005G006100 Sobic001G167300--Sobic010G207800 Sobic001G167300--Sobic007G122600 Sobic001G167300--Sobic008G024200 Sobic004G192600 Sobic004G192600 Sobic001G167300--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic001G167300--Sobic001G089400 Sobic001G167300--Sobic009G234900 Sobic001G167300--Sobic005G189100 Sobic001G143700--Sobic005G148000 Sobic001G143700--Sobic002G006200 Sobic001G143700--Sobic005G189100 Sobic001G143700--Sobic002G097300 Sobic005G040100 Sobic005G040100 Sobic001G143700--Sobic005G040100 Sobic001G143700--Sobic008G138400 Sobic001G143700--Sobic001G089300 Sobic001G143700--Sobic009G234900 Sobic001G143700--Sobic007G122600
Octagon: transcription factors


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