Gene annotation
Transcriptome id Sobic.008G020800.1
Synonym Sb08g001840
Functional annotation GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed
UniProt C5YQS2
Pfam PF02704
Panther DB PTHR23201 PTHR23201:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74670 : Gibberellin-regulated family protein
RAP-DB (Rice) LOC_Os09g24840.1 : GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed
MaizeGDB (Corn) Zm00025a043506 , Zm00025a053745
Brachypodium PNT64563 , PNT67130 , KQJ90233 , PNT76076
Barley HORVU1Hr1G057570.3 , HORVU1Hr1G057570.2 , HORVU5Hr1G065670.1 , HORVU5Hr1G065670.2 , HORVU7Hr1G042390.3 , HORVU7Hr1G042390.2 , HORVU7Hr1G042390.7 , HORVU7Hr1G042390.6 , HORVU7Hr1G042390.5 , HORVU7Hr1G042390.4
Wheat TraesCS7A02G208100 , TraesCS7D02G210500 , TraesCS5D02G234400 , TraesCS5A02G227000 , TraesCS5B02G225600 , TraesCS7B02G115300
Populus PNT56604 , PNT56603 , PNT29690


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G176700 methyltransferase, putative, expressed -
2 Sobic.001G167300 - -
3 Sobic.005G006100 hypothetical protein -
4 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
5 Sobic.006G070032 - K01193: INV, beta-fructofuranosidase
6 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
7 Sobic.002G194201 - -
8 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
9 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
10 Sobic.007G134501 - -
11 Sobic.005G040100 expressed protein -
12 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
13 Sobic.006G042600 - -
14 Sobic.003G007650 - -
15 Sobic.010G216100 leaf senescence related protein, putative, expressed -
16 Sobic.008G086500 - -
17 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
20 Sobic.005G148000 - -


Gene co-expression network
sample Sobic008G020800 Sobic008G020800 Sobic005G176700 Sobic005G176700 Sobic008G020800--Sobic005G176700 Sobic001G167300 Sobic001G167300 Sobic008G020800--Sobic001G167300 Sobic005G006100 Sobic005G006100 Sobic008G020800--Sobic005G006100 Sobic007G122600 Sobic007G122600 Sobic008G020800--Sobic007G122600 Sobic006G070032 Sobic006G070032 Sobic008G020800--Sobic006G070032 Sobic007G215200 Sobic007G215200 Sobic008G020800--Sobic007G215200 Sobic002G194201 Sobic002G194201 Sobic008G020800--Sobic002G194201 Sobic010G207800 Sobic010G207800 Sobic008G020800--Sobic010G207800 Sobic002G015900 Sobic002G015900 Sobic008G020800--Sobic002G015900 Sobic010G121700 Sobic010G121700 Sobic005G176700--Sobic010G121700 Sobic005G176700--Sobic008G020800 Sobic008G024200 Sobic008G024200 Sobic005G176700--Sobic008G024200 Sobic005G189100 Sobic005G189100 Sobic005G176700--Sobic005G189100 Sobic009G234900 Sobic009G234900 Sobic005G176700--Sobic009G234900 Sobic002G006200 Sobic002G006200 Sobic005G176700--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic005G176700--Sobic001G089300 Sobic005G176700--Sobic001G167300 Sobic001G143700 Sobic001G143700 Sobic005G176700--Sobic001G143700 Sobic003G004000 Sobic003G004000 Sobic001G167300--Sobic003G004000 Sobic001G167300--Sobic005G006100 Sobic001G167300--Sobic010G207800 Sobic001G167300--Sobic007G122600 Sobic001G167300--Sobic008G024200 Sobic004G192600 Sobic004G192600 Sobic001G167300--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic001G167300--Sobic001G089400 Sobic001G167300--Sobic009G234900 Sobic001G167300--Sobic005G189100 Sobic005G006100--Sobic007G122600 Sobic007G134501 Sobic007G134501 Sobic005G006100--Sobic007G134501 Sobic005G006100--Sobic002G194201 Sobic003G007650 Sobic003G007650 Sobic005G006100--Sobic003G007650 Sobic010G240300 Sobic010G240300 Sobic005G006100--Sobic010G240300 Sobic005G006400 Sobic005G006400 Sobic005G006100--Sobic005G006400 Sobic007G035200 Sobic007G035200 Sobic005G006100--Sobic007G035200 Sobic005G040100 Sobic005G040100 Sobic005G006100--Sobic005G040100 Sobic005G006100--Sobic010G207800 Sobic007G122600--Sobic005G006100 Sobic007G122600--Sobic002G194201 Sobic007G122600--Sobic007G134501 Sobic007G122600--Sobic005G040100 Sobic007G122600--Sobic003G007650 Sobic003G245300 Sobic003G245300 Sobic007G122600--Sobic003G245300 Sobic007G122600--Sobic005G006400 Sobic007G122600--Sobic010G240300 Sobic007G122600--Sobic007G035200 Sobic002G156400 Sobic002G156400 Sobic006G070032--Sobic002G156400 Sobic008G138400 Sobic008G138400 Sobic006G070032--Sobic008G138400 Sobic006G070032--Sobic008G020800 Sobic002G097300 Sobic002G097300 Sobic006G070032--Sobic002G097300 Sobic006G070032--Sobic005G189100 Sobic001G240700 Sobic001G240700 Sobic006G070032--Sobic001G240700 Sobic005G140900 Sobic005G140900 Sobic006G070032--Sobic005G140900 Sobic006G070032--Sobic001G089300 Sobic006G070032--Sobic002G006200 Sobic007G215200--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic007G215200--Sobic001G261416 Sobic001G332000 Sobic001G332000 Sobic007G215200--Sobic001G332000 Sobic010G090200 Sobic010G090200 Sobic007G215200--Sobic010G090200 Sobic001G329200 Sobic001G329200 Sobic007G215200--Sobic001G329200 Sobic001G287400 Sobic001G287400 Sobic007G215200--Sobic001G287400 Sobic007G014000 Sobic007G014000 Sobic007G215200--Sobic007G014000 Sobic001G171300 Sobic001G171300 Sobic007G215200--Sobic001G171300 Sobic010G216100 Sobic010G216100 Sobic007G215200--Sobic010G216100 Sobic002G194201--Sobic007G134501 Sobic002G194201--Sobic003G007650 Sobic002G194201--Sobic005G006400 Sobic002G194201--Sobic007G035200 Sobic002G194201--Sobic007G122600 Sobic002G194201--Sobic005G040100 Sobic008G086500 Sobic008G086500 Sobic002G194201--Sobic008G086500 Sobic002G194201--Sobic005G006100 Sobic002G194201--Sobic010G240300 Sobic010G207800--Sobic007G014000 Sobic010G207800--Sobic007G215200 Sobic010G207800--Sobic001G261416 Sobic010G207800--Sobic010G090200 Sobic010G207800--Sobic010G216100 Sobic010G207800--Sobic005G006100 Sobic010G207800--Sobic010G240300 Sobic010G207800--Sobic001G167300 Sobic010G207800--Sobic001G287400 Sobic009G250300 Sobic009G250300 Sobic002G015900--Sobic009G250300 Sobic001G337100 Sobic001G337100 Sobic002G015900--Sobic001G337100 Sobic001G063300 Sobic001G063300 Sobic002G015900--Sobic001G063300 Sobic002G015900--Sobic008G086500 Sobic002G015900--Sobic005G006400 Sobic002G015900--Sobic002G194201 Sobic002G015900--Sobic003G007650 Sobic002G015900--Sobic007G035200 Sobic002G015900--Sobic007G134501
Octagon: transcription factors


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