Gene annotation
Transcriptome id Sobic.006G070032.1
Synonym -
Functional annotation -
UniProt C6JS50
Pfam PF08244 PF00251
Panther DB PTHR31953 PTHR31953:SF11
NCBI CDD -
KEGG Orthology K01193; INV, beta-fructofuranosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52600 : cell wall invertase 2
RAP-DB (Rice) LOC_Os04g33720.1 : glycosyl hydrolases, putative, expressed
MaizeGDB (Corn) Zm00025a020547 , Zm00025a056002 , Zm00025a009410 , Zm00025a025860
Brachypodium KQJ82525 , KQJ99740 , KQJ99739
Barley HORVU3Hr1G005350.4 , HORVU3Hr1G005350.2 , HORVU3Hr1G005350.3 , HORVU2Hr1G073210.9 , HORVU2Hr1G073210.8 , HORVU2Hr1G073210.7 , HORVU2Hr1G073210.6 , HORVU2Hr1G073210.2 , HORVU2Hr1G073210.1 , HORVU4Hr1G086300.9 , HORVU4Hr1G086300.7 , HORVU4Hr1G086300.5 , HORVU4Hr1G086300.4 , HORVU4Hr1G086300.3 , HORVU4Hr1G086300.2 , HORVU4Hr1G086300.1 , HORVU4Hr1G086300.8 , HORVU6Hr1G012550.5 , HORVU6Hr1G012550.7 , HORVU6Hr1G012550.6 , HORVU6Hr1G012550.3 , HORVU6Hr1G012550.9 , HORVU6Hr1G012550.11 , HORVU6Hr1G012550.10 , HORVU6Hr1G012550.12 , HORVU4Hr1G086300.10 , HORVU4Hr1G011000.1 , HORVU6Hr1G012550.8 , HORVU2Hr1G073210.5 , HORVU2Hr1G073210.4 , HORVU2Hr1G073210.3 , HORVU5Hr1G123930.2
Wheat TraesCS4A02G321700 , TraesCSU02G173900 , TraesCS5D02G552900 , TraesCS3A02G029700 , TraesCSU02G175300 , TraesCS5B02G556600 , TraesCS6D02G066800 , TraesCS3D02G015900 , TraesCS3B02G028500 , TraesCS4B02G356800 , TraesCS2A02G295400 , TraesCS6A02G069000 , TraesCS3B02G028100 , TraesCS4D02G350500 , TraesCS5A02G526200 , TraesCSU02G216800 , TraesCS3A02G029600 , TraesCS2A02G489000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
2 Sobic.008G138400 expressed protein -
3 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
4 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
5 Sobic.005G189100 transcription factor Dp, putative, expressed -
6 Sobic.001G240700 - -
7 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
8 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
9 Sobic.002G006200 - -
10 Sobic.009G234900 WRKY43, expressed -
11 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.001G143700 cupin domain containing protein, expressed -
13 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
14 Sobic.009G047100 GEX1, putative, expressed -
15 Sobic.005G148000 - -
16 Sobic.008G036100 expressed protein -
17 Sobic.001G167300 - -
18 Sobic.005G156300 - -
19 Sobic.005G040100 expressed protein -
20 Sobic.004G052600 - -


Gene co-expression network
sample Sobic006G070032 Sobic006G070032 Sobic002G156400 Sobic002G156400 Sobic006G070032--Sobic002G156400 Sobic008G138400 Sobic008G138400 Sobic006G070032--Sobic008G138400 Sobic008G020800 Sobic008G020800 Sobic006G070032--Sobic008G020800 Sobic002G097300 Sobic002G097300 Sobic006G070032--Sobic002G097300 Sobic005G189100 Sobic005G189100 Sobic006G070032--Sobic005G189100 Sobic001G240700 Sobic001G240700 Sobic006G070032--Sobic001G240700 Sobic005G140900 Sobic005G140900 Sobic006G070032--Sobic005G140900 Sobic001G089300 Sobic001G089300 Sobic006G070032--Sobic001G089300 Sobic002G006200 Sobic002G006200 Sobic006G070032--Sobic002G006200 Sobic002G156400--Sobic008G138400 Sobic002G156400--Sobic005G140900 Sobic002G156400--Sobic002G097300 Sobic002G156400--Sobic005G189100 Sobic002G156400--Sobic001G089300 Sobic009G234900 Sobic009G234900 Sobic002G156400--Sobic009G234900 Sobic002G156400--Sobic002G006200 Sobic010G121700 Sobic010G121700 Sobic002G156400--Sobic010G121700 Sobic008G036100 Sobic008G036100 Sobic002G156400--Sobic008G036100 Sobic008G138400--Sobic002G097300 Sobic008G138400--Sobic002G156400 Sobic008G138400--Sobic005G140900 Sobic008G138400--Sobic005G189100 Sobic008G138400--Sobic002G006200 Sobic008G138400--Sobic001G089300 Sobic001G143700 Sobic001G143700 Sobic008G138400--Sobic001G143700 Sobic008G138400--Sobic009G234900 Sobic005G148000 Sobic005G148000 Sobic008G138400--Sobic005G148000 Sobic005G176700 Sobic005G176700 Sobic008G020800--Sobic005G176700 Sobic001G167300 Sobic001G167300 Sobic008G020800--Sobic001G167300 Sobic005G006100 Sobic005G006100 Sobic008G020800--Sobic005G006100 Sobic007G122600 Sobic007G122600 Sobic008G020800--Sobic007G122600 Sobic008G020800--Sobic006G070032 Sobic007G215200 Sobic007G215200 Sobic008G020800--Sobic007G215200 Sobic002G194201 Sobic002G194201 Sobic008G020800--Sobic002G194201 Sobic010G207800 Sobic010G207800 Sobic008G020800--Sobic010G207800 Sobic002G015900 Sobic002G015900 Sobic008G020800--Sobic002G015900 Sobic002G097300--Sobic008G138400 Sobic002G097300--Sobic002G006200 Sobic002G097300--Sobic001G143700 Sobic002G097300--Sobic005G140900 Sobic002G097300--Sobic005G189100 Sobic002G097300--Sobic002G156400 Sobic002G097300--Sobic005G148000 Sobic002G097300--Sobic001G089300 Sobic002G097300--Sobic008G036100 Sobic005G189100--Sobic002G006200 Sobic005G189100--Sobic001G089300 Sobic005G189100--Sobic009G234900 Sobic005G189100--Sobic008G138400 Sobic005G189100--Sobic001G143700 Sobic005G189100--Sobic002G097300 Sobic005G189100--Sobic010G121700 Sobic008G024200 Sobic008G024200 Sobic005G189100--Sobic008G024200 Sobic005G189100--Sobic002G156400 Sobic001G240700--Sobic001G167300 Sobic001G240700--Sobic009G234900 Sobic001G240700--Sobic006G070032 Sobic001G240700--Sobic010G121700 Sobic001G240700--Sobic008G024200 Sobic003G004000 Sobic003G004000 Sobic001G240700--Sobic003G004000 Sobic001G240700--Sobic005G189100 Sobic001G240700--Sobic001G089300 Sobic009G047100 Sobic009G047100 Sobic001G240700--Sobic009G047100 Sobic005G140900--Sobic008G138400 Sobic005G140900--Sobic002G156400 Sobic005G140900--Sobic002G097300 Sobic005G140900--Sobic008G036100 Sobic005G140900--Sobic005G189100 Sobic005G140900--Sobic002G006200 Sobic005G140900--Sobic001G089300 Sobic005G140900--Sobic001G143700 Sobic005G140900--Sobic009G234900 Sobic001G089300--Sobic005G189100 Sobic001G089300--Sobic009G234900 Sobic001G089300--Sobic002G006200 Sobic001G089300--Sobic008G138400 Sobic001G089300--Sobic010G121700 Sobic001G089300--Sobic002G097300 Sobic001G089300--Sobic002G156400 Sobic001G089300--Sobic008G024200 Sobic001G089300--Sobic001G143700 Sobic002G006200--Sobic005G189100 Sobic002G006200--Sobic001G143700 Sobic002G006200--Sobic002G097300 Sobic002G006200--Sobic008G138400 Sobic002G006200--Sobic001G089300 Sobic002G006200--Sobic005G148000 Sobic002G006200--Sobic009G234900 Sobic002G006200--Sobic008G024200 Sobic002G006200--Sobic009G047100
Octagon: transcription factors


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