Gene annotation
Transcriptome id Sobic.001G240700.1
Synonym
Functional annotation -
UniProt A0A1B6QKM8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G167300 - -
2 Sobic.009G234900 WRKY43, expressed -
3 Sobic.006G070032 - K01193: INV, beta-fructofuranosidase
4 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
6 Sobic.003G004000 - -
7 Sobic.005G189100 transcription factor Dp, putative, expressed -
8 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
9 Sobic.009G047100 GEX1, putative, expressed -
10 Sobic.002G006200 - -
11 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
12 Sobic.001G143700 cupin domain containing protein, expressed -
13 Sobic.001G089400 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
14 Sobic.005G006100 hypothetical protein -
15 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
16 Sobic.005G148000 - -
17 Sobic.004G192600 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.008G138400 expressed protein -
19 Sobic.005G040100 expressed protein -
20 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic001G240700 Sobic001G240700 Sobic001G167300 Sobic001G167300 Sobic001G240700--Sobic001G167300 Sobic009G234900 Sobic009G234900 Sobic001G240700--Sobic009G234900 Sobic006G070032 Sobic006G070032 Sobic001G240700--Sobic006G070032 Sobic010G121700 Sobic010G121700 Sobic001G240700--Sobic010G121700 Sobic008G024200 Sobic008G024200 Sobic001G240700--Sobic008G024200 Sobic003G004000 Sobic003G004000 Sobic001G240700--Sobic003G004000 Sobic005G189100 Sobic005G189100 Sobic001G240700--Sobic005G189100 Sobic001G089300 Sobic001G089300 Sobic001G240700--Sobic001G089300 Sobic009G047100 Sobic009G047100 Sobic001G240700--Sobic009G047100 Sobic001G167300--Sobic003G004000 Sobic005G006100 Sobic005G006100 Sobic001G167300--Sobic005G006100 Sobic010G207800 Sobic010G207800 Sobic001G167300--Sobic010G207800 Sobic007G122600 Sobic007G122600 Sobic001G167300--Sobic007G122600 Sobic001G167300--Sobic008G024200 Sobic004G192600 Sobic004G192600 Sobic001G167300--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic001G167300--Sobic001G089400 Sobic001G167300--Sobic009G234900 Sobic001G167300--Sobic005G189100 Sobic009G234900--Sobic005G189100 Sobic009G234900--Sobic010G121700 Sobic009G234900--Sobic001G089300 Sobic009G234900--Sobic008G024200 Sobic002G006200 Sobic002G006200 Sobic009G234900--Sobic002G006200 Sobic009G234900--Sobic009G047100 Sobic008G138400 Sobic008G138400 Sobic009G234900--Sobic008G138400 Sobic002G156400 Sobic002G156400 Sobic009G234900--Sobic002G156400 Sobic001G143700 Sobic001G143700 Sobic009G234900--Sobic001G143700 Sobic006G070032--Sobic002G156400 Sobic006G070032--Sobic008G138400 Sobic008G020800 Sobic008G020800 Sobic006G070032--Sobic008G020800 Sobic002G097300 Sobic002G097300 Sobic006G070032--Sobic002G097300 Sobic006G070032--Sobic005G189100 Sobic006G070032--Sobic001G240700 Sobic005G140900 Sobic005G140900 Sobic006G070032--Sobic005G140900 Sobic006G070032--Sobic001G089300 Sobic006G070032--Sobic002G006200 Sobic010G121700--Sobic009G234900 Sobic010G121700--Sobic005G189100 Sobic010G121700--Sobic008G024200 Sobic010G121700--Sobic001G089300 Sobic010G121700--Sobic009G047100 Sobic010G121700--Sobic002G006200 Sobic010G121700--Sobic002G156400 Sobic010G121700--Sobic008G138400 Sobic010G121700--Sobic002G097300 Sobic008G024200--Sobic009G047100 Sobic008G024200--Sobic009G234900 Sobic008G024200--Sobic010G121700 Sobic008G024200--Sobic005G189100 Sobic008G024200--Sobic002G006200 Sobic008G024200--Sobic001G089300 Sobic008G024200--Sobic001G143700 Sobic008G024200--Sobic001G167300 Sobic008G024200--Sobic008G138400 Sobic003G004000--Sobic001G167300 Sobic003G004000--Sobic004G192600 Sobic003G004000--Sobic001G089400 Sobic008G043200 Sobic008G043200 Sobic003G004000--Sobic008G043200 Sobic003G004000--Sobic008G024200 Sobic003G004000--Sobic010G207800 Sobic003G004000--Sobic010G121700 Sobic003G004000--Sobic005G006100 Sobic003G004000--Sobic009G234900 Sobic005G189100--Sobic002G006200 Sobic005G189100--Sobic001G089300 Sobic005G189100--Sobic009G234900 Sobic005G189100--Sobic008G138400 Sobic005G189100--Sobic001G143700 Sobic005G189100--Sobic002G097300 Sobic005G189100--Sobic010G121700 Sobic005G189100--Sobic008G024200 Sobic005G189100--Sobic002G156400 Sobic001G089300--Sobic005G189100 Sobic001G089300--Sobic009G234900 Sobic001G089300--Sobic002G006200 Sobic001G089300--Sobic008G138400 Sobic001G089300--Sobic010G121700 Sobic001G089300--Sobic002G097300 Sobic001G089300--Sobic002G156400 Sobic001G089300--Sobic008G024200 Sobic001G089300--Sobic001G143700 Sobic009G047100--Sobic008G024200 Sobic009G047100--Sobic002G006200 Sobic009G047100--Sobic009G234900 Sobic009G047100--Sobic005G189100 Sobic009G047100--Sobic001G089300 Sobic009G047100--Sobic010G121700 Sobic009G047100--Sobic008G138400 Sobic009G047100--Sobic002G097300 Sobic009G047100--Sobic001G143700
Octagon: transcription factors


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