Gene annotation
Transcriptome id Sobic.007G070900.2
Synonym Sb07g005600
Functional annotation OsFBL43 - F-box domain and LRR containing protein, expressed
UniProt A0A1Z5R8H1
Pfam -
Panther DB PTHR24006
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03630 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g09640.1 : OsFBL43 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ95509 , KQJ95482 , PNT66828 , KQK07021
Barley -
Wheat TraesCS7D02G203500 , TraesCS7B02G205200 , TraesCS7A02G304900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G106600 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.005G049850 - -
3 Sobic.001G337100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
4 Sobic.004G168200 ATPase, AAA family protein, expressed -
5 Sobic.001G357400 emp24/gp25L/p24 family protein, putative, expressed -
6 Sobic.001G143700 cupin domain containing protein, expressed -
7 Sobic.005G148000 - -
8 Sobic.002G006200 - -
9 Sobic.005G189100 transcription factor Dp, putative, expressed -
10 Sobic.005G040100 expressed protein -
11 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.009G234900 WRKY43, expressed -
13 Sobic.008G138400 expressed protein -
14 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
16 Sobic.005G003700 - -
17 Sobic.007G134501 - -
18 Sobic.005G006100 hypothetical protein -
19 Sobic.002G194201 - -
20 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic007G070900 Sobic007G070900 Sobic002G106600 Sobic002G106600 Sobic007G070900--Sobic002G106600 Sobic005G049850 Sobic005G049850 Sobic007G070900--Sobic005G049850 Sobic001G337100 Sobic001G337100 Sobic007G070900--Sobic001G337100 Sobic004G168200 Sobic004G168200 Sobic007G070900--Sobic004G168200 Sobic001G357400 Sobic001G357400 Sobic007G070900--Sobic001G357400 Sobic001G143700 Sobic001G143700 Sobic007G070900--Sobic001G143700 Sobic005G148000 Sobic005G148000 Sobic007G070900--Sobic005G148000 Sobic002G006200 Sobic002G006200 Sobic007G070900--Sobic002G006200 Sobic005G189100 Sobic005G189100 Sobic007G070900--Sobic005G189100 Sobic002G106600--Sobic001G337100 Sobic008G086500 Sobic008G086500 Sobic002G106600--Sobic008G086500 Sobic002G106600--Sobic007G070900 Sobic002G194201 Sobic002G194201 Sobic002G106600--Sobic002G194201 Sobic006G042600 Sobic006G042600 Sobic002G106600--Sobic006G042600 Sobic010G216100 Sobic010G216100 Sobic002G106600--Sobic010G216100 Sobic005G006400 Sobic005G006400 Sobic002G106600--Sobic005G006400 Sobic010G240300 Sobic010G240300 Sobic002G106600--Sobic010G240300 Sobic004G308800 Sobic004G308800 Sobic002G106600--Sobic004G308800 Sobic008G138400 Sobic008G138400 Sobic005G049850--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic005G049850--Sobic002G097300 Sobic005G140900 Sobic005G140900 Sobic005G049850--Sobic005G140900 Sobic002G156400 Sobic002G156400 Sobic005G049850--Sobic002G156400 Sobic005G049850--Sobic002G006200 Sobic005G049850--Sobic005G189100 Sobic005G049850--Sobic001G143700 Sobic005G049850--Sobic005G148000 Sobic001G089300 Sobic001G089300 Sobic005G049850--Sobic001G089300 Sobic002G015900 Sobic002G015900 Sobic001G337100--Sobic002G015900 Sobic001G337100--Sobic008G086500 Sobic009G250300 Sobic009G250300 Sobic001G337100--Sobic009G250300 Sobic001G337100--Sobic002G194201 Sobic001G337100--Sobic005G006400 Sobic003G007650 Sobic003G007650 Sobic001G337100--Sobic003G007650 Sobic007G035200 Sobic007G035200 Sobic001G337100--Sobic007G035200 Sobic007G134501 Sobic007G134501 Sobic001G337100--Sobic007G134501 Sobic001G337100--Sobic010G216100 Sobic001G211700 Sobic001G211700 Sobic004G168200--Sobic001G211700 Sobic006G017700 Sobic006G017700 Sobic004G168200--Sobic006G017700 Sobic006G017900 Sobic006G017900 Sobic004G168200--Sobic006G017900 Sobic002G182701 Sobic002G182701 Sobic004G168200--Sobic002G182701 Sobic002G384900 Sobic002G384900 Sobic004G168200--Sobic002G384900 Sobic004G168200--Sobic005G049850 Sobic005G000900 Sobic005G000900 Sobic004G168200--Sobic005G000900 Sobic007G082100 Sobic007G082100 Sobic004G168200--Sobic007G082100 Sobic007G031200 Sobic007G031200 Sobic004G168200--Sobic007G031200 Sobic006G070032 Sobic006G070032 Sobic001G357400--Sobic006G070032 Sobic001G357400--Sobic002G106600 Sobic001G357400--Sobic007G070900 Sobic001G357400--Sobic001G337100 Sobic001G357400--Sobic002G097300 Sobic001G357400--Sobic001G143700 Sobic001G357400--Sobic005G148000 Sobic008G036100 Sobic008G036100 Sobic001G357400--Sobic008G036100 Sobic001G357400--Sobic008G138400 Sobic001G143700--Sobic005G148000 Sobic001G143700--Sobic002G006200 Sobic001G143700--Sobic005G189100 Sobic001G143700--Sobic002G097300 Sobic005G040100 Sobic005G040100 Sobic001G143700--Sobic005G040100 Sobic001G143700--Sobic008G138400 Sobic001G143700--Sobic001G089300 Sobic009G234900 Sobic009G234900 Sobic001G143700--Sobic009G234900 Sobic007G122600 Sobic007G122600 Sobic001G143700--Sobic007G122600 Sobic005G148000--Sobic001G143700 Sobic005G148000--Sobic005G040100 Sobic005G148000--Sobic002G006200 Sobic005G148000--Sobic002G097300 Sobic005G148000--Sobic005G189100 Sobic005G148000--Sobic007G134501 Sobic005G148000--Sobic007G122600 Sobic005G148000--Sobic008G138400 Sobic005G148000--Sobic002G194201 Sobic002G006200--Sobic005G189100 Sobic002G006200--Sobic001G143700 Sobic002G006200--Sobic002G097300 Sobic002G006200--Sobic008G138400 Sobic002G006200--Sobic001G089300 Sobic002G006200--Sobic005G148000 Sobic002G006200--Sobic009G234900 Sobic008G024200 Sobic008G024200 Sobic002G006200--Sobic008G024200 Sobic009G047100 Sobic009G047100 Sobic002G006200--Sobic009G047100 Sobic005G189100--Sobic002G006200 Sobic005G189100--Sobic001G089300 Sobic005G189100--Sobic009G234900 Sobic005G189100--Sobic008G138400 Sobic005G189100--Sobic001G143700 Sobic005G189100--Sobic002G097300 Sobic010G121700 Sobic010G121700 Sobic005G189100--Sobic010G121700 Sobic005G189100--Sobic008G024200 Sobic005G189100--Sobic002G156400
Octagon: transcription factors


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