Gene annotation
Transcriptome id Sobic.001G337100.1,Sobic.001G337100.2
Synonym TIM17-2, Sb01g032490, TIM17, ATTIM17-2
Functional annotation mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt C5WWK5
Pfam PF02466
Panther DB PTHR10485 PTHR10485:SF0
NCBI CDD KOG1652; Mitochondrial import inner membrane translocase, subunit TIM17
KEGG Orthology K17795; mitochondrial import inner membrane translocase subunit TIM17
Gene Ontology GO:0015450; P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO:0006886intracellular protein transport GO:0005744TIM23 mitochondrial import inner membrane translocase complex


Orthologs (automatic annotation)
TAIR AT2G37410 : translocase inner membrane subunit 17-2
RAP-DB (Rice) LOC_Os07g41330.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) Zm00025a015170
Brachypodium KQK15341
Barley HORVU2Hr1G033040.2 , HORVU2Hr1G033040.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.008G086500 - -
3 Sobic.009G250300 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.002G194201 - -
5 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
6 Sobic.003G007650 - -
7 Sobic.007G035200 - -
8 Sobic.007G134501 - -
9 Sobic.010G216100 leaf senescence related protein, putative, expressed -
10 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
11 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.005G006100 hypothetical protein -
13 Sobic.006G042600 - -
14 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
15 Sobic.005G040100 expressed protein -
16 Sobic.002G194300 expressed protein -
17 Sobic.003G245300 3-5 exonuclease domain-containing protein, putative, expressed -
18 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.002G106600 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
20 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -


Gene co-expression network
sample Sobic001G337100 Sobic001G337100 Sobic002G015900 Sobic002G015900 Sobic001G337100--Sobic002G015900 Sobic008G086500 Sobic008G086500 Sobic001G337100--Sobic008G086500 Sobic009G250300 Sobic009G250300 Sobic001G337100--Sobic009G250300 Sobic002G194201 Sobic002G194201 Sobic001G337100--Sobic002G194201 Sobic005G006400 Sobic005G006400 Sobic001G337100--Sobic005G006400 Sobic003G007650 Sobic003G007650 Sobic001G337100--Sobic003G007650 Sobic007G035200 Sobic007G035200 Sobic001G337100--Sobic007G035200 Sobic007G134501 Sobic007G134501 Sobic001G337100--Sobic007G134501 Sobic010G216100 Sobic010G216100 Sobic001G337100--Sobic010G216100 Sobic002G015900--Sobic009G250300 Sobic002G015900--Sobic001G337100 Sobic001G063300 Sobic001G063300 Sobic002G015900--Sobic001G063300 Sobic002G015900--Sobic008G086500 Sobic002G015900--Sobic005G006400 Sobic002G015900--Sobic002G194201 Sobic002G015900--Sobic003G007650 Sobic002G015900--Sobic007G035200 Sobic002G015900--Sobic007G134501 Sobic008G086500--Sobic005G006400 Sobic010G240300 Sobic010G240300 Sobic008G086500--Sobic010G240300 Sobic008G086500--Sobic007G035200 Sobic008G086500--Sobic003G007650 Sobic008G086500--Sobic002G194201 Sobic008G086500--Sobic010G216100 Sobic007G014000 Sobic007G014000 Sobic008G086500--Sobic007G014000 Sobic002G194300 Sobic002G194300 Sobic008G086500--Sobic002G194300 Sobic008G086500--Sobic007G134501 Sobic009G250300--Sobic002G015900 Sobic009G250300--Sobic001G337100 Sobic004G054900 Sobic004G054900 Sobic009G250300--Sobic004G054900 Sobic009G250300--Sobic007G134501 Sobic009G250300--Sobic002G194201 Sobic007G122600 Sobic007G122600 Sobic009G250300--Sobic007G122600 Sobic005G006100 Sobic005G006100 Sobic009G250300--Sobic005G006100 Sobic005G040100 Sobic005G040100 Sobic009G250300--Sobic005G040100 Sobic009G250300--Sobic003G007650 Sobic002G194201--Sobic007G134501 Sobic002G194201--Sobic003G007650 Sobic002G194201--Sobic005G006400 Sobic002G194201--Sobic007G035200 Sobic002G194201--Sobic007G122600 Sobic002G194201--Sobic005G040100 Sobic002G194201--Sobic008G086500 Sobic002G194201--Sobic005G006100 Sobic002G194201--Sobic010G240300 Sobic005G006400--Sobic007G035200 Sobic005G006400--Sobic003G007650 Sobic005G006400--Sobic010G240300 Sobic005G006400--Sobic008G086500 Sobic005G006400--Sobic002G194201 Sobic005G006400--Sobic007G134501 Sobic005G006400--Sobic005G006100 Sobic005G006400--Sobic007G014000 Sobic005G006400--Sobic010G216100 Sobic003G007650--Sobic007G035200 Sobic003G007650--Sobic007G134501 Sobic003G007650--Sobic005G006400 Sobic003G007650--Sobic002G194201 Sobic003G007650--Sobic008G086500 Sobic003G007650--Sobic010G240300 Sobic003G007650--Sobic005G006100 Sobic003G007650--Sobic005G040100 Sobic003G007650--Sobic007G122600 Sobic007G035200--Sobic005G006400 Sobic007G035200--Sobic003G007650 Sobic007G035200--Sobic008G086500 Sobic007G035200--Sobic010G240300 Sobic007G035200--Sobic007G134501 Sobic007G035200--Sobic002G194201 Sobic007G035200--Sobic005G006100 Sobic007G035200--Sobic007G014000 Sobic007G035200--Sobic010G216100 Sobic007G134501--Sobic003G007650 Sobic007G134501--Sobic002G194201 Sobic007G134501--Sobic005G040100 Sobic007G134501--Sobic007G035200 Sobic007G134501--Sobic005G006400 Sobic007G134501--Sobic007G122600 Sobic007G134501--Sobic005G006100 Sobic007G134501--Sobic008G086500 Sobic007G134501--Sobic010G240300 Sobic010G216100--Sobic007G014000 Sobic010G216100--Sobic010G240300 Sobic010G090200 Sobic010G090200 Sobic010G216100--Sobic010G090200 Sobic001G261416 Sobic001G261416 Sobic010G216100--Sobic001G261416 Sobic010G216100--Sobic008G086500 Sobic010G216100--Sobic005G006400 Sobic010G216100--Sobic002G194300 Sobic010G215000 Sobic010G215000 Sobic010G216100--Sobic010G215000 Sobic010G207800 Sobic010G207800 Sobic010G216100--Sobic010G207800
Octagon: transcription factors


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