Gene annotation
Transcriptome id Sobic.001G357400.1
Synonym Sb01g034140
Functional annotation emp24/gp25L/p24 family protein, putative, expressed
UniProt C5WYM6
Pfam PF01105
Panther DB PTHR22811 PTHR22811:SF71
NCBI CDD KOG1691; emp24/gp25L/p24 family of membrane trafficking proteins
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT1G26690 : emp24/gp25L/p24 family/GOLD family protein
RAP-DB (Rice) LOC_Os03g25930.1 : emp24/gp25L/p24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a052048
Brachypodium PNT77331 , KQK15064
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G070032 - K01193: INV, beta-fructofuranosidase
2 Sobic.002G106600 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.007G070900 OsFBL43 - F-box domain and LRR containing protein, expressed -
4 Sobic.001G337100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
5 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
6 Sobic.001G143700 cupin domain containing protein, expressed -
7 Sobic.005G148000 - -
8 Sobic.008G036100 expressed protein -
9 Sobic.008G138400 expressed protein -
10 Sobic.002G006200 - -
11 Sobic.005G049850 - -
12 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
13 Sobic.005G040100 expressed protein -
14 Sobic.001G192300 expressed protein -
15 Sobic.005G189100 transcription factor Dp, putative, expressed -
16 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.009G182100 cysteine proteinase inhibitor precursor protein, putative, expressed -
18 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
19 Sobic.006G042600 - -
20 Sobic.009G110600 OsFBX422 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G357400 Sobic001G357400 Sobic006G070032 Sobic006G070032 Sobic001G357400--Sobic006G070032 Sobic002G106600 Sobic002G106600 Sobic001G357400--Sobic002G106600 Sobic007G070900 Sobic007G070900 Sobic001G357400--Sobic007G070900 Sobic001G337100 Sobic001G337100 Sobic001G357400--Sobic001G337100 Sobic002G097300 Sobic002G097300 Sobic001G357400--Sobic002G097300 Sobic001G143700 Sobic001G143700 Sobic001G357400--Sobic001G143700 Sobic005G148000 Sobic005G148000 Sobic001G357400--Sobic005G148000 Sobic008G036100 Sobic008G036100 Sobic001G357400--Sobic008G036100 Sobic008G138400 Sobic008G138400 Sobic001G357400--Sobic008G138400 Sobic002G156400 Sobic002G156400 Sobic006G070032--Sobic002G156400 Sobic006G070032--Sobic008G138400 Sobic008G020800 Sobic008G020800 Sobic006G070032--Sobic008G020800 Sobic006G070032--Sobic002G097300 Sobic005G189100 Sobic005G189100 Sobic006G070032--Sobic005G189100 Sobic001G240700 Sobic001G240700 Sobic006G070032--Sobic001G240700 Sobic005G140900 Sobic005G140900 Sobic006G070032--Sobic005G140900 Sobic001G089300 Sobic001G089300 Sobic006G070032--Sobic001G089300 Sobic002G006200 Sobic002G006200 Sobic006G070032--Sobic002G006200 Sobic002G106600--Sobic001G337100 Sobic008G086500 Sobic008G086500 Sobic002G106600--Sobic008G086500 Sobic002G106600--Sobic007G070900 Sobic002G194201 Sobic002G194201 Sobic002G106600--Sobic002G194201 Sobic006G042600 Sobic006G042600 Sobic002G106600--Sobic006G042600 Sobic010G216100 Sobic010G216100 Sobic002G106600--Sobic010G216100 Sobic005G006400 Sobic005G006400 Sobic002G106600--Sobic005G006400 Sobic010G240300 Sobic010G240300 Sobic002G106600--Sobic010G240300 Sobic004G308800 Sobic004G308800 Sobic002G106600--Sobic004G308800 Sobic007G070900--Sobic002G106600 Sobic005G049850 Sobic005G049850 Sobic007G070900--Sobic005G049850 Sobic007G070900--Sobic001G337100 Sobic004G168200 Sobic004G168200 Sobic007G070900--Sobic004G168200 Sobic007G070900--Sobic001G357400 Sobic007G070900--Sobic001G143700 Sobic007G070900--Sobic005G148000 Sobic007G070900--Sobic002G006200 Sobic007G070900--Sobic005G189100 Sobic002G015900 Sobic002G015900 Sobic001G337100--Sobic002G015900 Sobic001G337100--Sobic008G086500 Sobic009G250300 Sobic009G250300 Sobic001G337100--Sobic009G250300 Sobic001G337100--Sobic002G194201 Sobic001G337100--Sobic005G006400 Sobic003G007650 Sobic003G007650 Sobic001G337100--Sobic003G007650 Sobic007G035200 Sobic007G035200 Sobic001G337100--Sobic007G035200 Sobic007G134501 Sobic007G134501 Sobic001G337100--Sobic007G134501 Sobic001G337100--Sobic010G216100 Sobic002G097300--Sobic008G138400 Sobic002G097300--Sobic002G006200 Sobic002G097300--Sobic001G143700 Sobic002G097300--Sobic005G140900 Sobic002G097300--Sobic005G189100 Sobic002G097300--Sobic002G156400 Sobic002G097300--Sobic005G148000 Sobic002G097300--Sobic001G089300 Sobic002G097300--Sobic008G036100 Sobic001G143700--Sobic005G148000 Sobic001G143700--Sobic002G006200 Sobic001G143700--Sobic005G189100 Sobic001G143700--Sobic002G097300 Sobic005G040100 Sobic005G040100 Sobic001G143700--Sobic005G040100 Sobic001G143700--Sobic008G138400 Sobic001G143700--Sobic001G089300 Sobic009G234900 Sobic009G234900 Sobic001G143700--Sobic009G234900 Sobic007G122600 Sobic007G122600 Sobic001G143700--Sobic007G122600 Sobic005G148000--Sobic001G143700 Sobic005G148000--Sobic005G040100 Sobic005G148000--Sobic002G006200 Sobic005G148000--Sobic002G097300 Sobic005G148000--Sobic005G189100 Sobic005G148000--Sobic007G134501 Sobic005G148000--Sobic007G122600 Sobic005G148000--Sobic008G138400 Sobic005G148000--Sobic002G194201 Sobic008G036100--Sobic005G140900 Sobic008G036100--Sobic008G138400 Sobic008G036100--Sobic002G097300 Sobic008G036100--Sobic002G156400 Sobic008G036100--Sobic002G006200 Sobic008G036100--Sobic001G143700 Sobic008G036100--Sobic005G189100 Sobic008G036100--Sobic005G148000 Sobic008G036100--Sobic001G089300 Sobic008G138400--Sobic002G097300 Sobic008G138400--Sobic002G156400 Sobic008G138400--Sobic005G140900 Sobic008G138400--Sobic005G189100 Sobic008G138400--Sobic002G006200 Sobic008G138400--Sobic001G089300 Sobic008G138400--Sobic001G143700 Sobic008G138400--Sobic009G234900 Sobic008G138400--Sobic005G148000
Octagon: transcription factors


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