Gene annotation
Transcriptome id Sobic.009G110600.1
Synonym Sb09g017900
Functional annotation OsFBX422 - F-box domain containing protein, expressed
UniProt C5YWT1
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF139
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G26340 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os11g42240.1 : OsFBX431 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G182100 cysteine proteinase inhibitor precursor protein, putative, expressed -
2 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.008G138400 expressed protein -
5 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
6 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
7 Sobic.005G189100 transcription factor Dp, putative, expressed -
8 Sobic.009G234900 WRKY43, expressed -
9 Sobic.009G047100 GEX1, putative, expressed -
10 Sobic.005G000900 OsFBX103 - F-box domain containing protein, expressed -
11 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
12 Sobic.002G006200 - -
13 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
14 Sobic.002G182701 - -
15 Sobic.008G036100 expressed protein -
16 Sobic.006G017700 expressed protein -
17 Sobic.001G143700 cupin domain containing protein, expressed -
18 Sobic.005G148000 - -
19 Sobic.001G192300 expressed protein -
20 Sobic.004G050900 OsFBX248 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic009G110600 Sobic009G110600 Sobic009G182100 Sobic009G182100 Sobic009G110600--Sobic009G182100 Sobic002G156400 Sobic002G156400 Sobic009G110600--Sobic002G156400 Sobic010G121700 Sobic010G121700 Sobic009G110600--Sobic010G121700 Sobic008G138400 Sobic008G138400 Sobic009G110600--Sobic008G138400 Sobic001G089300 Sobic001G089300 Sobic009G110600--Sobic001G089300 Sobic005G140900 Sobic005G140900 Sobic009G110600--Sobic005G140900 Sobic005G189100 Sobic005G189100 Sobic009G110600--Sobic005G189100 Sobic009G234900 Sobic009G234900 Sobic009G110600--Sobic009G234900 Sobic009G047100 Sobic009G047100 Sobic009G110600--Sobic009G047100 Sobic002G182701 Sobic002G182701 Sobic009G182100--Sobic002G182701 Sobic006G017700 Sobic006G017700 Sobic009G182100--Sobic006G017700 Sobic005G000900 Sobic005G000900 Sobic009G182100--Sobic005G000900 Sobic006G017900 Sobic006G017900 Sobic009G182100--Sobic006G017900 Sobic009G182100--Sobic002G156400 Sobic001G211700 Sobic001G211700 Sobic009G182100--Sobic001G211700 Sobic009G182100--Sobic005G140900 Sobic002G384900 Sobic002G384900 Sobic009G182100--Sobic002G384900 Sobic009G182100--Sobic008G138400 Sobic002G156400--Sobic008G138400 Sobic002G156400--Sobic005G140900 Sobic002G097300 Sobic002G097300 Sobic002G156400--Sobic002G097300 Sobic002G156400--Sobic005G189100 Sobic002G156400--Sobic001G089300 Sobic002G156400--Sobic009G234900 Sobic002G006200 Sobic002G006200 Sobic002G156400--Sobic002G006200 Sobic002G156400--Sobic010G121700 Sobic008G036100 Sobic008G036100 Sobic002G156400--Sobic008G036100 Sobic010G121700--Sobic009G234900 Sobic010G121700--Sobic005G189100 Sobic008G024200 Sobic008G024200 Sobic010G121700--Sobic008G024200 Sobic010G121700--Sobic001G089300 Sobic010G121700--Sobic009G047100 Sobic010G121700--Sobic002G006200 Sobic010G121700--Sobic002G156400 Sobic010G121700--Sobic008G138400 Sobic010G121700--Sobic002G097300 Sobic008G138400--Sobic002G097300 Sobic008G138400--Sobic002G156400 Sobic008G138400--Sobic005G140900 Sobic008G138400--Sobic005G189100 Sobic008G138400--Sobic002G006200 Sobic008G138400--Sobic001G089300 Sobic001G143700 Sobic001G143700 Sobic008G138400--Sobic001G143700 Sobic008G138400--Sobic009G234900 Sobic005G148000 Sobic005G148000 Sobic008G138400--Sobic005G148000 Sobic001G089300--Sobic005G189100 Sobic001G089300--Sobic009G234900 Sobic001G089300--Sobic002G006200 Sobic001G089300--Sobic008G138400 Sobic001G089300--Sobic010G121700 Sobic001G089300--Sobic002G097300 Sobic001G089300--Sobic002G156400 Sobic001G089300--Sobic008G024200 Sobic001G089300--Sobic001G143700 Sobic005G140900--Sobic008G138400 Sobic005G140900--Sobic002G156400 Sobic005G140900--Sobic002G097300 Sobic005G140900--Sobic008G036100 Sobic005G140900--Sobic005G189100 Sobic005G140900--Sobic002G006200 Sobic005G140900--Sobic001G089300 Sobic005G140900--Sobic001G143700 Sobic005G140900--Sobic009G234900 Sobic005G189100--Sobic002G006200 Sobic005G189100--Sobic001G089300 Sobic005G189100--Sobic009G234900 Sobic005G189100--Sobic008G138400 Sobic005G189100--Sobic001G143700 Sobic005G189100--Sobic002G097300 Sobic005G189100--Sobic010G121700 Sobic005G189100--Sobic008G024200 Sobic005G189100--Sobic002G156400 Sobic009G234900--Sobic005G189100 Sobic009G234900--Sobic010G121700 Sobic009G234900--Sobic001G089300 Sobic009G234900--Sobic008G024200 Sobic009G234900--Sobic002G006200 Sobic009G234900--Sobic009G047100 Sobic009G234900--Sobic008G138400 Sobic009G234900--Sobic002G156400 Sobic009G234900--Sobic001G143700 Sobic009G047100--Sobic008G024200 Sobic009G047100--Sobic002G006200 Sobic009G047100--Sobic009G234900 Sobic009G047100--Sobic005G189100 Sobic009G047100--Sobic001G089300 Sobic009G047100--Sobic010G121700 Sobic009G047100--Sobic008G138400 Sobic009G047100--Sobic002G097300 Sobic009G047100--Sobic001G143700
Octagon: transcription factors


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