Gene annotation
Transcriptome id Sobic.004G050900.1
Synonym Sb04g004350
Functional annotation OsFBX248 - F-box domain containing protein, expressed
UniProt A0A1Z5RL00
Pfam -
Panther DB PTHR32212 PTHR32212:SF87
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02910 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os07g36520.1 : OsFBX248 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1B02G101200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G000900 OsFBX103 - F-box domain containing protein, expressed -
2 Sobic.009G047100 GEX1, putative, expressed -
3 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
4 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
5 Sobic.009G182100 cysteine proteinase inhibitor precursor protein, putative, expressed -
6 Sobic.006G017700 expressed protein -
7 Sobic.008G138400 expressed protein -
8 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
9 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
10 Sobic.002G006200 - -
11 Sobic.008G036100 expressed protein -
12 Sobic.002G384900 expressed protein -
13 Sobic.002G182701 - -
14 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
15 Sobic.005G189100 transcription factor Dp, putative, expressed -
16 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.009G234900 WRKY43, expressed -
18 Sobic.001G143700 cupin domain containing protein, expressed -
19 Sobic.003G133201 - -
20 Sobic.006G017900 DEFL55 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic004G050900 Sobic004G050900 Sobic005G000900 Sobic005G000900 Sobic004G050900--Sobic005G000900 Sobic009G047100 Sobic009G047100 Sobic004G050900--Sobic009G047100 Sobic005G140900 Sobic005G140900 Sobic004G050900--Sobic005G140900 Sobic002G156400 Sobic002G156400 Sobic004G050900--Sobic002G156400 Sobic009G182100 Sobic009G182100 Sobic004G050900--Sobic009G182100 Sobic006G017700 Sobic006G017700 Sobic004G050900--Sobic006G017700 Sobic008G138400 Sobic008G138400 Sobic004G050900--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic004G050900--Sobic002G097300 Sobic008G024200 Sobic008G024200 Sobic004G050900--Sobic008G024200 Sobic005G000900--Sobic006G017700 Sobic002G182701 Sobic002G182701 Sobic005G000900--Sobic002G182701 Sobic006G017900 Sobic006G017900 Sobic005G000900--Sobic006G017900 Sobic005G000900--Sobic002G156400 Sobic002G384900 Sobic002G384900 Sobic005G000900--Sobic002G384900 Sobic001G211700 Sobic001G211700 Sobic005G000900--Sobic001G211700 Sobic005G000900--Sobic009G182100 Sobic005G000900--Sobic005G140900 Sobic004G100300 Sobic004G100300 Sobic005G000900--Sobic004G100300 Sobic009G047100--Sobic008G024200 Sobic002G006200 Sobic002G006200 Sobic009G047100--Sobic002G006200 Sobic009G234900 Sobic009G234900 Sobic009G047100--Sobic009G234900 Sobic005G189100 Sobic005G189100 Sobic009G047100--Sobic005G189100 Sobic001G089300 Sobic001G089300 Sobic009G047100--Sobic001G089300 Sobic010G121700 Sobic010G121700 Sobic009G047100--Sobic010G121700 Sobic009G047100--Sobic008G138400 Sobic009G047100--Sobic002G097300 Sobic001G143700 Sobic001G143700 Sobic009G047100--Sobic001G143700 Sobic005G140900--Sobic008G138400 Sobic005G140900--Sobic002G156400 Sobic005G140900--Sobic002G097300 Sobic008G036100 Sobic008G036100 Sobic005G140900--Sobic008G036100 Sobic005G140900--Sobic005G189100 Sobic005G140900--Sobic002G006200 Sobic005G140900--Sobic001G089300 Sobic005G140900--Sobic001G143700 Sobic005G140900--Sobic009G234900 Sobic002G156400--Sobic008G138400 Sobic002G156400--Sobic005G140900 Sobic002G156400--Sobic002G097300 Sobic002G156400--Sobic005G189100 Sobic002G156400--Sobic001G089300 Sobic002G156400--Sobic009G234900 Sobic002G156400--Sobic002G006200 Sobic002G156400--Sobic010G121700 Sobic002G156400--Sobic008G036100 Sobic009G182100--Sobic002G182701 Sobic009G182100--Sobic006G017700 Sobic009G182100--Sobic005G000900 Sobic009G182100--Sobic006G017900 Sobic009G182100--Sobic002G156400 Sobic009G182100--Sobic001G211700 Sobic009G182100--Sobic005G140900 Sobic009G182100--Sobic002G384900 Sobic009G182100--Sobic008G138400 Sobic006G017700--Sobic002G182701 Sobic006G017700--Sobic006G017900 Sobic006G017700--Sobic001G211700 Sobic006G017700--Sobic002G384900 Sobic006G017700--Sobic005G000900 Sobic006G017700--Sobic005G140900 Sobic006G017700--Sobic002G156400 Sobic006G017700--Sobic009G182100 Sobic006G017700--Sobic008G138400 Sobic008G138400--Sobic002G097300 Sobic008G138400--Sobic002G156400 Sobic008G138400--Sobic005G140900 Sobic008G138400--Sobic005G189100 Sobic008G138400--Sobic002G006200 Sobic008G138400--Sobic001G089300 Sobic008G138400--Sobic001G143700 Sobic008G138400--Sobic009G234900 Sobic005G148000 Sobic005G148000 Sobic008G138400--Sobic005G148000 Sobic002G097300--Sobic008G138400 Sobic002G097300--Sobic002G006200 Sobic002G097300--Sobic001G143700 Sobic002G097300--Sobic005G140900 Sobic002G097300--Sobic005G189100 Sobic002G097300--Sobic002G156400 Sobic002G097300--Sobic005G148000 Sobic002G097300--Sobic001G089300 Sobic002G097300--Sobic008G036100 Sobic008G024200--Sobic009G047100 Sobic008G024200--Sobic009G234900 Sobic008G024200--Sobic010G121700 Sobic008G024200--Sobic005G189100 Sobic008G024200--Sobic002G006200 Sobic008G024200--Sobic001G089300 Sobic008G024200--Sobic001G143700 Sobic001G167300 Sobic001G167300 Sobic008G024200--Sobic001G167300 Sobic008G024200--Sobic008G138400
Octagon: transcription factors


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