Gene annotation
Transcriptome id Sobic.007G198900.1
Synonym BPM1, Sb07g026710, ATBPM1
Functional annotation MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5YI72
Pfam PF00917 PF00651
Panther DB PTHR24413 PTHR24413:SF136
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os08g41190.1 : MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) Zm00025a030370
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G191200 expressed protein -
2 Sobic.007G082100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.005G058300 expressed protein -
4 Sobic.007G081800 MBTB22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.007G110800 expressed protein -
6 Sobic.010G123800 expressed protein -
7 Sobic.007G167950 - -
8 Sobic.005G087732 - -
9 Sobic.007G031200 - -
10 Sobic.004G046700 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed -
11 Sobic.006G224400 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K12158: ubiquitin-like protein Nedd8
K04551: ubiquitin B
12 Sobic.004G100300 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.009G060100 alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
14 Sobic.007G081100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.004G086900 - -
16 Sobic.007G082300 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.002G307400 MATH domain containing protein, expressed -
18 Sobic.006G017900 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.001G211700 MBTB33 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G182701 - -


Gene co-expression network
sample Sobic007G198900 Sobic007G198900 Sobic003G191200 Sobic003G191200 Sobic007G198900--Sobic003G191200 Sobic007G082100 Sobic007G082100 Sobic007G198900--Sobic007G082100 Sobic005G058300 Sobic005G058300 Sobic007G198900--Sobic005G058300 Sobic007G081800 Sobic007G081800 Sobic007G198900--Sobic007G081800 Sobic007G110800 Sobic007G110800 Sobic007G198900--Sobic007G110800 Sobic010G123800 Sobic010G123800 Sobic007G198900--Sobic010G123800 Sobic007G167950 Sobic007G167950 Sobic007G198900--Sobic007G167950 Sobic005G087732 Sobic005G087732 Sobic007G198900--Sobic005G087732 Sobic007G031200 Sobic007G031200 Sobic007G198900--Sobic007G031200 Sobic003G191200--Sobic007G082100 Sobic003G191200--Sobic007G031200 Sobic004G046700 Sobic004G046700 Sobic003G191200--Sobic004G046700 Sobic003G191200--Sobic010G123800 Sobic003G191200--Sobic007G081800 Sobic003G191200--Sobic005G058300 Sobic006G017900 Sobic006G017900 Sobic003G191200--Sobic006G017900 Sobic004G100300 Sobic004G100300 Sobic003G191200--Sobic004G100300 Sobic001G211700 Sobic001G211700 Sobic003G191200--Sobic001G211700 Sobic007G082100--Sobic003G191200 Sobic007G082100--Sobic004G046700 Sobic007G082100--Sobic001G211700 Sobic007G082100--Sobic006G017900 Sobic007G082100--Sobic010G123800 Sobic002G182701 Sobic002G182701 Sobic007G082100--Sobic002G182701 Sobic009G060100 Sobic009G060100 Sobic007G082100--Sobic009G060100 Sobic007G082100--Sobic007G031200 Sobic007G082100--Sobic007G081800 Sobic005G058300--Sobic007G081800 Sobic005G058300--Sobic010G123800 Sobic005G058300--Sobic004G046700 Sobic005G058300--Sobic007G167950 Sobic005G058300--Sobic005G087732 Sobic006G224400 Sobic006G224400 Sobic005G058300--Sobic006G224400 Sobic005G058300--Sobic007G110800 Sobic005G058300--Sobic009G060100 Sobic004G086900 Sobic004G086900 Sobic005G058300--Sobic004G086900 Sobic007G081800--Sobic005G058300 Sobic007G081800--Sobic010G123800 Sobic007G081800--Sobic004G046700 Sobic007G081800--Sobic006G224400 Sobic007G081800--Sobic007G167950 Sobic007G081800--Sobic005G087732 Sobic007G081800--Sobic007G110800 Sobic007G081800--Sobic009G060100 Sobic007G081800--Sobic006G017900 Sobic007G110800--Sobic005G087732 Sobic007G110800--Sobic007G167950 Sobic007G110800--Sobic004G086900 Sobic007G082300 Sobic007G082300 Sobic007G110800--Sobic007G082300 Sobic007G110800--Sobic005G058300 Sobic007G110800--Sobic006G224400 Sobic007G110800--Sobic007G081800 Sobic007G110800--Sobic010G123800 Sobic007G110800--Sobic004G046700 Sobic010G123800--Sobic004G046700 Sobic010G123800--Sobic007G081800 Sobic010G123800--Sobic005G058300 Sobic010G123800--Sobic006G224400 Sobic010G123800--Sobic007G167950 Sobic010G123800--Sobic005G087732 Sobic010G123800--Sobic006G017900 Sobic010G123800--Sobic001G211700 Sobic010G123800--Sobic007G082100 Sobic007G167950--Sobic005G087732 Sobic007G167950--Sobic007G110800 Sobic007G167950--Sobic004G086900 Sobic007G167950--Sobic007G082300 Sobic007G167950--Sobic005G058300 Sobic007G167950--Sobic006G224400 Sobic007G167950--Sobic007G081800 Sobic007G167950--Sobic010G123800 Sobic007G167950--Sobic004G046700 Sobic005G087732--Sobic007G167950 Sobic005G087732--Sobic007G110800 Sobic005G087732--Sobic004G086900 Sobic005G087732--Sobic007G082300 Sobic005G087732--Sobic005G058300 Sobic005G087732--Sobic006G224400 Sobic005G087732--Sobic007G081800 Sobic005G087732--Sobic010G123800 Sobic005G087732--Sobic004G046700 Sobic007G031200--Sobic003G191200 Sobic007G031200--Sobic004G100300 Sobic007G031200--Sobic002G182701 Sobic005G000900 Sobic005G000900 Sobic007G031200--Sobic005G000900 Sobic007G031200--Sobic007G082100 Sobic009G182100 Sobic009G182100 Sobic007G031200--Sobic009G182100 Sobic007G031200--Sobic006G017900 Sobic007G031200--Sobic001G211700 Sobic006G017700 Sobic006G017700 Sobic007G031200--Sobic006G017700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.