Gene annotation
Transcriptome id Sobic.009G002100.3
Synonym Sb09g000400
Functional annotation expressed protein
UniProt A0A1Z5R187
Pfam PF07889
Panther DB PTHR31903 PTHR31903:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24265 : Protein of unknown function (DUF1664)
RAP-DB (Rice) LOC_Os01g02180.2 : expressed protein
MaizeGDB (Corn) Zm00025a038294
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.009G002100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
2 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
3 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
4 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
5 Sobic.001G240600 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
6 Sobic.008G155700 ankyrin repeat domain-containing protein 44, putative, expressed -
7 Sobic.002G189500 expressed protein -
8 Sobic.004G080800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
9 Sobic.001G220500 CK1_CaseinKinase_1.9 - CK1 includes the casein kinase 1 kinases, expressed -
10 Sobic.007G128000 cytochrome P450, putative, expressed -
11 Sobic.001G029300 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
12 Sobic.003G133600 major facilitator superfamily antiporter, putative, expressed -
13 Sobic.010G242600 OsFBDUF52 - F-box and DUF domain containing protein, expressed -
14 Sobic.007G094700 - -
15 Sobic.004G328200 - -
16 Sobic.008G056600 OsFBX237 - F-box domain containing protein, expressed -
17 Sobic.005G172000 - -
18 Sobic.006G266400 B3 DNA binding domain containing protein, expressed -
19 Sobic.002G190750 - -
20 Sobic.009G048700 expressed protein -


Gene co-expression network
sample Sobic009G002100 Sobic009G002100 Sobic009G145000 Sobic009G145000 Sobic009G002100--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic009G002100--Sobic002G243400 Sobic001G417700 Sobic001G417700 Sobic009G002100--Sobic001G417700 Sobic002G418300 Sobic002G418300 Sobic009G002100--Sobic002G418300 Sobic001G240600 Sobic001G240600 Sobic009G002100--Sobic001G240600 Sobic008G155700 Sobic008G155700 Sobic009G002100--Sobic008G155700 Sobic002G189500 Sobic002G189500 Sobic009G002100--Sobic002G189500 Sobic004G080800 Sobic004G080800 Sobic009G002100--Sobic004G080800 Sobic001G220500 Sobic001G220500 Sobic009G002100--Sobic001G220500 Sobic009G145000--Sobic002G189500 Sobic009G145000--Sobic001G417700 Sobic004G328200 Sobic004G328200 Sobic009G145000--Sobic004G328200 Sobic001G029300 Sobic001G029300 Sobic009G145000--Sobic001G029300 Sobic006G266400 Sobic006G266400 Sobic009G145000--Sobic006G266400 Sobic004G190400 Sobic004G190400 Sobic009G145000--Sobic004G190400 Sobic009G008000 Sobic009G008000 Sobic009G145000--Sobic009G008000 Sobic004G203150 Sobic004G203150 Sobic009G145000--Sobic004G203150 Sobic007G094700 Sobic007G094700 Sobic009G145000--Sobic007G094700 Sobic002G243400--Sobic009G145000 Sobic002G243400--Sobic001G417700 Sobic009G048700 Sobic009G048700 Sobic002G243400--Sobic009G048700 Sobic002G243400--Sobic002G189500 Sobic010G061600 Sobic010G061600 Sobic002G243400--Sobic010G061600 Sobic002G243400--Sobic009G008000 Sobic002G243400--Sobic009G002100 Sobic002G243400--Sobic002G418300 Sobic002G243400--Sobic004G190400 Sobic007G128000 Sobic007G128000 Sobic001G417700--Sobic007G128000 Sobic001G417700--Sobic002G418300 Sobic001G417700--Sobic007G094700 Sobic001G417700--Sobic009G145000 Sobic002G101600 Sobic002G101600 Sobic001G417700--Sobic002G101600 Sobic001G417700--Sobic006G266400 Sobic001G136000 Sobic001G136000 Sobic001G417700--Sobic001G136000 Sobic001G417700--Sobic002G189500 Sobic001G417700--Sobic001G240600 Sobic002G418300--Sobic001G417700 Sobic002G418300--Sobic007G094700 Sobic003G133600 Sobic003G133600 Sobic002G418300--Sobic003G133600 Sobic002G418300--Sobic004G203150 Sobic002G418300--Sobic001G029300 Sobic002G418300--Sobic002G101600 Sobic002G418300--Sobic004G328200 Sobic002G418300--Sobic002G189500 Sobic002G418300--Sobic008G155700 Sobic001G240600--Sobic006G266400 Sobic010G177200 Sobic010G177200 Sobic001G240600--Sobic010G177200 Sobic003G070400 Sobic003G070400 Sobic001G240600--Sobic003G070400 Sobic009G068400 Sobic009G068400 Sobic001G240600--Sobic009G068400 Sobic007G197000 Sobic007G197000 Sobic001G240600--Sobic007G197000 Sobic004G273600 Sobic004G273600 Sobic001G240600--Sobic004G273600 Sobic009G207700 Sobic009G207700 Sobic001G240600--Sobic009G207700 Sobic006G236400 Sobic006G236400 Sobic001G240600--Sobic006G236400 Sobic010G242600 Sobic010G242600 Sobic001G240600--Sobic010G242600 Sobic008G155700--Sobic007G094700 Sobic008G155700--Sobic001G417700 Sobic008G155700--Sobic002G418300 Sobic008G155700--Sobic004G203150 Sobic008G155700--Sobic009G048700 Sobic007G219601 Sobic007G219601 Sobic008G155700--Sobic007G219601 Sobic008G155700--Sobic003G133600 Sobic008G155700--Sobic009G008000 Sobic008G155700--Sobic009G145000 Sobic002G189500--Sobic004G190400 Sobic002G189500--Sobic006G266400 Sobic002G189500--Sobic001G029300 Sobic002G189500--Sobic010G242600 Sobic001G163666 Sobic001G163666 Sobic002G189500--Sobic001G163666 Sobic002G189500--Sobic002G101600 Sobic002G189500--Sobic009G145000 Sobic002G189500--Sobic001G240600 Sobic002G189500--Sobic010G177200 Sobic010G140100 Sobic010G140100 Sobic004G080800--Sobic010G140100 Sobic010G271600 Sobic010G271600 Sobic004G080800--Sobic010G271600 Sobic009G098400 Sobic009G098400 Sobic004G080800--Sobic009G098400 Sobic006G173400 Sobic006G173400 Sobic004G080800--Sobic006G173400 Sobic004G187400 Sobic004G187400 Sobic004G080800--Sobic004G187400 Sobic010G190500 Sobic010G190500 Sobic004G080800--Sobic010G190500 Sobic010G257800 Sobic010G257800 Sobic004G080800--Sobic010G257800 Sobic002G061300 Sobic002G061300 Sobic004G080800--Sobic002G061300 Sobic005G214700 Sobic005G214700 Sobic004G080800--Sobic005G214700 Sobic007G226700 Sobic007G226700 Sobic001G220500--Sobic007G226700 Sobic001G220500--Sobic004G080800 Sobic001G220500--Sobic001G240600 Sobic003G024100 Sobic003G024100 Sobic001G220500--Sobic003G024100 Sobic001G142501 Sobic001G142501 Sobic001G220500--Sobic001G142501 Sobic005G172000 Sobic005G172000 Sobic001G220500--Sobic005G172000 Sobic001G220500--Sobic010G242600 Sobic003G191400 Sobic003G191400 Sobic001G220500--Sobic003G191400 Sobic006G001100 Sobic006G001100 Sobic001G220500--Sobic006G001100
Octagon: transcription factors


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