Gene annotation
Transcriptome id Sobic.010G242600.1
Synonym Sb10g028260
Functional annotation OsFBDUF52 - F-box and DUF domain containing protein, expressed
UniProt A0A1W0VUI5
Pfam PF03478
Panther DB PTHR11102 PTHR11102:SF84
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64840 : Protein of unknown function (DUF295)
RAP-DB (Rice) LOC_Os11g37300.1 : OsFBDUF53 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G242600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G266400 B3 DNA binding domain containing protein, expressed -
2 Sobic.001G029300 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
3 Sobic.002G189500 expressed protein -
4 Sobic.001G163666 - -
5 Sobic.009G207700 cell cycle control protein, putative, expressed -
6 Sobic.010G177200 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
7 Sobic.002G101600 - -
8 Sobic.006G236400 glutaredoxin, putative, expressed -
9 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
10 Sobic.001G240600 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
11 Sobic.009G250300 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.006G074150 - -
13 Sobic.006G205400 villin protein, putative, expressed -
14 Sobic.004G190400 expressed protein -
15 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.002G190750 - -
17 Sobic.001G337100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
18 Sobic.002G333001 - -
19 Sobic.007G176900 beta-galactosidase precursor, putative, expressed -
20 Sobic.003G297100 expressed protein -


Gene co-expression network
sample Sobic010G242600 Sobic010G242600 Sobic006G266400 Sobic006G266400 Sobic010G242600--Sobic006G266400 Sobic001G029300 Sobic001G029300 Sobic010G242600--Sobic001G029300 Sobic002G189500 Sobic002G189500 Sobic010G242600--Sobic002G189500 Sobic001G163666 Sobic001G163666 Sobic010G242600--Sobic001G163666 Sobic009G207700 Sobic009G207700 Sobic010G242600--Sobic009G207700 Sobic010G177200 Sobic010G177200 Sobic010G242600--Sobic010G177200 Sobic002G101600 Sobic002G101600 Sobic010G242600--Sobic002G101600 Sobic006G236400 Sobic006G236400 Sobic010G242600--Sobic006G236400 Sobic002G015900 Sobic002G015900 Sobic010G242600--Sobic002G015900 Sobic006G266400--Sobic002G101600 Sobic006G266400--Sobic002G189500 Sobic006G266400--Sobic010G242600 Sobic006G266400--Sobic010G177200 Sobic001G240600 Sobic001G240600 Sobic006G266400--Sobic001G240600 Sobic006G266400--Sobic001G029300 Sobic009G250300 Sobic009G250300 Sobic006G266400--Sobic009G250300 Sobic006G266400--Sobic002G015900 Sobic003G070400 Sobic003G070400 Sobic006G266400--Sobic003G070400 Sobic001G029300--Sobic001G163666 Sobic001G029300--Sobic002G189500 Sobic001G029300--Sobic010G242600 Sobic001G029300--Sobic006G266400 Sobic001G029300--Sobic009G207700 Sobic001G029300--Sobic002G101600 Sobic001G029300--Sobic006G236400 Sobic001G029300--Sobic010G177200 Sobic004G328200 Sobic004G328200 Sobic001G029300--Sobic004G328200 Sobic004G190400 Sobic004G190400 Sobic002G189500--Sobic004G190400 Sobic002G189500--Sobic006G266400 Sobic002G189500--Sobic001G029300 Sobic002G189500--Sobic010G242600 Sobic002G189500--Sobic001G163666 Sobic002G189500--Sobic002G101600 Sobic009G145000 Sobic009G145000 Sobic002G189500--Sobic009G145000 Sobic002G189500--Sobic001G240600 Sobic002G189500--Sobic010G177200 Sobic001G163666--Sobic001G029300 Sobic001G163666--Sobic010G242600 Sobic001G163666--Sobic009G207700 Sobic001G163666--Sobic002G015900 Sobic009G152000 Sobic009G152000 Sobic001G163666--Sobic009G152000 Sobic001G163666--Sobic002G189500 Sobic001G163666--Sobic006G266400 Sobic001G163666--Sobic010G177200 Sobic001G163666--Sobic002G101600 Sobic006G074150 Sobic006G074150 Sobic009G207700--Sobic006G074150 Sobic001G093100 Sobic001G093100 Sobic009G207700--Sobic001G093100 Sobic009G207700--Sobic010G177200 Sobic005G040700 Sobic005G040700 Sobic009G207700--Sobic005G040700 Sobic010G051000 Sobic010G051000 Sobic009G207700--Sobic010G051000 Sobic001G306500 Sobic001G306500 Sobic009G207700--Sobic001G306500 Sobic001G024900 Sobic001G024900 Sobic009G207700--Sobic001G024900 Sobic007G222100 Sobic007G222100 Sobic009G207700--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic009G207700--Sobic001G288400 Sobic010G177200--Sobic002G015900 Sobic010G177200--Sobic009G250300 Sobic001G063300 Sobic001G063300 Sobic010G177200--Sobic001G063300 Sobic010G177200--Sobic009G207700 Sobic010G177200--Sobic006G074150 Sobic006G205400 Sobic006G205400 Sobic010G177200--Sobic006G205400 Sobic007G145500 Sobic007G145500 Sobic010G177200--Sobic007G145500 Sobic010G207800 Sobic010G207800 Sobic010G177200--Sobic010G207800 Sobic010G216100 Sobic010G216100 Sobic010G177200--Sobic010G216100 Sobic002G101600--Sobic006G266400 Sobic002G101600--Sobic009G250300 Sobic002G101600--Sobic002G015900 Sobic002G101600--Sobic004G328200 Sobic002G101600--Sobic001G029300 Sobic004G054900 Sobic004G054900 Sobic002G101600--Sobic004G054900 Sobic002G101600--Sobic010G177200 Sobic001G337100 Sobic001G337100 Sobic002G101600--Sobic001G337100 Sobic002G101600--Sobic001G163666 Sobic007G042800 Sobic007G042800 Sobic006G236400--Sobic007G042800 Sobic006G236400--Sobic009G207700 Sobic006G236400--Sobic010G177200 Sobic006G236400--Sobic006G074150 Sobic004G255900 Sobic004G255900 Sobic006G236400--Sobic004G255900 Sobic005G191300 Sobic005G191300 Sobic006G236400--Sobic005G191300 Sobic008G043300 Sobic008G043300 Sobic006G236400--Sobic008G043300 Sobic001G092500 Sobic001G092500 Sobic006G236400--Sobic001G092500 Sobic004G134000 Sobic004G134000 Sobic006G236400--Sobic004G134000 Sobic002G015900--Sobic009G250300 Sobic002G015900--Sobic001G337100 Sobic002G015900--Sobic001G063300 Sobic008G086500 Sobic008G086500 Sobic002G015900--Sobic008G086500 Sobic005G006400 Sobic005G006400 Sobic002G015900--Sobic005G006400 Sobic002G194201 Sobic002G194201 Sobic002G015900--Sobic002G194201 Sobic003G007650 Sobic003G007650 Sobic002G015900--Sobic003G007650 Sobic007G035200 Sobic007G035200 Sobic002G015900--Sobic007G035200 Sobic007G134501 Sobic007G134501 Sobic002G015900--Sobic007G134501
Octagon: transcription factors


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