Gene annotation
Transcriptome id Sobic.001G029300.5,Sobic.001G029300.1,Sobic.001G029300.2,Sobic.001G029300.3,Sobic.001G029300.4
Synonym ASA2, Sb01g002760, ATHANSYNAB
Functional annotation anthranilate synthase component I-1, chloroplast precursor, putative, expressed
UniProt A0A1Z5S4M1 , A0A1Z5S436 , A0A1Z5S425 , A0A1B6QH50 , A0A1B6QH20
Pfam PF04715 PF00425
Panther DB PTHR11236 PTHR11236:SF20
NCBI CDD KOG1223; Isochorismate synthase
KEGG Orthology K01657; anthranilate synthase component I
Gene Ontology GO:0016833; oxo-acid-lyase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT2G29690 : anthranilate synthase 2,anthranilate synthase alpha subunit 1
RAP-DB (Rice) LOC_Os03g61120.1 : anthranilate synthase component I-1, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016402 , Zm00025a008874
Brachypodium KQK12367
Barley HORVU5Hr1G115160.10 , HORVU5Hr1G115160.4 , HORVU5Hr1G115160.7 , HORVU5Hr1G115160.6 , HORVU5Hr1G115160.1 , HORVU5Hr1G115160.5 , HORVU5Hr1G115160.3 , HORVU5Hr1G115160.2 , HORVU5Hr1G115160.9 , HORVU5Hr1G115160.8
Wheat TraesCS5B02G502700 , TraesCS5D02G503800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G029300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G163666 - -
2 Sobic.002G189500 expressed protein -
3 Sobic.010G242600 OsFBDUF52 - F-box and DUF domain containing protein, expressed -
4 Sobic.006G266400 B3 DNA binding domain containing protein, expressed -
5 Sobic.009G207700 cell cycle control protein, putative, expressed -
6 Sobic.002G101600 - -
7 Sobic.006G236400 glutaredoxin, putative, expressed -
8 Sobic.010G177200 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
9 Sobic.004G328200 - -
10 Sobic.002G190750 - -
11 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.006G074150 - -
13 Sobic.003G297100 expressed protein -
14 Sobic.009G250300 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.001G068066 - -
16 Sobic.004G190400 expressed protein -
17 Sobic.003G133600 major facilitator superfamily antiporter, putative, expressed -
18 Sobic.004G255900 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
19 Sobic.009G152000 Yip1 domain containing protein, expressed -
20 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic001G029300 Sobic001G029300 Sobic001G163666 Sobic001G163666 Sobic001G029300--Sobic001G163666 Sobic002G189500 Sobic002G189500 Sobic001G029300--Sobic002G189500 Sobic010G242600 Sobic010G242600 Sobic001G029300--Sobic010G242600 Sobic006G266400 Sobic006G266400 Sobic001G029300--Sobic006G266400 Sobic009G207700 Sobic009G207700 Sobic001G029300--Sobic009G207700 Sobic002G101600 Sobic002G101600 Sobic001G029300--Sobic002G101600 Sobic006G236400 Sobic006G236400 Sobic001G029300--Sobic006G236400 Sobic010G177200 Sobic010G177200 Sobic001G029300--Sobic010G177200 Sobic004G328200 Sobic004G328200 Sobic001G029300--Sobic004G328200 Sobic001G163666--Sobic001G029300 Sobic001G163666--Sobic010G242600 Sobic001G163666--Sobic009G207700 Sobic002G015900 Sobic002G015900 Sobic001G163666--Sobic002G015900 Sobic009G152000 Sobic009G152000 Sobic001G163666--Sobic009G152000 Sobic001G163666--Sobic002G189500 Sobic001G163666--Sobic006G266400 Sobic001G163666--Sobic010G177200 Sobic001G163666--Sobic002G101600 Sobic004G190400 Sobic004G190400 Sobic002G189500--Sobic004G190400 Sobic002G189500--Sobic006G266400 Sobic002G189500--Sobic001G029300 Sobic002G189500--Sobic010G242600 Sobic002G189500--Sobic001G163666 Sobic002G189500--Sobic002G101600 Sobic009G145000 Sobic009G145000 Sobic002G189500--Sobic009G145000 Sobic001G240600 Sobic001G240600 Sobic002G189500--Sobic001G240600 Sobic002G189500--Sobic010G177200 Sobic010G242600--Sobic006G266400 Sobic010G242600--Sobic001G029300 Sobic010G242600--Sobic002G189500 Sobic010G242600--Sobic001G163666 Sobic010G242600--Sobic009G207700 Sobic010G242600--Sobic010G177200 Sobic010G242600--Sobic002G101600 Sobic010G242600--Sobic006G236400 Sobic010G242600--Sobic002G015900 Sobic006G266400--Sobic002G101600 Sobic006G266400--Sobic002G189500 Sobic006G266400--Sobic010G242600 Sobic006G266400--Sobic010G177200 Sobic006G266400--Sobic001G240600 Sobic006G266400--Sobic001G029300 Sobic009G250300 Sobic009G250300 Sobic006G266400--Sobic009G250300 Sobic006G266400--Sobic002G015900 Sobic003G070400 Sobic003G070400 Sobic006G266400--Sobic003G070400 Sobic006G074150 Sobic006G074150 Sobic009G207700--Sobic006G074150 Sobic001G093100 Sobic001G093100 Sobic009G207700--Sobic001G093100 Sobic009G207700--Sobic010G177200 Sobic005G040700 Sobic005G040700 Sobic009G207700--Sobic005G040700 Sobic010G051000 Sobic010G051000 Sobic009G207700--Sobic010G051000 Sobic001G306500 Sobic001G306500 Sobic009G207700--Sobic001G306500 Sobic001G024900 Sobic001G024900 Sobic009G207700--Sobic001G024900 Sobic007G222100 Sobic007G222100 Sobic009G207700--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic009G207700--Sobic001G288400 Sobic002G101600--Sobic006G266400 Sobic002G101600--Sobic009G250300 Sobic002G101600--Sobic002G015900 Sobic002G101600--Sobic004G328200 Sobic002G101600--Sobic001G029300 Sobic004G054900 Sobic004G054900 Sobic002G101600--Sobic004G054900 Sobic002G101600--Sobic010G177200 Sobic001G337100 Sobic001G337100 Sobic002G101600--Sobic001G337100 Sobic002G101600--Sobic001G163666 Sobic007G042800 Sobic007G042800 Sobic006G236400--Sobic007G042800 Sobic006G236400--Sobic009G207700 Sobic006G236400--Sobic010G177200 Sobic006G236400--Sobic006G074150 Sobic004G255900 Sobic004G255900 Sobic006G236400--Sobic004G255900 Sobic005G191300 Sobic005G191300 Sobic006G236400--Sobic005G191300 Sobic008G043300 Sobic008G043300 Sobic006G236400--Sobic008G043300 Sobic001G092500 Sobic001G092500 Sobic006G236400--Sobic001G092500 Sobic004G134000 Sobic004G134000 Sobic006G236400--Sobic004G134000 Sobic010G177200--Sobic002G015900 Sobic010G177200--Sobic009G250300 Sobic001G063300 Sobic001G063300 Sobic010G177200--Sobic001G063300 Sobic010G177200--Sobic009G207700 Sobic010G177200--Sobic006G074150 Sobic006G205400 Sobic006G205400 Sobic010G177200--Sobic006G205400 Sobic007G145500 Sobic007G145500 Sobic010G177200--Sobic007G145500 Sobic010G207800 Sobic010G207800 Sobic010G177200--Sobic010G207800 Sobic010G216100 Sobic010G216100 Sobic010G177200--Sobic010G216100 Sobic004G328200--Sobic002G101600 Sobic004G328200--Sobic001G029300 Sobic004G328200--Sobic001G163666 Sobic003G133600 Sobic003G133600 Sobic004G328200--Sobic003G133600 Sobic004G328200--Sobic006G266400 Sobic004G328200--Sobic002G189500 Sobic001G068066 Sobic001G068066 Sobic004G328200--Sobic001G068066 Sobic004G328200--Sobic010G242600 Sobic004G328200--Sobic009G207700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.