Gene annotation
Transcriptome id Sobic.009G207700.1
Synonym Sb09g026420
Functional annotation cell cycle control protein, putative, expressed
UniProt C5Z1H1
Pfam PF03381
Panther DB PTHR10926 PTHR10926:SF28
NCBI CDD KOG2952; Cell cycle control protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G79450 : ALA-interacting subunit 5
RAP-DB (Rice) LOC_Os05g45370.1 : cell cycle control protein, putative, expressed
MaizeGDB (Corn) Zm00025a044268
Brachypodium KQK23950 , KQK05252
Barley HORVU1Hr1G081400.10 , HORVU1Hr1G081400.11 , HORVU1Hr1G081400.4 , HORVU1Hr1G081400.5 , HORVU1Hr1G081400.6 , HORVU1Hr1G081400.7 , HORVU1Hr1G081400.1 , HORVU1Hr1G081400.2 , HORVU1Hr1G081400.3 , HORVU1Hr1G081400.8 , HORVU5Hr1G020720.4 , HORVU5Hr1G020720.5 , HORVU5Hr1G020720.6 , HORVU5Hr1G020720.7 , HORVU5Hr1G020720.1 , HORVU5Hr1G020720.2 , HORVU5Hr1G020720.3 , HORVU5Hr1G020720.8 , HORVU5Hr1G020720.9 , HORVU5Hr1G020720.14 , HORVU5Hr1G020720.15 , HORVU5Hr1G020720.12 , HORVU5Hr1G020720.13 , HORVU5Hr1G020720.11 , HORVU1Hr1G081400.9 , HORVU6Hr1G093390.4 , HORVU6Hr1G093390.1 , HORVU6Hr1G093390.2 , HORVU6Hr1G093390.3
Wheat TraesCS1A02G350000 , TraesCS1A02G350000 , TraesCS1A02G350000 , TraesCS5A02G519200 , TraesCS4B02G350400 , TraesCS1B02G364300 , TraesCS1D02G352700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G074150 - -
2 Sobic.001G093100 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
3 Sobic.010G177200 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
4 Sobic.005G040700 amino acid permease family protein, putative, expressed -
5 Sobic.010G051000 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
6 Sobic.001G306500 expansin precursor, putative, expressed -
7 Sobic.001G024900 expressed protein -
8 Sobic.007G222100 - -
9 Sobic.001G288400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
10 Sobic.009G203900 profilin domain containing protein, expressed K05759: profilin
11 Sobic.004G100900 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.007G131000 dynamin-2B, putative, expressed K01528: dynamin 1/3
13 Sobic.003G175950 - -
14 Sobic.010G144700 plant protein of unknown function domain containing protein, expressed -
15 Sobic.001G130500 - -
16 Sobic.001G332000 pollen allergen, putative, expressed -
17 Sobic.001G306400 expansin precursor, putative, expressed -
18 Sobic.009G082900 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
19 Sobic.006G159000 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
20 Sobic.001G269800 - -


Gene co-expression network
sample Sobic009G207700 Sobic009G207700 Sobic006G074150 Sobic006G074150 Sobic009G207700--Sobic006G074150 Sobic001G093100 Sobic001G093100 Sobic009G207700--Sobic001G093100 Sobic010G177200 Sobic010G177200 Sobic009G207700--Sobic010G177200 Sobic005G040700 Sobic005G040700 Sobic009G207700--Sobic005G040700 Sobic010G051000 Sobic010G051000 Sobic009G207700--Sobic010G051000 Sobic001G306500 Sobic001G306500 Sobic009G207700--Sobic001G306500 Sobic001G024900 Sobic001G024900 Sobic009G207700--Sobic001G024900 Sobic007G222100 Sobic007G222100 Sobic009G207700--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic009G207700--Sobic001G288400 Sobic006G074150--Sobic009G207700 Sobic006G074150--Sobic001G093100 Sobic006G074150--Sobic005G040700 Sobic001G130500 Sobic001G130500 Sobic006G074150--Sobic001G130500 Sobic006G074150--Sobic010G051000 Sobic006G074150--Sobic001G306500 Sobic003G175950 Sobic003G175950 Sobic006G074150--Sobic003G175950 Sobic006G074150--Sobic007G222100 Sobic009G203900 Sobic009G203900 Sobic006G074150--Sobic009G203900 Sobic001G093100--Sobic001G288400 Sobic001G093100--Sobic001G306500 Sobic001G093100--Sobic001G024900 Sobic006G159000 Sobic006G159000 Sobic001G093100--Sobic006G159000 Sobic001G093100--Sobic007G222100 Sobic001G093100--Sobic010G051000 Sobic001G306400 Sobic001G306400 Sobic001G093100--Sobic001G306400 Sobic009G082900 Sobic009G082900 Sobic001G093100--Sobic009G082900 Sobic005G025600 Sobic005G025600 Sobic001G093100--Sobic005G025600 Sobic002G015900 Sobic002G015900 Sobic010G177200--Sobic002G015900 Sobic009G250300 Sobic009G250300 Sobic010G177200--Sobic009G250300 Sobic001G063300 Sobic001G063300 Sobic010G177200--Sobic001G063300 Sobic010G177200--Sobic009G207700 Sobic010G177200--Sobic006G074150 Sobic006G205400 Sobic006G205400 Sobic010G177200--Sobic006G205400 Sobic007G145500 Sobic007G145500 Sobic010G177200--Sobic007G145500 Sobic010G207800 Sobic010G207800 Sobic010G177200--Sobic010G207800 Sobic010G216100 Sobic010G216100 Sobic010G177200--Sobic010G216100 Sobic005G040700--Sobic003G175950 Sobic001G332000 Sobic001G332000 Sobic005G040700--Sobic001G332000 Sobic005G040700--Sobic010G051000 Sobic005G040700--Sobic001G130500 Sobic001G329200 Sobic001G329200 Sobic005G040700--Sobic001G329200 Sobic001G269100 Sobic001G269100 Sobic005G040700--Sobic001G269100 Sobic005G040700--Sobic007G222100 Sobic001G287400 Sobic001G287400 Sobic005G040700--Sobic001G287400 Sobic005G040700--Sobic001G306500 Sobic010G051000--Sobic007G222100 Sobic010G051000--Sobic001G306500 Sobic010G051000--Sobic001G024900 Sobic010G051000--Sobic001G288400 Sobic010G051000--Sobic005G040700 Sobic010G051000--Sobic009G203900 Sobic010G051000--Sobic003G175950 Sobic010G051000--Sobic001G130500 Sobic004G100900 Sobic004G100900 Sobic010G051000--Sobic004G100900 Sobic001G306500--Sobic001G024900 Sobic001G306500--Sobic007G222100 Sobic001G306500--Sobic001G288400 Sobic001G306500--Sobic010G051000 Sobic001G306500--Sobic001G093100 Sobic001G306500--Sobic009G203900 Sobic001G306500--Sobic004G100900 Sobic001G306500--Sobic001G306400 Sobic001G306500--Sobic005G040700 Sobic001G024900--Sobic001G306500 Sobic001G024900--Sobic007G222100 Sobic001G024900--Sobic001G288400 Sobic001G024900--Sobic010G051000 Sobic001G024900--Sobic009G203900 Sobic001G024900--Sobic004G100900 Sobic001G024900--Sobic001G306400 Sobic001G024900--Sobic001G093100 Sobic001G269800 Sobic001G269800 Sobic001G024900--Sobic001G269800 Sobic007G222100--Sobic001G024900 Sobic007G222100--Sobic010G051000 Sobic007G222100--Sobic001G306500 Sobic007G222100--Sobic009G203900 Sobic007G222100--Sobic001G288400 Sobic007G222100--Sobic004G100900 Sobic007G222100--Sobic001G269800 Sobic007G222100--Sobic005G040700 Sobic007G222100--Sobic001G306400 Sobic001G288400--Sobic001G306500 Sobic001G288400--Sobic001G024900 Sobic001G288400--Sobic007G222100 Sobic001G288400--Sobic010G051000 Sobic001G288400--Sobic001G093100 Sobic001G288400--Sobic006G159000 Sobic001G288400--Sobic004G100900 Sobic001G288400--Sobic009G082900 Sobic010G144700 Sobic010G144700 Sobic001G288400--Sobic010G144700
Octagon: transcription factors


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