Gene annotation
Transcriptome id Sobic.001G076600.1,Sobic.001G076600.2,Sobic.001G076600.3
Synonym Sb01g006920
Functional annotation hydrolase, acting on carbon-nitrogen, putative, expressed
UniProt A0A1Z5S4T3 , A0A1B6QHS1 , A0A1Z5S4Q1
Pfam PF04765
Panther DB PTHR12956 PTHR12956:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42660 : Protein of unknown function (DUF616)
RAP-DB (Rice) LOC_Os03g55920.1 : hydrolase, acting on carbon-nitrogen, putative, expressed
MaizeGDB (Corn) Zm00025a016699
Brachypodium KQK13003
Barley HORVU5Hr1G098320.28 , HORVU5Hr1G098320.29 , HORVU5Hr1G098320.22 , HORVU5Hr1G098320.23 , HORVU5Hr1G098320.20 , HORVU5Hr1G098320.21 , HORVU5Hr1G098320.26 , HORVU5Hr1G098320.27 , HORVU5Hr1G098320.24 , HORVU5Hr1G098320.25 , HORVU5Hr1G098320.3 , HORVU5Hr1G098320.2 , HORVU5Hr1G098320.1 , HORVU5Hr1G098320.7 , HORVU5Hr1G098320.6 , HORVU5Hr1G098320.5 , HORVU5Hr1G098320.4 , HORVU5Hr1G098320.9 , HORVU5Hr1G098320.8 , HORVU5Hr1G098320.12 , HORVU5Hr1G098320.11 , HORVU5Hr1G098320.10 , HORVU5Hr1G098320.17 , HORVU5Hr1G098320.16 , HORVU5Hr1G098320.15 , HORVU5Hr1G098320.14 , HORVU5Hr1G098320.19 , HORVU5Hr1G098320.18 , HORVU5Hr1G098320.35 , HORVU5Hr1G098320.36 , HORVU5Hr1G098320.31 , HORVU5Hr1G098320.30 , HORVU5Hr1G098320.33 , HORVU5Hr1G098320.32
Wheat TraesCS5D02G414500 , TraesCS5B02G409300 , TraesCS5A02G404400
Populus -


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cDNA sequences
Sobic.001G076600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
2 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
3 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
4 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
5 Sobic.002G299500 expressed protein -
6 Sobic.004G045632 - -
7 Sobic.003G258100 dynamin family protein, putative, expressed -
8 Sobic.005G173700 - -
9 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
10 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
11 Sobic.010G058300 expressed protein -
12 Sobic.009G002100 expressed protein -
13 Sobic.008G007800 - -
14 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
15 Sobic.001G506400 expressed protein -
16 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
17 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.003G005700 AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
20 Sobic.008G007600 - -


Gene co-expression network
sample Sobic001G076600 Sobic001G076600 Sobic003G352900 Sobic003G352900 Sobic001G076600--Sobic003G352900 Sobic007G144100 Sobic007G144100 Sobic001G076600--Sobic007G144100 Sobic008G166100 Sobic008G166100 Sobic001G076600--Sobic008G166100 Sobic004G038400 Sobic004G038400 Sobic001G076600--Sobic004G038400 Sobic002G299500 Sobic002G299500 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic003G376900 Sobic003G376900 Sobic001G076600--Sobic003G376900 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic005G045800 Sobic005G045800 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic001G506400 Sobic001G506400 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400 Sobic001G384200 Sobic001G384200 Sobic008G166100--Sobic001G384200 Sobic007G039200 Sobic007G039200 Sobic008G166100--Sobic007G039200 Sobic009G178400 Sobic009G178400 Sobic008G166100--Sobic009G178400 Sobic001G322400 Sobic001G322400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic001G340800 Sobic001G340800 Sobic008G166100--Sobic001G340800 Sobic001G387300 Sobic001G387300 Sobic008G166100--Sobic001G387300 Sobic001G432200 Sobic001G432200 Sobic008G166100--Sobic001G432200 Sobic004G038400--Sobic005G173700 Sobic009G048700 Sobic009G048700 Sobic004G038400--Sobic009G048700 Sobic004G038400--Sobic001G076600 Sobic004G168900 Sobic004G168900 Sobic004G038400--Sobic004G168900 Sobic003G005700 Sobic003G005700 Sobic004G038400--Sobic003G005700 Sobic004G038400--Sobic007G144100 Sobic002G243400 Sobic002G243400 Sobic004G038400--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic004G038400--Sobic008G056600 Sobic009G002100 Sobic009G002100 Sobic004G038400--Sobic009G002100 Sobic008G171900 Sobic008G171900 Sobic002G299500--Sobic008G171900 Sobic002G299500--Sobic003G376900 Sobic002G299500--Sobic009G163100 Sobic005G020600 Sobic005G020600 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic002G299500--Sobic003G352900 Sobic004G250800 Sobic004G250800 Sobic002G299500--Sobic004G250800 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000 Sobic004G045632--Sobic010G058300 Sobic004G045632--Sobic007G144100 Sobic004G045632--Sobic001G076600 Sobic004G045632--Sobic008G166100 Sobic004G045632--Sobic004G038400 Sobic004G045632--Sobic009G002100 Sobic004G045632--Sobic002G243400 Sobic004G045632--Sobic003G352900 Sobic010G027100 Sobic010G027100 Sobic004G045632--Sobic010G027100 Sobic003G258100--Sobic007G144100 Sobic003G258100--Sobic003G217800 Sobic010G263400 Sobic010G263400 Sobic003G258100--Sobic010G263400 Sobic003G258100--Sobic001G076600 Sobic003G258100--Sobic003G352900 Sobic003G258100--Sobic001G506400 Sobic007G060100 Sobic007G060100 Sobic003G258100--Sobic007G060100 Sobic003G258100--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G258100--Sobic003G018000 Sobic005G173700--Sobic004G038400 Sobic008G155700 Sobic008G155700 Sobic005G173700--Sobic008G155700 Sobic005G144500 Sobic005G144500 Sobic005G173700--Sobic005G144500 Sobic005G173700--Sobic009G002100 Sobic005G173700--Sobic009G048700 Sobic010G038000 Sobic010G038000 Sobic005G173700--Sobic010G038000 Sobic005G173700--Sobic001G076600 Sobic006G254400 Sobic006G254400 Sobic005G173700--Sobic006G254400 Sobic009G006700 Sobic009G006700 Sobic005G173700--Sobic009G006700 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic001G435700 Sobic001G435700 Sobic003G376900--Sobic001G435700 Sobic003G376900--Sobic005G045800 Sobic003G376900--Sobic001G072000
Octagon: transcription factors


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