Gene annotation
Transcriptome id Sobic.009G201000.2
Synonym Sb09g025850
Functional annotation hydrolase, acting on carbon-nitrogen, putative, expressed
UniProt A0A1Z5R4M3
Pfam PF04765
Panther DB PTHR12956 PTHR12956:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28240 : Protein of unknown function (DUF616)
RAP-DB (Rice) LOC_Os01g19870.1 : hydrolase, acting on carbon-nitrogen, putative, expressed
MaizeGDB (Corn) Zm00025a037963 , Zm00025a037967
Brachypodium KQK05349 , KQK05237 , KQK05236
Barley HORVU1Hr1G076170.14 , HORVU1Hr1G076170.15 , HORVU1Hr1G076170.16 , HORVU1Hr1G076170.10 , HORVU1Hr1G076170.11 , HORVU1Hr1G076170.12 , HORVU1Hr1G076170.13 , HORVU1Hr1G076170.8 , HORVU1Hr1G076170.9 , HORVU1Hr1G076170.6 , HORVU1Hr1G076170.7 , HORVU1Hr1G076170.4 , HORVU1Hr1G076170.5 , HORVU1Hr1G076170.2 , HORVU1Hr1G076170.3 , HORVU1Hr1G076170.1
Wheat TraesCS1D02G341800 , TraesCS1A02G339800 , TraesCS1A02G339800 , TraesCS1B02G352100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
2 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
3 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
4 Sobic.002G362500 expressed protein -
5 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
6 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
7 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
8 Sobic.007G039200 MYB family transcription factor, putative, expressed -
9 Sobic.006G156400 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
10 Sobic.003G342500 methyltransferase, putative, expressed -
11 Sobic.003G024100 MRH1, putative, expressed -
12 Sobic.009G242600 ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
13 Sobic.009G002100 expressed protein -
14 Sobic.008G159701 - -
15 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
16 Sobic.001G387300 exostosin family domain containing protein, expressed -
17 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
18 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.003G005700 AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
20 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -


Gene co-expression network
sample Sobic009G201000 Sobic009G201000 Sobic003G352900 Sobic003G352900 Sobic009G201000--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic009G201000--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic009G201000--Sobic001G384200 Sobic002G362500 Sobic002G362500 Sobic009G201000--Sobic002G362500 Sobic001G072000 Sobic001G072000 Sobic009G201000--Sobic001G072000 Sobic006G265800 Sobic006G265800 Sobic009G201000--Sobic006G265800 Sobic001G322400 Sobic001G322400 Sobic009G201000--Sobic001G322400 Sobic007G039200 Sobic007G039200 Sobic009G201000--Sobic007G039200 Sobic006G156400 Sobic006G156400 Sobic009G201000--Sobic006G156400 Sobic007G144100 Sobic007G144100 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic001G076600 Sobic001G076600 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic005G045800 Sobic005G045800 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic009G178400 Sobic009G178400 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic001G340800 Sobic001G340800 Sobic008G166100--Sobic001G340800 Sobic001G387300 Sobic001G387300 Sobic008G166100--Sobic001G387300 Sobic001G432200 Sobic001G432200 Sobic008G166100--Sobic001G432200 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic001G384200--Sobic007G039200 Sobic002G362500--Sobic001G322400 Sobic002G362500--Sobic001G072000 Sobic002G362500--Sobic009G201000 Sobic002G362500--Sobic008G166100 Sobic002G362500--Sobic007G039200 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic002G362500--Sobic001G387300 Sobic004G074900 Sobic004G074900 Sobic002G362500--Sobic004G074900 Sobic001G072000--Sobic001G322400 Sobic005G050400 Sobic005G050400 Sobic001G072000--Sobic005G050400 Sobic001G112600 Sobic001G112600 Sobic001G072000--Sobic001G112600 Sobic004G279200 Sobic004G279200 Sobic001G072000--Sobic004G279200 Sobic008G156600 Sobic008G156600 Sobic001G072000--Sobic008G156600 Sobic001G072000--Sobic001G432200 Sobic001G072000--Sobic009G163100 Sobic009G242200 Sobic009G242200 Sobic001G072000--Sobic009G242200 Sobic004G038500 Sobic004G038500 Sobic001G072000--Sobic004G038500 Sobic006G265800--Sobic001G384200 Sobic006G134500 Sobic006G134500 Sobic006G265800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic006G265800--Sobic001G400000 Sobic006G265800--Sobic009G163100 Sobic006G265800--Sobic009G201000 Sobic006G265800--Sobic003G024100 Sobic006G265800--Sobic008G156600 Sobic006G265800--Sobic003G244400 Sobic006G265800--Sobic008G007600 Sobic001G322400--Sobic001G072000 Sobic010G073900 Sobic010G073900 Sobic001G322400--Sobic010G073900 Sobic001G322400--Sobic001G432200 Sobic001G322400--Sobic008G166100 Sobic001G322400--Sobic004G279200 Sobic007G048101 Sobic007G048101 Sobic001G322400--Sobic007G048101 Sobic001G322400--Sobic009G202000 Sobic009G238650 Sobic009G238650 Sobic001G322400--Sobic009G238650 Sobic003G407700 Sobic003G407700 Sobic001G322400--Sobic003G407700 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic004G290600 Sobic004G290600 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic006G156400--Sobic009G201000 Sobic008G141100 Sobic008G141100 Sobic006G156400--Sobic008G141100 Sobic006G156400--Sobic009G178400 Sobic009G121200 Sobic009G121200 Sobic006G156400--Sobic009G121200 Sobic006G156400--Sobic009G202000 Sobic005G048500 Sobic005G048500 Sobic006G156400--Sobic005G048500 Sobic006G156400--Sobic001G387300 Sobic001G073700 Sobic001G073700 Sobic006G156400--Sobic001G073700 Sobic009G113500 Sobic009G113500 Sobic006G156400--Sobic009G113500
Octagon: transcription factors


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