Gene annotation
Transcriptome id Sobic.007G039200.3,Sobic.007G039200.1,Sobic.007G039200.2
Synonym Sb07g003330
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1Z5R8V3 , A0A1B6PFL3 , C5YGT6
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF169
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61620 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os08g05510.2,LOC_Os08g05510.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a055220 , Zm00025a030135
Brachypodium KQJ95431 , KQJ95430 , KQJ95433 , KQJ95432 , PNT66806
Barley HORVU7Hr1G072480.10 , HORVU7Hr1G072480.4 , HORVU7Hr1G072480.5 , HORVU7Hr1G072480.6 , HORVU7Hr1G072480.7 , HORVU7Hr1G072480.1 , HORVU7Hr1G072480.2 , HORVU7Hr1G072480.3 , HORVU7Hr1G072480.8 , HORVU7Hr1G072480.9
Wheat TraesCS7B02G204900 , TraesCS7B02G204900 , TraesCS7B02G204900 , TraesCS7A02G304600 , TraesCS7A02G304600 , TraesCS7A02G304600 , TraesCS7D02G300100 , TraesCS7D02G300100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G340800 exocyst complex component 6, putative, expressed -
2 Sobic.002G389600 transcription regulator, putative, expressed -
3 Sobic.009G061500 - -
4 Sobic.008G136601 - -
5 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
6 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
7 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
8 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
9 Sobic.008G159701 - -
10 Sobic.008G148600 B3 DNA binding domain containing protein, expressed -
11 Sobic.010G202200 - -
12 Sobic.003G024100 MRH1, putative, expressed -
13 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
14 Sobic.006G269101 - -
15 Sobic.004G177900 - -
16 Sobic.003G093100 cyclin-related protein, putative, expressed -
17 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
18 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
19 Sobic.001G133400 - -
20 Sobic.002G088600 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase


Gene co-expression network
sample Sobic007G039200 Sobic007G039200 Sobic001G340800 Sobic001G340800 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic004G290600 Sobic004G290600 Sobic007G039200--Sobic004G290600 Sobic008G166100 Sobic008G166100 Sobic007G039200--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic001G370400 Sobic001G370400 Sobic001G340800--Sobic001G370400 Sobic009G061601 Sobic009G061601 Sobic001G340800--Sobic009G061601 Sobic001G340800--Sobic008G136601 Sobic001G340800--Sobic004G290600 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G294500 Sobic001G294500 Sobic001G340800--Sobic001G294500 Sobic007G131000 Sobic007G131000 Sobic001G340800--Sobic007G131000 Sobic003G093100 Sobic003G093100 Sobic001G340800--Sobic003G093100 Sobic002G389600--Sobic008G136601 Sobic008G148600 Sobic008G148600 Sobic002G389600--Sobic008G148600 Sobic006G069766 Sobic006G069766 Sobic002G389600--Sobic006G069766 Sobic002G389600--Sobic009G061500 Sobic002G389600--Sobic001G340800 Sobic003G304600 Sobic003G304600 Sobic002G389600--Sobic003G304600 Sobic006G105100 Sobic006G105100 Sobic002G389600--Sobic006G105100 Sobic004G358000 Sobic004G358000 Sobic002G389600--Sobic004G358000 Sobic002G380300 Sobic002G380300 Sobic002G389600--Sobic002G380300 Sobic009G061500--Sobic009G061601 Sobic009G061500--Sobic008G136601 Sobic003G297100 Sobic003G297100 Sobic009G061500--Sobic003G297100 Sobic009G061500--Sobic001G340800 Sobic009G061500--Sobic008G020800 Sobic005G114201 Sobic005G114201 Sobic009G061500--Sobic005G114201 Sobic009G061500--Sobic008G148600 Sobic009G061500--Sobic001G370400 Sobic007G095333 Sobic007G095333 Sobic009G061500--Sobic007G095333 Sobic006G001100 Sobic006G001100 Sobic008G136601--Sobic006G001100 Sobic006G269101 Sobic006G269101 Sobic008G136601--Sobic006G269101 Sobic008G136601--Sobic009G061601 Sobic001G212500 Sobic001G212500 Sobic008G136601--Sobic001G212500 Sobic005G043300 Sobic005G043300 Sobic008G136601--Sobic005G043300 Sobic001G165700 Sobic001G165700 Sobic008G136601--Sobic001G165700 Sobic002G126400 Sobic002G126400 Sobic008G136601--Sobic002G126400 Sobic008G136601--Sobic007G131000 Sobic003G445300 Sobic003G445300 Sobic008G136601--Sobic003G445300 Sobic010G202200 Sobic010G202200 Sobic009G230800--Sobic010G202200 Sobic009G230800--Sobic006G269101 Sobic004G052600 Sobic004G052600 Sobic009G230800--Sobic004G052600 Sobic009G230800--Sobic008G136601 Sobic009G230800--Sobic001G340800 Sobic004G328500 Sobic004G328500 Sobic009G230800--Sobic004G328500 Sobic009G230800--Sobic008G148600 Sobic005G000900 Sobic005G000900 Sobic009G230800--Sobic005G000900 Sobic005G221675 Sobic005G221675 Sobic009G230800--Sobic005G221675 Sobic004G290600--Sobic001G294500 Sobic004G290600--Sobic009G061601 Sobic006G205400 Sobic006G205400 Sobic004G290600--Sobic006G205400 Sobic002G106600 Sobic002G106600 Sobic004G290600--Sobic002G106600 Sobic004G290600--Sobic003G093100 Sobic004G290600--Sobic007G131000 Sobic004G290600--Sobic005G114201 Sobic001G337100 Sobic001G337100 Sobic004G290600--Sobic001G337100 Sobic010G188500 Sobic010G188500 Sobic004G290600--Sobic010G188500 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic009G178400 Sobic009G178400 Sobic008G166100--Sobic009G178400 Sobic001G322400 Sobic001G322400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic001G387300 Sobic001G387300 Sobic008G166100--Sobic001G387300 Sobic001G432200 Sobic001G432200 Sobic008G166100--Sobic001G432200 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic001G384200--Sobic007G039200 Sobic008G159701--Sobic004G290600 Sobic008G159701--Sobic006G205400 Sobic005G003700 Sobic005G003700 Sobic008G159701--Sobic005G003700 Sobic002G254700 Sobic002G254700 Sobic008G159701--Sobic002G254700 Sobic003G333100 Sobic003G333100 Sobic008G159701--Sobic003G333100 Sobic003G151400 Sobic003G151400 Sobic008G159701--Sobic003G151400 Sobic010G001200 Sobic010G001200 Sobic008G159701--Sobic010G001200 Sobic008G159701--Sobic009G061601 Sobic007G091400 Sobic007G091400 Sobic008G159701--Sobic007G091400
Octagon: transcription factors


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