Gene annotation
Transcriptome id Sobic.008G166100.2,Sobic.008G166100.4,Sobic.008G166100.3
Synonym Sb08g021190
Functional annotation glycosyl transferase family 17 protein, putative, expressed
UniProt C5YRW2
Pfam PF04724
Panther DB PTHR12224 PTHR12224:SF1
NCBI CDD -
KEGG Orthology K00737; beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
Gene Ontology GO:0016020; membrane GO:0006487protein N-linked glycosylation GO:0003830beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G13290 : beta-1,4-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os12g41780.1 : glycosyl transferase family 17 protein, putative, expressed
MaizeGDB (Corn) Zm00025a025356
Brachypodium KQJ85842
Barley HORVU5Hr1G011270.1 , HORVU5Hr1G011270.2 , HORVU6Hr1G013610.1 , HORVU6Hr1G013610.2 , HORVU6Hr1G013610.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.007G039200 MYB family transcription factor, putative, expressed -
3 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
4 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
5 Sobic.003G024100 MRH1, putative, expressed -
6 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
7 Sobic.001G340800 exocyst complex component 6, putative, expressed -
8 Sobic.001G387300 exostosin family domain containing protein, expressed -
9 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
10 Sobic.009G061500 - -
11 Sobic.010G073900 expressed protein -
12 Sobic.003G005700 AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.002G389600 transcription regulator, putative, expressed -
14 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
15 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
16 Sobic.003G175350 - -
17 Sobic.009G002100 expressed protein -
18 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
19 Sobic.007G048101 - -
20 Sobic.009G242600 ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase


Gene co-expression network
sample Sobic008G166100 Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic008G166100--Sobic001G384200 Sobic007G039200 Sobic007G039200 Sobic008G166100--Sobic007G039200 Sobic009G178400 Sobic009G178400 Sobic008G166100--Sobic009G178400 Sobic001G322400 Sobic001G322400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic001G340800 Sobic001G340800 Sobic008G166100--Sobic001G340800 Sobic001G387300 Sobic001G387300 Sobic008G166100--Sobic001G387300 Sobic001G432200 Sobic001G432200 Sobic008G166100--Sobic001G432200 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic001G384200--Sobic007G039200 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic004G290600 Sobic004G290600 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic009G178400--Sobic001G384200 Sobic009G178400--Sobic001G340800 Sobic002G233600 Sobic002G233600 Sobic009G178400--Sobic002G233600 Sobic009G178400--Sobic008G166100 Sobic009G178400--Sobic007G039200 Sobic007G048101 Sobic007G048101 Sobic009G178400--Sobic007G048101 Sobic009G178400--Sobic001G432200 Sobic001G308000 Sobic001G308000 Sobic009G178400--Sobic001G308000 Sobic002G088600 Sobic002G088600 Sobic009G178400--Sobic002G088600 Sobic001G072000 Sobic001G072000 Sobic001G322400--Sobic001G072000 Sobic010G073900 Sobic010G073900 Sobic001G322400--Sobic010G073900 Sobic001G322400--Sobic001G432200 Sobic001G322400--Sobic008G166100 Sobic004G279200 Sobic004G279200 Sobic001G322400--Sobic004G279200 Sobic001G322400--Sobic007G048101 Sobic001G322400--Sobic009G202000 Sobic009G238650 Sobic009G238650 Sobic001G322400--Sobic009G238650 Sobic003G407700 Sobic003G407700 Sobic001G322400--Sobic003G407700 Sobic003G024100--Sobic001G340800 Sobic003G024100--Sobic001G384200 Sobic003G024100--Sobic001G370400 Sobic003G024100--Sobic009G061500 Sobic003G024100--Sobic008G136601 Sobic006G001100 Sobic006G001100 Sobic003G024100--Sobic006G001100 Sobic007G091400 Sobic007G091400 Sobic003G024100--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G024100--Sobic010G003200 Sobic009G061601 Sobic009G061601 Sobic003G024100--Sobic009G061601 Sobic009G202000--Sobic001G432200 Sobic009G202000--Sobic004G290600 Sobic010G142650 Sobic010G142650 Sobic009G202000--Sobic010G142650 Sobic009G202000--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic009G202000--Sobic003G093100 Sobic009G202000--Sobic010G003200 Sobic009G202000--Sobic001G370400 Sobic006G171600 Sobic006G171600 Sobic009G202000--Sobic006G171600 Sobic004G177900 Sobic004G177900 Sobic009G202000--Sobic004G177900 Sobic001G340800--Sobic001G370400 Sobic001G340800--Sobic009G061601 Sobic001G340800--Sobic008G136601 Sobic001G340800--Sobic004G290600 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G294500 Sobic001G294500 Sobic001G340800--Sobic001G294500 Sobic007G131000 Sobic007G131000 Sobic001G340800--Sobic007G131000 Sobic001G340800--Sobic003G093100 Sobic001G387300--Sobic001G384200 Sobic001G387300--Sobic009G178400 Sobic001G387300--Sobic008G166100 Sobic001G387300--Sobic001G322400 Sobic004G113600 Sobic004G113600 Sobic001G387300--Sobic004G113600 Sobic001G387300--Sobic009G202000 Sobic001G387300--Sobic003G244400 Sobic001G387300--Sobic001G072000 Sobic001G387300--Sobic001G432200 Sobic001G432200--Sobic003G093100 Sobic001G432200--Sobic001G370400 Sobic003G297100 Sobic003G297100 Sobic001G432200--Sobic003G297100 Sobic001G432200--Sobic009G061601 Sobic003G151400 Sobic003G151400 Sobic001G432200--Sobic003G151400 Sobic001G432200--Sobic002G088600 Sobic001G432200--Sobic004G290600 Sobic006G204500 Sobic006G204500 Sobic001G432200--Sobic006G204500 Sobic001G432200--Sobic001G294500
Octagon: transcription factors


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