Gene annotation
Transcriptome id Sobic.009G202000.1
Synonym Sb09g025950, GATA9
Functional annotation GATA zinc finger domain containing protein, expressed
UniProt C5Z1B9
Pfam PF00320
Panther DB PTHR10071 PTHR10071:SF202
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G25830 : GATA transcription factor 12
RAP-DB (Rice) LOC_Os05g44400.1 : GATA zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040057 , Zm00025a044324 , Zm00025a037972 , Zm00025a003323
Brachypodium KQK09702 , KQK05338 , KQK05337
Barley HORVU3Hr1G071030.4 , HORVU3Hr1G071030.5 , HORVU3Hr1G071030.6 , HORVU3Hr1G071030.7 , HORVU3Hr1G071030.1 , HORVU3Hr1G071030.2 , HORVU3Hr1G071030.3 , HORVU3Hr1G071030.8 , HORVU1Hr1G076000.6 , HORVU1Hr1G076000.4 , HORVU1Hr1G076000.5 , HORVU1Hr1G076000.2 , HORVU1Hr1G076000.3 , HORVU1Hr1G076000.1
Wheat TraesCS1D02G343000 , TraesCS3A02G274900 , TraesCS4D02G362800 , TraesCS3D02G274600 , TraesCS1D02G223200 , TraesCS1A02G340900 , TraesCS1B02G353700 , TraesCS4B02G374400 , TraesCS3B02G308500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
2 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
3 Sobic.010G142650 - -
4 Sobic.002G088600 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
5 Sobic.003G093100 cyclin-related protein, putative, expressed -
6 Sobic.010G003200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
7 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
8 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
9 Sobic.004G177900 - -
10 Sobic.009G061500 - -
11 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
12 Sobic.009G061601 - -
13 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
14 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
15 Sobic.001G294500 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
16 Sobic.003G297100 expressed protein -
17 Sobic.007G212500 nodulation protein-related, putative, expressed -
18 Sobic.001G135800 pentatricopeptide, putative, expressed -
19 Sobic.004G328500 expressed protein -
20 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -


Gene co-expression network
sample Sobic009G202000 Sobic009G202000 Sobic001G432200 Sobic001G432200 Sobic009G202000--Sobic001G432200 Sobic004G290600 Sobic004G290600 Sobic009G202000--Sobic004G290600 Sobic010G142650 Sobic010G142650 Sobic009G202000--Sobic010G142650 Sobic002G088600 Sobic002G088600 Sobic009G202000--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic009G202000--Sobic003G093100 Sobic010G003200 Sobic010G003200 Sobic009G202000--Sobic010G003200 Sobic001G370400 Sobic001G370400 Sobic009G202000--Sobic001G370400 Sobic006G171600 Sobic006G171600 Sobic009G202000--Sobic006G171600 Sobic004G177900 Sobic004G177900 Sobic009G202000--Sobic004G177900 Sobic001G432200--Sobic003G093100 Sobic001G432200--Sobic001G370400 Sobic003G297100 Sobic003G297100 Sobic001G432200--Sobic003G297100 Sobic009G061601 Sobic009G061601 Sobic001G432200--Sobic009G061601 Sobic003G151400 Sobic003G151400 Sobic001G432200--Sobic003G151400 Sobic001G432200--Sobic002G088600 Sobic001G432200--Sobic004G290600 Sobic006G204500 Sobic006G204500 Sobic001G432200--Sobic006G204500 Sobic001G294500 Sobic001G294500 Sobic001G432200--Sobic001G294500 Sobic004G290600--Sobic001G294500 Sobic004G290600--Sobic009G061601 Sobic006G205400 Sobic006G205400 Sobic004G290600--Sobic006G205400 Sobic002G106600 Sobic002G106600 Sobic004G290600--Sobic002G106600 Sobic004G290600--Sobic003G093100 Sobic007G131000 Sobic007G131000 Sobic004G290600--Sobic007G131000 Sobic005G114201 Sobic005G114201 Sobic004G290600--Sobic005G114201 Sobic001G337100 Sobic001G337100 Sobic004G290600--Sobic001G337100 Sobic010G188500 Sobic010G188500 Sobic004G290600--Sobic010G188500 Sobic006G214900 Sobic006G214900 Sobic010G142650--Sobic006G214900 Sobic010G142650--Sobic005G114201 Sobic007G223400 Sobic007G223400 Sobic010G142650--Sobic007G223400 Sobic006G001700 Sobic006G001700 Sobic010G142650--Sobic006G001700 Sobic008G153700 Sobic008G153700 Sobic010G142650--Sobic008G153700 Sobic006G001650 Sobic006G001650 Sobic010G142650--Sobic006G001650 Sobic002G166000 Sobic002G166000 Sobic010G142650--Sobic002G166000 Sobic003G102900 Sobic003G102900 Sobic010G142650--Sobic003G102900 Sobic001G488950 Sobic001G488950 Sobic010G142650--Sobic001G488950 Sobic002G088600--Sobic004G177900 Sobic002G088600--Sobic003G093100 Sobic002G088600--Sobic001G294500 Sobic008G025400 Sobic008G025400 Sobic002G088600--Sobic008G025400 Sobic002G088600--Sobic003G151400 Sobic004G328500 Sobic004G328500 Sobic002G088600--Sobic004G328500 Sobic002G088600--Sobic007G131000 Sobic002G088600--Sobic009G061601 Sobic005G043300 Sobic005G043300 Sobic002G088600--Sobic005G043300 Sobic003G093100--Sobic008G025400 Sobic003G093100--Sobic001G294500 Sobic003G093100--Sobic003G151400 Sobic003G093100--Sobic002G088600 Sobic003G093100--Sobic004G177900 Sobic003G093100--Sobic007G131000 Sobic003G246500 Sobic003G246500 Sobic003G093100--Sobic003G246500 Sobic003G164400 Sobic003G164400 Sobic003G093100--Sobic003G164400 Sobic003G093100--Sobic009G061601 Sobic004G273600 Sobic004G273600 Sobic010G003200--Sobic004G273600 Sobic009G105100 Sobic009G105100 Sobic010G003200--Sobic009G105100 Sobic010G003200--Sobic003G151400 Sobic002G295800 Sobic002G295800 Sobic010G003200--Sobic002G295800 Sobic010G252600 Sobic010G252600 Sobic010G003200--Sobic010G252600 Sobic002G372000 Sobic002G372000 Sobic010G003200--Sobic002G372000 Sobic005G110160 Sobic005G110160 Sobic010G003200--Sobic005G110160 Sobic001G142501 Sobic001G142501 Sobic010G003200--Sobic001G142501 Sobic005G092100 Sobic005G092100 Sobic010G003200--Sobic005G092100 Sobic001G370400--Sobic009G061601 Sobic001G370400--Sobic003G297100 Sobic001G063300 Sobic001G063300 Sobic001G370400--Sobic001G063300 Sobic001G370400--Sobic006G205400 Sobic001G370400--Sobic007G131000 Sobic001G370400--Sobic003G151400 Sobic007G215200 Sobic007G215200 Sobic001G370400--Sobic007G215200 Sobic002G015900 Sobic002G015900 Sobic001G370400--Sobic002G015900 Sobic001G370400--Sobic001G294500 Sobic006G115700 Sobic006G115700 Sobic006G171600--Sobic006G115700 Sobic006G171600--Sobic010G142650 Sobic009G242200 Sobic009G242200 Sobic006G171600--Sobic009G242200 Sobic006G171600--Sobic004G290600 Sobic006G171600--Sobic006G204500 Sobic006G171600--Sobic010G003200 Sobic006G171600--Sobic003G297100 Sobic002G340600 Sobic002G340600 Sobic006G171600--Sobic002G340600 Sobic002G364700 Sobic002G364700 Sobic006G171600--Sobic002G364700 Sobic004G177900--Sobic002G088600 Sobic004G177900--Sobic001G294500 Sobic004G177900--Sobic003G093100 Sobic004G177900--Sobic008G025400 Sobic004G177900--Sobic004G328500 Sobic004G177900--Sobic005G043300 Sobic004G177900--Sobic003G151400 Sobic004G177900--Sobic007G131000 Sobic004G177900--Sobic003G246500
Octagon: transcription factors


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