Gene annotation
Transcriptome id Sobic.006G171600.1
Synonym Sb06g024690
Functional annotation ZOS4-10 - C2H2 zinc finger protein, expressed
UniProt C5YDI4
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF175
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45120 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os04g46680.1 : ZOS4-10 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a021387 , Zm00025a010298
Brachypodium KQJ83955
Barley HORVU0Hr1G030680.1 , HORVU2Hr1G097410.1 , HORVU2Hr1G097440.1 , HORVU6Hr1G063280.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
2 Sobic.010G142650 - -
3 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
4 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
5 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
6 Sobic.010G003200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
7 Sobic.003G297100 expressed protein -
8 Sobic.002G340600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
9 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
10 Sobic.001G197050 - -
11 Sobic.002G404600 expressed protein -
12 Sobic.004G062200 expressed protein -
13 Sobic.010G188500 OsSub50 - Putative Subtilisin homologue, expressed -
14 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
15 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
16 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
17 Sobic.002G078200 - -
18 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
19 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
20 Sobic.005G114201 - -


Gene co-expression network
sample Sobic006G171600 Sobic006G171600 Sobic006G115700 Sobic006G115700 Sobic006G171600--Sobic006G115700 Sobic010G142650 Sobic010G142650 Sobic006G171600--Sobic010G142650 Sobic009G242200 Sobic009G242200 Sobic006G171600--Sobic009G242200 Sobic004G290600 Sobic004G290600 Sobic006G171600--Sobic004G290600 Sobic006G204500 Sobic006G204500 Sobic006G171600--Sobic006G204500 Sobic010G003200 Sobic010G003200 Sobic006G171600--Sobic010G003200 Sobic003G297100 Sobic003G297100 Sobic006G171600--Sobic003G297100 Sobic002G340600 Sobic002G340600 Sobic006G171600--Sobic002G340600 Sobic002G364700 Sobic002G364700 Sobic006G171600--Sobic002G364700 Sobic006G115700--Sobic003G297100 Sobic007G142801 Sobic007G142801 Sobic006G115700--Sobic007G142801 Sobic001G135800 Sobic001G135800 Sobic006G115700--Sobic001G135800 Sobic006G115700--Sobic002G364700 Sobic009G061601 Sobic009G061601 Sobic006G115700--Sobic009G061601 Sobic001G432200 Sobic001G432200 Sobic006G115700--Sobic001G432200 Sobic005G176700 Sobic005G176700 Sobic006G115700--Sobic005G176700 Sobic006G115700--Sobic006G204500 Sobic001G370400 Sobic001G370400 Sobic006G115700--Sobic001G370400 Sobic006G214900 Sobic006G214900 Sobic010G142650--Sobic006G214900 Sobic005G114201 Sobic005G114201 Sobic010G142650--Sobic005G114201 Sobic007G223400 Sobic007G223400 Sobic010G142650--Sobic007G223400 Sobic006G001700 Sobic006G001700 Sobic010G142650--Sobic006G001700 Sobic008G153700 Sobic008G153700 Sobic010G142650--Sobic008G153700 Sobic006G001650 Sobic006G001650 Sobic010G142650--Sobic006G001650 Sobic002G166000 Sobic002G166000 Sobic010G142650--Sobic002G166000 Sobic003G102900 Sobic003G102900 Sobic010G142650--Sobic003G102900 Sobic001G488950 Sobic001G488950 Sobic010G142650--Sobic001G488950 Sobic002G170100 Sobic002G170100 Sobic009G242200--Sobic002G170100 Sobic003G290500 Sobic003G290500 Sobic009G242200--Sobic003G290500 Sobic002G380300 Sobic002G380300 Sobic009G242200--Sobic002G380300 Sobic009G242200--Sobic006G115700 Sobic003G304600 Sobic003G304600 Sobic009G242200--Sobic003G304600 Sobic004G358000 Sobic004G358000 Sobic009G242200--Sobic004G358000 Sobic007G091400 Sobic007G091400 Sobic009G242200--Sobic007G091400 Sobic009G242200--Sobic003G297100 Sobic009G242200--Sobic001G370400 Sobic001G294500 Sobic001G294500 Sobic004G290600--Sobic001G294500 Sobic004G290600--Sobic009G061601 Sobic006G205400 Sobic006G205400 Sobic004G290600--Sobic006G205400 Sobic002G106600 Sobic002G106600 Sobic004G290600--Sobic002G106600 Sobic003G093100 Sobic003G093100 Sobic004G290600--Sobic003G093100 Sobic007G131000 Sobic007G131000 Sobic004G290600--Sobic007G131000 Sobic004G290600--Sobic005G114201 Sobic001G337100 Sobic001G337100 Sobic004G290600--Sobic001G337100 Sobic010G188500 Sobic010G188500 Sobic004G290600--Sobic010G188500 Sobic006G204500--Sobic009G061601 Sobic004G273600 Sobic004G273600 Sobic006G204500--Sobic004G273600 Sobic008G020800 Sobic008G020800 Sobic006G204500--Sobic008G020800 Sobic001G402900 Sobic001G402900 Sobic006G204500--Sobic001G402900 Sobic006G204500--Sobic010G003200 Sobic002G372000 Sobic002G372000 Sobic006G204500--Sobic002G372000 Sobic007G197000 Sobic007G197000 Sobic006G204500--Sobic007G197000 Sobic006G204500--Sobic002G364700 Sobic004G014200 Sobic004G014200 Sobic006G204500--Sobic004G014200 Sobic010G003200--Sobic004G273600 Sobic009G105100 Sobic009G105100 Sobic010G003200--Sobic009G105100 Sobic003G151400 Sobic003G151400 Sobic010G003200--Sobic003G151400 Sobic002G295800 Sobic002G295800 Sobic010G003200--Sobic002G295800 Sobic010G252600 Sobic010G252600 Sobic010G003200--Sobic010G252600 Sobic010G003200--Sobic002G372000 Sobic005G110160 Sobic005G110160 Sobic010G003200--Sobic005G110160 Sobic001G142501 Sobic001G142501 Sobic010G003200--Sobic001G142501 Sobic005G092100 Sobic005G092100 Sobic010G003200--Sobic005G092100 Sobic003G297100--Sobic007G131000 Sobic003G297100--Sobic009G061601 Sobic001G093100 Sobic001G093100 Sobic003G297100--Sobic001G093100 Sobic003G297100--Sobic007G142801 Sobic003G164400 Sobic003G164400 Sobic003G297100--Sobic003G164400 Sobic007G215200 Sobic007G215200 Sobic003G297100--Sobic007G215200 Sobic003G297100--Sobic003G304600 Sobic003G297100--Sobic006G205400 Sobic005G026700 Sobic005G026700 Sobic003G297100--Sobic005G026700 Sobic006G105100 Sobic006G105100 Sobic002G340600--Sobic006G105100 Sobic002G340600--Sobic002G380300 Sobic001G041600 Sobic001G041600 Sobic002G340600--Sobic001G041600 Sobic006G005300 Sobic006G005300 Sobic002G340600--Sobic006G005300 Sobic003G445300 Sobic003G445300 Sobic002G340600--Sobic003G445300 Sobic006G074150 Sobic006G074150 Sobic002G340600--Sobic006G074150 Sobic005G220400 Sobic005G220400 Sobic002G340600--Sobic005G220400 Sobic005G207700 Sobic005G207700 Sobic002G340600--Sobic005G207700 Sobic002G340600--Sobic003G304600 Sobic002G364700--Sobic006G204500 Sobic002G364700--Sobic005G176700 Sobic002G364700--Sobic001G370400 Sobic002G364700--Sobic006G115700 Sobic002G364700--Sobic008G020800 Sobic002G307400 Sobic002G307400 Sobic002G364700--Sobic002G307400 Sobic004G100300 Sobic004G100300 Sobic002G364700--Sobic004G100300 Sobic003G070400 Sobic003G070400 Sobic002G364700--Sobic003G070400 Sobic006G070032 Sobic006G070032 Sobic002G364700--Sobic006G070032
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.