Gene annotation
Transcriptome id Sobic.002G340600.1,Sobic.002G340600.2
Synonym NDA1, Sb02g036490, ATNDI1
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed
UniProt C5XBL6
Pfam PF00070
Panther DB PTHR22912
NCBI CDD -
KEGG Orthology K17871; NADH:ubiquinone reductase (non-electrogenic)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G07180 : alternative NAD(P)H dehydrogenase 1
RAP-DB (Rice) LOC_Os07g37730.1 : NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048404
Brachypodium PNT74927 , KQK10409 , KQK15734
Barley HORVU3Hr1G087850.8 , HORVU3Hr1G087850.10 , HORVU2Hr1G040130.1 , HORVU2Hr1G040130.2 , HORVU3Hr1G087850.3 , HORVU3Hr1G087850.2 , HORVU3Hr1G087850.1 , HORVU3Hr1G087850.7 , HORVU3Hr1G087850.9
Wheat TraesCS3D02G343900 , TraesCS2A02G203200 , TraesCS3B02G382500 , TraesCS3A02G349900 , TraesCS2D02G212500 , TraesCS2B02G230300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
2 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
3 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
4 Sobic.006G005300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
5 Sobic.003G445300 aquaporin protein, putative, expressed K09873: aquaporin TIP
6 Sobic.006G074150 - -
7 Sobic.005G220400 pollen allergen, putative, expressed -
8 Sobic.005G207700 - -
9 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
10 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
11 Sobic.002G166000 expressed protein -
12 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
13 Sobic.007G145500 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
14 Sobic.009G110800 OsFBX430 - F-box domain containing protein, expressed -
15 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
16 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
17 Sobic.007G095333 - -
18 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.006G164800 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
20 Sobic.005G220500 pollen allergen, putative, expressed -


Gene co-expression network
sample Sobic002G340600 Sobic002G340600 Sobic006G105100 Sobic006G105100 Sobic002G340600--Sobic006G105100 Sobic002G380300 Sobic002G380300 Sobic002G340600--Sobic002G380300 Sobic001G041600 Sobic001G041600 Sobic002G340600--Sobic001G041600 Sobic006G005300 Sobic006G005300 Sobic002G340600--Sobic006G005300 Sobic003G445300 Sobic003G445300 Sobic002G340600--Sobic003G445300 Sobic006G074150 Sobic006G074150 Sobic002G340600--Sobic006G074150 Sobic005G220400 Sobic005G220400 Sobic002G340600--Sobic005G220400 Sobic005G207700 Sobic005G207700 Sobic002G340600--Sobic005G207700 Sobic003G304600 Sobic003G304600 Sobic002G340600--Sobic003G304600 Sobic006G105100--Sobic002G380300 Sobic004G290500 Sobic004G290500 Sobic006G105100--Sobic004G290500 Sobic001G261416 Sobic001G261416 Sobic006G105100--Sobic001G261416 Sobic001G329200 Sobic001G329200 Sobic006G105100--Sobic001G329200 Sobic010G090200 Sobic010G090200 Sobic006G105100--Sobic010G090200 Sobic006G105100--Sobic001G041600 Sobic001G332000 Sobic001G332000 Sobic006G105100--Sobic001G332000 Sobic001G171300 Sobic001G171300 Sobic006G105100--Sobic001G171300 Sobic001G287400 Sobic001G287400 Sobic006G105100--Sobic001G287400 Sobic002G380300--Sobic006G105100 Sobic002G380300--Sobic004G290500 Sobic008G176500 Sobic008G176500 Sobic002G380300--Sobic008G176500 Sobic002G380300--Sobic001G041600 Sobic010G016200 Sobic010G016200 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic002G380300--Sobic001G332000 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400 Sobic002G082400 Sobic002G082400 Sobic001G041600--Sobic002G082400 Sobic005G220500 Sobic005G220500 Sobic001G041600--Sobic005G220500 Sobic001G041600--Sobic003G445300 Sobic003G175600 Sobic003G175600 Sobic001G041600--Sobic003G175600 Sobic001G041600--Sobic005G220400 Sobic001G269200 Sobic001G269200 Sobic001G041600--Sobic001G269200 Sobic009G203900 Sobic009G203900 Sobic001G041600--Sobic009G203900 Sobic004G293300 Sobic004G293300 Sobic001G041600--Sobic004G293300 Sobic002G053800 Sobic002G053800 Sobic001G041600--Sobic002G053800 Sobic001G165700 Sobic001G165700 Sobic006G005300--Sobic001G165700 Sobic006G005300--Sobic001G171300 Sobic006G005300--Sobic001G287400 Sobic010G215000 Sobic010G215000 Sobic006G005300--Sobic010G215000 Sobic006G005300--Sobic001G329200 Sobic003G175950 Sobic003G175950 Sobic006G005300--Sobic003G175950 Sobic006G005300--Sobic001G261416 Sobic007G145500 Sobic007G145500 Sobic006G005300--Sobic007G145500 Sobic006G005300--Sobic001G130500 Sobic003G445300--Sobic005G220400 Sobic003G445300--Sobic002G082400 Sobic003G445300--Sobic005G220500 Sobic002G414000 Sobic002G414000 Sobic003G445300--Sobic002G414000 Sobic003G445300--Sobic001G269200 Sobic006G043101 Sobic006G043101 Sobic003G445300--Sobic006G043101 Sobic005G214800 Sobic005G214800 Sobic003G445300--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic003G445300--Sobic001G246001 Sobic003G445300--Sobic001G165700 Sobic009G207700 Sobic009G207700 Sobic006G074150--Sobic009G207700 Sobic001G093100 Sobic001G093100 Sobic006G074150--Sobic001G093100 Sobic005G040700 Sobic005G040700 Sobic006G074150--Sobic005G040700 Sobic006G074150--Sobic001G130500 Sobic010G051000 Sobic010G051000 Sobic006G074150--Sobic010G051000 Sobic001G306500 Sobic001G306500 Sobic006G074150--Sobic001G306500 Sobic006G074150--Sobic003G175950 Sobic007G222100 Sobic007G222100 Sobic006G074150--Sobic007G222100 Sobic006G074150--Sobic009G203900 Sobic005G220400--Sobic003G445300 Sobic005G220400--Sobic002G082400 Sobic005G220400--Sobic002G414000 Sobic005G220400--Sobic005G220500 Sobic005G220400--Sobic006G043101 Sobic005G220400--Sobic001G269200 Sobic005G220400--Sobic005G214800 Sobic005G220400--Sobic001G246001 Sobic005G220400--Sobic010G215000 Sobic009G110800 Sobic009G110800 Sobic005G207700--Sobic009G110800 Sobic005G207700--Sobic006G043101 Sobic005G207700--Sobic002G414000 Sobic005G207700--Sobic005G214800 Sobic005G207700--Sobic001G246001 Sobic005G207700--Sobic001G269200 Sobic005G207700--Sobic005G220500 Sobic010G107800 Sobic010G107800 Sobic005G207700--Sobic010G107800 Sobic005G207700--Sobic003G445300 Sobic001G306400 Sobic001G306400 Sobic003G304600--Sobic001G306400 Sobic003G304600--Sobic008G176500 Sobic008G154300 Sobic008G154300 Sobic003G304600--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic003G304600--Sobic005G142400 Sobic010G091800 Sobic010G091800 Sobic003G304600--Sobic010G091800 Sobic008G017500 Sobic008G017500 Sobic003G304600--Sobic008G017500 Sobic003G246500 Sobic003G246500 Sobic003G304600--Sobic003G246500 Sobic003G304600--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic003G304600--Sobic001G269800
Octagon: transcription factors


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