Gene annotation
Transcriptome id Sobic.003G304600.1
Synonym ATRGP1, Sb03g035320, RGP1
Functional annotation alpha-1,4-glucan-protein synthase, putative, expressed
UniProt C5XKU8
Pfam PF03214
Panther DB PTHR31682 PTHR31682:SF3
NCBI CDD -
KEGG Orthology K13379; RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
Gene Ontology GO:0016866; intramolecular transferase activity


Orthologs (automatic annotation)
TAIR AT3G02230 : reversibly glycosylated polypeptide 1
RAP-DB (Rice) LOC_Os03g40270.1 : alpha-1,4-glucan-protein synthase, putative, expressed
MaizeGDB (Corn) Zm00025a017325 , Zm00025a048700 , Zm00025a007204
Brachypodium KQK09873 , KQK14266 , KQK15337
Barley HORVU3Hr1G073780.1 , HORVU4Hr1G038960.3 , HORVU4Hr1G038960.1 , HORVU2Hr1G033100.2 , HORVU2Hr1G033100.1 , HORVU4Hr1G038960.4 , HORVU4Hr1G038960.2
Wheat TraesCS2D02G553900 , TraesCS3B02G333100 , TraesCS2A02G174400 , TraesCS3D02G298600 , TraesCS4B02G144900 , TraesCS4D02G151900 , TraesCS4D02G151900 , TraesCS3A02G149600 , TraesCS2B02G200900 , TraesCS2D02G181700 , TraesCS1A02G271600 , TraesCS3A02G303200 , TraesCS4A02G166900
Populus PNT40778


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G306400 expansin precursor, putative, expressed -
2 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.008G154300 flavin monooxygenase, putative, expressed -
4 Sobic.005G142400 plant protein of unknown function domain containing protein, expressed -
5 Sobic.010G091800 expressed protein -
6 Sobic.008G017500 - -
7 Sobic.003G246500 3-5 exonuclease domain-containing protein, putative, expressed -
8 Sobic.002G053800 glycosyl hydrolase family 10 protein, putative, expressed -
9 Sobic.001G269800 - -
10 Sobic.001G306200 expansin precursor, putative, expressed -
11 Sobic.006G159000 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
12 Sobic.009G169500 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
13 Sobic.006G236300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@pectinesterase, putative, expressed -
14 Sobic.001G093100 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
15 Sobic.009G091300 - -
16 Sobic.001G412900 - -
17 Sobic.001G024900 expressed protein -
18 Sobic.010G162700 reticuline oxidase-like protein precursor, putative, expressed -
19 Sobic.004G100900 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.004G293300 zinc-binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G304600 Sobic003G304600 Sobic001G306400 Sobic001G306400 Sobic003G304600--Sobic001G306400 Sobic008G176500 Sobic008G176500 Sobic003G304600--Sobic008G176500 Sobic008G154300 Sobic008G154300 Sobic003G304600--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic003G304600--Sobic005G142400 Sobic010G091800 Sobic010G091800 Sobic003G304600--Sobic010G091800 Sobic008G017500 Sobic008G017500 Sobic003G304600--Sobic008G017500 Sobic003G246500 Sobic003G246500 Sobic003G304600--Sobic003G246500 Sobic002G053800 Sobic002G053800 Sobic003G304600--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic003G304600--Sobic001G269800 Sobic001G306400--Sobic005G142400 Sobic001G306400--Sobic008G154300 Sobic006G159000 Sobic006G159000 Sobic001G306400--Sobic006G159000 Sobic001G306400--Sobic001G269800 Sobic001G306400--Sobic008G017500 Sobic001G024900 Sobic001G024900 Sobic001G306400--Sobic001G024900 Sobic001G306400--Sobic002G053800 Sobic001G306400--Sobic010G091800 Sobic001G306500 Sobic001G306500 Sobic001G306400--Sobic001G306500 Sobic001G041600 Sobic001G041600 Sobic008G176500--Sobic001G041600 Sobic008G176500--Sobic003G304600 Sobic009G203900 Sobic009G203900 Sobic008G176500--Sobic009G203900 Sobic007G222100 Sobic007G222100 Sobic008G176500--Sobic007G222100 Sobic008G176500--Sobic002G053800 Sobic004G293300 Sobic004G293300 Sobic008G176500--Sobic004G293300 Sobic001G130500 Sobic001G130500 Sobic008G176500--Sobic001G130500 Sobic010G051000 Sobic010G051000 Sobic008G176500--Sobic010G051000 Sobic008G176500--Sobic001G024900 Sobic008G154300--Sobic005G142400 Sobic001G306200 Sobic001G306200 Sobic008G154300--Sobic001G306200 Sobic008G154300--Sobic008G017500 Sobic008G154300--Sobic010G091800 Sobic003G394801 Sobic003G394801 Sobic008G154300--Sobic003G394801 Sobic008G154300--Sobic001G306400 Sobic009G169500 Sobic009G169500 Sobic008G154300--Sobic009G169500 Sobic008G154300--Sobic002G053800 Sobic008G154300--Sobic001G269800 Sobic005G142400--Sobic008G154300 Sobic005G142400--Sobic001G306200 Sobic005G142400--Sobic009G169500 Sobic009G091300 Sobic009G091300 Sobic005G142400--Sobic009G091300 Sobic005G142400--Sobic001G306400 Sobic005G142400--Sobic003G394801 Sobic007G112400 Sobic007G112400 Sobic005G142400--Sobic007G112400 Sobic006G236300 Sobic006G236300 Sobic005G142400--Sobic006G236300 Sobic010G162700 Sobic010G162700 Sobic005G142400--Sobic010G162700 Sobic010G091800--Sobic002G053800 Sobic010G091800--Sobic008G154300 Sobic010G091800--Sobic004G293300 Sobic010G091800--Sobic001G269800 Sobic010G091800--Sobic003G394801 Sobic010G091800--Sobic008G017500 Sobic010G091800--Sobic001G306200 Sobic010G091800--Sobic005G142400 Sobic003G175600 Sobic003G175600 Sobic010G091800--Sobic003G175600 Sobic008G017500--Sobic008G154300 Sobic008G017500--Sobic002G053800 Sobic008G017500--Sobic010G091800 Sobic008G017500--Sobic005G142400 Sobic008G017500--Sobic001G306400 Sobic008G017500--Sobic004G293300 Sobic008G017500--Sobic003G394801 Sobic008G017500--Sobic001G306200 Sobic008G017500--Sobic001G269800 Sobic004G100900 Sobic004G100900 Sobic003G246500--Sobic004G100900 Sobic003G246500--Sobic010G091800 Sobic003G246500--Sobic001G269800 Sobic003G246500--Sobic002G053800 Sobic003G246500--Sobic009G203900 Sobic003G246500--Sobic004G293300 Sobic003G246500--Sobic008G154300 Sobic003G246500--Sobic001G306400 Sobic003G246500--Sobic007G222100 Sobic002G053800--Sobic010G091800 Sobic002G053800--Sobic004G293300 Sobic002G053800--Sobic008G017500 Sobic002G053800--Sobic009G203900 Sobic002G053800--Sobic008G154300 Sobic002G053800--Sobic001G269800 Sobic002G053800--Sobic003G175600 Sobic006G282100 Sobic006G282100 Sobic002G053800--Sobic006G282100 Sobic002G053800--Sobic001G306400 Sobic001G269800--Sobic010G091800 Sobic001G269800--Sobic001G306400 Sobic001G269800--Sobic008G154300 Sobic001G269800--Sobic005G142400 Sobic001G269800--Sobic009G091300 Sobic001G269800--Sobic002G053800 Sobic001G269800--Sobic004G293300 Sobic001G269800--Sobic009G203900 Sobic001G269800--Sobic001G024900
Octagon: transcription factors


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