Gene annotation
Transcriptome id Sobic.006G236300.1
Synonym Sb06g030310,
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
pectinesterase, putative, expressed
UniProt C5Y8Z0
Pfam PF04043 PF01095
Panther DB PTHR31707 PTHR31707:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity GO:0005618cell wall


Orthologs (automatic annotation)
TAIR AT5G27870 : Plant invertase/pectin methylesterase inhibitor superfamily
RAP-DB (Rice) LOC_Os04g54850.1 : pectinesterase, putative, expressed
MaizeGDB (Corn) Zm00025a057169 , Zm00025a009587 , Zm00025a030727 , Zm00025a011132 , Zm00025a056197
Brachypodium KQJ84896 , KQJ82959
Barley HORVU3Hr1G091360.6 , HORVU3Hr1G091360.7 , HORVU3Hr1G091360.4 , HORVU3Hr1G091360.2 , HORVU3Hr1G091360.3 , HORVU3Hr1G091360.1 , HORVU2Hr1G115290.1 , HORVU2Hr1G080170.1 , HORVU6Hr1G082990.4 , HORVU2Hr1G115290.2 , HORVU2Hr1G115290.3 , HORVU2Hr1G115290.4 , HORVU2Hr1G115290.5 , HORVU6Hr1G082990.3
Wheat TraesCS2B02G551400 , TraesCS2A02G092800 , TraesCS5D02G224600 , TraesCS5B02G215400 , TraesCS2A02G521900 , TraesCS2B02G107500 , TraesCS2D02G523700 , TraesCS2D02G091800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G162700 reticuline oxidase-like protein precursor, putative, expressed -
2 Sobic.007G112400 polygalacturonase, putative, expressed -
3 Sobic.006G195000 purine permease, putative, expressed -
4 Sobic.009G169500 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
5 Sobic.005G142400 plant protein of unknown function domain containing protein, expressed -
6 Sobic.001G306200 expansin precursor, putative, expressed -
7 Sobic.005G110120 - -
8 Sobic.005G204500 uncharacterized protein At4g06744 precursor, putative, expressed -
9 Sobic.008G154300 flavin monooxygenase, putative, expressed -
10 Sobic.009G091300 - -
11 Sobic.003G394801 - -
12 Sobic.009G091600 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.006G142200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
14 Sobic.001G306400 expansin precursor, putative, expressed -
15 Sobic.005G006300 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
16 Sobic.005G009500 expressed protein -
17 Sobic.008G027900 pollen allergen, putative, expressed -
18 Sobic.008G017500 - -
19 Sobic.008G028000 pollen allergen, putative, expressed -
20 Sobic.010G091800 expressed protein -


Gene co-expression network
sample Sobic006G236300 Sobic006G236300 Sobic010G162700 Sobic010G162700 Sobic006G236300--Sobic010G162700 Sobic007G112400 Sobic007G112400 Sobic006G236300--Sobic007G112400 Sobic006G195000 Sobic006G195000 Sobic006G236300--Sobic006G195000 Sobic009G169500 Sobic009G169500 Sobic006G236300--Sobic009G169500 Sobic005G142400 Sobic005G142400 Sobic006G236300--Sobic005G142400 Sobic001G306200 Sobic001G306200 Sobic006G236300--Sobic001G306200 Sobic005G110120 Sobic005G110120 Sobic006G236300--Sobic005G110120 Sobic005G204500 Sobic005G204500 Sobic006G236300--Sobic005G204500 Sobic008G154300 Sobic008G154300 Sobic006G236300--Sobic008G154300 Sobic010G162700--Sobic006G236300 Sobic010G162700--Sobic006G195000 Sobic010G162700--Sobic007G112400 Sobic010G162700--Sobic009G169500 Sobic010G162700--Sobic001G306200 Sobic010G162700--Sobic005G204500 Sobic010G162700--Sobic005G142400 Sobic010G162700--Sobic005G110120 Sobic010G162700--Sobic008G154300 Sobic007G112400--Sobic006G236300 Sobic007G112400--Sobic010G162700 Sobic007G112400--Sobic006G195000 Sobic007G112400--Sobic005G142400 Sobic007G112400--Sobic009G169500 Sobic007G112400--Sobic001G306200 Sobic007G112400--Sobic008G154300 Sobic007G112400--Sobic005G110120 Sobic009G091600 Sobic009G091600 Sobic007G112400--Sobic009G091600 Sobic006G195000--Sobic010G162700 Sobic006G195000--Sobic006G236300 Sobic006G195000--Sobic007G112400 Sobic006G195000--Sobic005G204500 Sobic006G195000--Sobic009G169500 Sobic006G195000--Sobic001G306200 Sobic006G195000--Sobic005G110120 Sobic006G142200 Sobic006G142200 Sobic006G195000--Sobic006G142200 Sobic006G195000--Sobic005G142400 Sobic009G169500--Sobic001G306200 Sobic003G394801 Sobic003G394801 Sobic009G169500--Sobic003G394801 Sobic009G169500--Sobic005G204500 Sobic009G169500--Sobic005G110120 Sobic009G169500--Sobic005G142400 Sobic009G169500--Sobic008G154300 Sobic009G169500--Sobic010G162700 Sobic009G169500--Sobic006G195000 Sobic005G006300 Sobic005G006300 Sobic009G169500--Sobic005G006300 Sobic005G142400--Sobic008G154300 Sobic005G142400--Sobic001G306200 Sobic005G142400--Sobic009G169500 Sobic009G091300 Sobic009G091300 Sobic005G142400--Sobic009G091300 Sobic001G306400 Sobic001G306400 Sobic005G142400--Sobic001G306400 Sobic005G142400--Sobic003G394801 Sobic005G142400--Sobic007G112400 Sobic005G142400--Sobic006G236300 Sobic005G142400--Sobic010G162700 Sobic001G306200--Sobic009G169500 Sobic001G306200--Sobic003G394801 Sobic001G306200--Sobic005G142400 Sobic001G306200--Sobic008G154300 Sobic001G306200--Sobic005G204500 Sobic001G306200--Sobic009G091300 Sobic001G306200--Sobic010G162700 Sobic001G306200--Sobic005G110120 Sobic001G306200--Sobic005G006300 Sobic005G110120--Sobic009G169500 Sobic005G110120--Sobic009G091300 Sobic005G110120--Sobic001G306200 Sobic005G110120--Sobic005G204500 Sobic005G110120--Sobic006G195000 Sobic005G110120--Sobic006G236300 Sobic005G110120--Sobic010G162700 Sobic005G009500 Sobic005G009500 Sobic005G110120--Sobic005G009500 Sobic005G110120--Sobic005G006300 Sobic005G204500--Sobic006G142200 Sobic005G204500--Sobic005G006300 Sobic005G204500--Sobic009G169500 Sobic005G204500--Sobic006G195000 Sobic005G204500--Sobic001G306200 Sobic005G204500--Sobic003G394801 Sobic005G204500--Sobic005G009500 Sobic005G204500--Sobic005G110120 Sobic005G204500--Sobic010G162700 Sobic008G154300--Sobic005G142400 Sobic008G154300--Sobic001G306200 Sobic008G017500 Sobic008G017500 Sobic008G154300--Sobic008G017500 Sobic010G091800 Sobic010G091800 Sobic008G154300--Sobic010G091800 Sobic008G154300--Sobic003G394801 Sobic008G154300--Sobic001G306400 Sobic008G154300--Sobic009G169500 Sobic002G053800 Sobic002G053800 Sobic008G154300--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic008G154300--Sobic001G269800
Octagon: transcription factors


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