Gene annotation
Transcriptome id Sobic.004G062200.5,Sobic.004G062200.2,Sobic.004G062200.4
Synonym
Functional annotation expressed protein
UniProt A0A194YN08 , A0A1Z5RL62 , A0A1Z5RL66
Pfam -
Panther DB PTHR33416 PTHR33416:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g08080.1 : expressed protein
MaizeGDB (Corn) Zm00025a019171
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
2 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
3 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
4 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
5 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase
6 Sobic.010G052900 expressed protein -
7 Sobic.005G050400 syntaxin 6, putative, expressed -
8 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
9 Sobic.007G063800 - -
10 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
11 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
12 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
13 Sobic.002G299500 expressed protein -
14 Sobic.001G357400 emp24/gp25L/p24 family protein, putative, expressed -
15 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
16 Sobic.002G078200 - -
17 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
18 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
19 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
20 Sobic.001G135800 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic004G062200 Sobic004G062200 Sobic006G171600 Sobic006G171600 Sobic004G062200--Sobic006G171600 Sobic004G279200 Sobic004G279200 Sobic004G062200--Sobic004G279200 Sobic001G072000 Sobic001G072000 Sobic004G062200--Sobic001G072000 Sobic001G112600 Sobic001G112600 Sobic004G062200--Sobic001G112600 Sobic006G070564 Sobic006G070564 Sobic004G062200--Sobic006G070564 Sobic010G052900 Sobic010G052900 Sobic004G062200--Sobic010G052900 Sobic005G050400 Sobic005G050400 Sobic004G062200--Sobic005G050400 Sobic006G115700 Sobic006G115700 Sobic004G062200--Sobic006G115700 Sobic007G063800 Sobic007G063800 Sobic004G062200--Sobic007G063800 Sobic006G171600--Sobic006G115700 Sobic010G142650 Sobic010G142650 Sobic006G171600--Sobic010G142650 Sobic009G242200 Sobic009G242200 Sobic006G171600--Sobic009G242200 Sobic004G290600 Sobic004G290600 Sobic006G171600--Sobic004G290600 Sobic006G204500 Sobic006G204500 Sobic006G171600--Sobic006G204500 Sobic010G003200 Sobic010G003200 Sobic006G171600--Sobic010G003200 Sobic003G297100 Sobic003G297100 Sobic006G171600--Sobic003G297100 Sobic002G340600 Sobic002G340600 Sobic006G171600--Sobic002G340600 Sobic002G364700 Sobic002G364700 Sobic006G171600--Sobic002G364700 Sobic004G279200--Sobic001G072000 Sobic004G279200--Sobic006G070564 Sobic004G279200--Sobic005G050400 Sobic001G322400 Sobic001G322400 Sobic004G279200--Sobic001G322400 Sobic001G414650 Sobic001G414650 Sobic004G279200--Sobic001G414650 Sobic004G279200--Sobic004G062200 Sobic006G267100 Sobic006G267100 Sobic004G279200--Sobic006G267100 Sobic004G279200--Sobic006G171600 Sobic004G279200--Sobic001G112600 Sobic001G072000--Sobic001G322400 Sobic001G072000--Sobic005G050400 Sobic001G072000--Sobic001G112600 Sobic001G072000--Sobic004G279200 Sobic008G156600 Sobic008G156600 Sobic001G072000--Sobic008G156600 Sobic001G432200 Sobic001G432200 Sobic001G072000--Sobic001G432200 Sobic009G163100 Sobic009G163100 Sobic001G072000--Sobic009G163100 Sobic001G072000--Sobic009G242200 Sobic004G038500 Sobic004G038500 Sobic001G072000--Sobic004G038500 Sobic001G112600--Sobic005G050400 Sobic001G112600--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic001G112600--Sobic003G441000 Sobic002G170100 Sobic002G170100 Sobic001G112600--Sobic002G170100 Sobic001G112600--Sobic001G414650 Sobic003G244400 Sobic003G244400 Sobic001G112600--Sobic003G244400 Sobic008G055200 Sobic008G055200 Sobic001G112600--Sobic008G055200 Sobic004G358000 Sobic004G358000 Sobic001G112600--Sobic004G358000 Sobic005G144000 Sobic005G144000 Sobic001G112600--Sobic005G144000 Sobic001G039100 Sobic001G039100 Sobic006G070564--Sobic001G039100 Sobic006G070564--Sobic004G279200 Sobic006G189300 Sobic006G189300 Sobic006G070564--Sobic006G189300 Sobic002G404600 Sobic002G404600 Sobic006G070564--Sobic002G404600 Sobic001G503600 Sobic001G503600 Sobic006G070564--Sobic001G503600 Sobic006G070564--Sobic001G414650 Sobic010G038300 Sobic010G038300 Sobic006G070564--Sobic010G038300 Sobic001G357400 Sobic001G357400 Sobic006G070564--Sobic001G357400 Sobic007G196700 Sobic007G196700 Sobic006G070564--Sobic007G196700 Sobic006G197900 Sobic006G197900 Sobic010G052900--Sobic006G197900 Sobic010G052900--Sobic006G171600 Sobic010G052900--Sobic004G062200 Sobic010G052900--Sobic001G112600 Sobic004G154100 Sobic004G154100 Sobic010G052900--Sobic004G154100 Sobic010G052900--Sobic006G267100 Sobic002G257001 Sobic002G257001 Sobic010G052900--Sobic002G257001 Sobic010G052900--Sobic001G414650 Sobic008G071300 Sobic008G071300 Sobic010G052900--Sobic008G071300 Sobic005G050400--Sobic001G112600 Sobic005G050400--Sobic001G072000 Sobic005G050400--Sobic008G156600 Sobic005G050400--Sobic009G242200 Sobic005G050400--Sobic002G170100 Sobic005G050400--Sobic003G441000 Sobic004G007400 Sobic004G007400 Sobic005G050400--Sobic004G007400 Sobic005G050400--Sobic005G144000 Sobic005G050400--Sobic009G163100 Sobic006G115700--Sobic003G297100 Sobic007G142801 Sobic007G142801 Sobic006G115700--Sobic007G142801 Sobic001G135800 Sobic001G135800 Sobic006G115700--Sobic001G135800 Sobic006G115700--Sobic002G364700 Sobic009G061601 Sobic009G061601 Sobic006G115700--Sobic009G061601 Sobic006G115700--Sobic001G432200 Sobic005G176700 Sobic005G176700 Sobic006G115700--Sobic005G176700 Sobic006G115700--Sobic006G204500 Sobic001G370400 Sobic001G370400 Sobic006G115700--Sobic001G370400 Sobic007G063800--Sobic010G038300 Sobic005G202901 Sobic005G202901 Sobic007G063800--Sobic005G202901 Sobic010G266600 Sobic010G266600 Sobic007G063800--Sobic010G266600 Sobic007G063800--Sobic006G204500 Sobic004G014200 Sobic004G014200 Sobic007G063800--Sobic004G014200 Sobic006G070032 Sobic006G070032 Sobic007G063800--Sobic006G070032 Sobic007G063800--Sobic002G364700 Sobic008G007600 Sobic008G007600 Sobic007G063800--Sobic008G007600 Sobic008G029800 Sobic008G029800 Sobic007G063800--Sobic008G029800
Octagon: transcription factors


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