Gene annotation
Transcriptome id Sobic.006G070564.1
Synonym -
Functional annotation -
UniProt A2I9A3 , C6JS53 , A2I9A2 , C5YFW1
Pfam PF08244 PF00251
Panther DB PTHR31953 PTHR31953:SF3
NCBI CDD -
KEGG Orthology K01193; INV, beta-fructofuranosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52600 : cell wall invertase 2
RAP-DB (Rice) LOC_Os04g33740.1 : glycosyl hydrolases, putative, expressed
MaizeGDB (Corn) Zm00025a056002 , Zm00025a056001 , Zm00025a011504 , Zm00025a020547 , Zm00025a018649
Brachypodium KQJ99739 , KQK13342 , KQJ82524 , KQJ99740
Barley HORVU3Hr1G005350.4 , HORVU3Hr1G005350.2 , HORVU3Hr1G005350.3 , HORVU3Hr1G005350.1 , HORVU2Hr1G073210.8 , HORVU2Hr1G073210.7 , HORVU2Hr1G073210.1 , HORVU4Hr1G086300.9 , HORVU4Hr1G086300.7 , HORVU4Hr1G086300.4 , HORVU4Hr1G086300.3 , HORVU4Hr1G086300.2 , HORVU4Hr1G086300.1 , HORVU4Hr1G086300.8 , HORVU4Hr1G086300.14 , HORVU4Hr1G086300.13 , HORVU4Hr1G086300.12 , HORVU4Hr1G086300.11 , HORVU4Hr1G086300.10 , HORVU4Hr1G011000.1 , HORVU2Hr1G073210.6 , HORVU2Hr1G073210.5 , HORVU2Hr1G073210.4 , HORVU2Hr1G073210.3 , HORVU2Hr1G073210.2
Wheat TraesCS2A02G386100 , TraesCS2A02G386100 , TraesCS2A02G386100 , TraesCS2D02G382600 , TraesCS2D02G382600 , TraesCS2B02G403000 , TraesCS2D02G293200 , TraesCS4B02G356800 , TraesCS2B02G311900 , TraesCS2A02G295400 , TraesCS4D02G350500 , TraesCS5A02G526200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
2 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
3 Sobic.006G189300 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
4 Sobic.002G404600 expressed protein -
5 Sobic.001G503600 expressed protein -
6 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
7 Sobic.010G038300 OsFBDUF33 - F-box and DUF domain containing protein, expressed -
8 Sobic.001G357400 emp24/gp25L/p24 family protein, putative, expressed -
9 Sobic.007G196700 expressed protein -
10 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
11 Sobic.002G308900 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
12 Sobic.005G144000 glycosyltransferase, putative, expressed -
13 Sobic.002G078200 - -
14 Sobic.001G402900 methyltransferase domain containing protein, expressed -
15 Sobic.004G014200 serpin domain containing protein, putative, expressed K13963: serpin B
16 Sobic.006G070032 - K01193: INV, beta-fructofuranosidase
17 Sobic.001G240600 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
18 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
19 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
20 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote


Gene co-expression network
sample Sobic006G070564 Sobic006G070564 Sobic001G039100 Sobic001G039100 Sobic006G070564--Sobic001G039100 Sobic004G279200 Sobic004G279200 Sobic006G070564--Sobic004G279200 Sobic006G189300 Sobic006G189300 Sobic006G070564--Sobic006G189300 Sobic002G404600 Sobic002G404600 Sobic006G070564--Sobic002G404600 Sobic001G503600 Sobic001G503600 Sobic006G070564--Sobic001G503600 Sobic001G414650 Sobic001G414650 Sobic006G070564--Sobic001G414650 Sobic010G038300 Sobic010G038300 Sobic006G070564--Sobic010G038300 Sobic001G357400 Sobic001G357400 Sobic006G070564--Sobic001G357400 Sobic007G196700 Sobic007G196700 Sobic006G070564--Sobic007G196700 Sobic001G039100--Sobic002G404600 Sobic001G039100--Sobic007G196700 Sobic002G381500 Sobic002G381500 Sobic001G039100--Sobic002G381500 Sobic002G308900 Sobic002G308900 Sobic001G039100--Sobic002G308900 Sobic009G110600 Sobic009G110600 Sobic001G039100--Sobic009G110600 Sobic006G105100 Sobic006G105100 Sobic001G039100--Sobic006G105100 Sobic002G380300 Sobic002G380300 Sobic001G039100--Sobic002G380300 Sobic001G039100--Sobic001G414650 Sobic004G290500 Sobic004G290500 Sobic001G039100--Sobic004G290500 Sobic001G072000 Sobic001G072000 Sobic004G279200--Sobic001G072000 Sobic004G279200--Sobic006G070564 Sobic005G050400 Sobic005G050400 Sobic004G279200--Sobic005G050400 Sobic001G322400 Sobic001G322400 Sobic004G279200--Sobic001G322400 Sobic004G279200--Sobic001G414650 Sobic004G062200 Sobic004G062200 Sobic004G279200--Sobic004G062200 Sobic006G267100 Sobic006G267100 Sobic004G279200--Sobic006G267100 Sobic006G171600 Sobic006G171600 Sobic004G279200--Sobic006G171600 Sobic001G112600 Sobic001G112600 Sobic004G279200--Sobic001G112600 Sobic006G189300--Sobic002G308900 Sobic001G227000 Sobic001G227000 Sobic006G189300--Sobic001G227000 Sobic006G189300--Sobic002G404600 Sobic006G189300--Sobic001G039100 Sobic006G189300--Sobic002G381500 Sobic007G007700 Sobic007G007700 Sobic006G189300--Sobic007G007700 Sobic006G204500 Sobic006G204500 Sobic006G189300--Sobic006G204500 Sobic007G204200 Sobic007G204200 Sobic006G189300--Sobic007G204200 Sobic001G538425 Sobic001G538425 Sobic006G189300--Sobic001G538425 Sobic002G404600--Sobic007G204200 Sobic002G404600--Sobic004G290500 Sobic001G089400 Sobic001G089400 Sobic002G404600--Sobic001G089400 Sobic005G037700 Sobic005G037700 Sobic002G404600--Sobic005G037700 Sobic004G192600 Sobic004G192600 Sobic002G404600--Sobic004G192600 Sobic003G004000 Sobic003G004000 Sobic002G404600--Sobic003G004000 Sobic007G197000 Sobic007G197000 Sobic002G404600--Sobic007G197000 Sobic002G404600--Sobic002G381500 Sobic002G404600--Sobic002G380300 Sobic001G503600--Sobic001G414650 Sobic008G071300 Sobic008G071300 Sobic001G503600--Sobic008G071300 Sobic005G144000 Sobic005G144000 Sobic001G503600--Sobic005G144000 Sobic009G242200 Sobic009G242200 Sobic001G503600--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic001G503600--Sobic002G170100 Sobic001G503600--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic001G503600--Sobic002G340600 Sobic001G503600--Sobic002G380300 Sobic001G503600--Sobic002G404600 Sobic001G414650--Sobic001G357400 Sobic001G414650--Sobic002G404600 Sobic008G055200 Sobic008G055200 Sobic001G414650--Sobic008G055200 Sobic001G414650--Sobic002G381500 Sobic007G070900 Sobic007G070900 Sobic001G414650--Sobic007G070900 Sobic001G414650--Sobic006G105100 Sobic004G054900 Sobic004G054900 Sobic001G414650--Sobic004G054900 Sobic001G414650--Sobic009G110600 Sobic001G337100 Sobic001G337100 Sobic001G414650--Sobic001G337100 Sobic007G063800 Sobic007G063800 Sobic010G038300--Sobic007G063800 Sobic005G202901 Sobic005G202901 Sobic010G038300--Sobic005G202901 Sobic004G014200 Sobic004G014200 Sobic010G038300--Sobic004G014200 Sobic002G060101 Sobic002G060101 Sobic010G038300--Sobic002G060101 Sobic006G070032 Sobic006G070032 Sobic010G038300--Sobic006G070032 Sobic008G029800 Sobic008G029800 Sobic010G038300--Sobic008G029800 Sobic010G266600 Sobic010G266600 Sobic010G038300--Sobic010G266600 Sobic010G038300--Sobic006G204500 Sobic008G020800 Sobic008G020800 Sobic010G038300--Sobic008G020800 Sobic001G357400--Sobic006G070032 Sobic002G106600 Sobic002G106600 Sobic001G357400--Sobic002G106600 Sobic001G357400--Sobic007G070900 Sobic001G357400--Sobic001G337100 Sobic002G097300 Sobic002G097300 Sobic001G357400--Sobic002G097300 Sobic001G143700 Sobic001G143700 Sobic001G357400--Sobic001G143700 Sobic005G148000 Sobic005G148000 Sobic001G357400--Sobic005G148000 Sobic008G036100 Sobic008G036100 Sobic001G357400--Sobic008G036100 Sobic008G138400 Sobic008G138400 Sobic001G357400--Sobic008G138400 Sobic007G196700--Sobic001G143700 Sobic007G196700--Sobic005G148000 Sobic001G240700 Sobic001G240700 Sobic007G196700--Sobic001G240700 Sobic005G040100 Sobic005G040100 Sobic007G196700--Sobic005G040100 Sobic007G196700--Sobic002G097300 Sobic002G006200 Sobic002G006200 Sobic007G196700--Sobic002G006200 Sobic007G196700--Sobic008G138400 Sobic005G189100 Sobic005G189100 Sobic007G196700--Sobic005G189100 Sobic007G196700--Sobic009G110600
Octagon: transcription factors


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