Gene annotation
Transcriptome id Sobic.001G414650.1
Synonym -
Functional annotation -
UniProt A0A1Z5SAD2
Pfam PF01073
Panther DB PTHR10366 PTHR10366:SF361
NCBI CDD -
KEGG Orthology K08678; UXS1, UDP-glucuronate decarboxylase
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT3G53520 : UDP-glucuronic acid decarboxylase 1
RAP-DB (Rice) LOC_Os03g17230.1 : NAD dependent epimerase/dehydratase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036976 , Zm00025a026947 , Zm00025a024344 , Zm00025a052723 , Zm00025a039701 , Zm00025a043361
Brachypodium KQK10481 , KQK22278
Barley HORVU4Hr1G058500.2 , HORVU4Hr1G058500.3 , HORVU4Hr1G058500.6 , HORVU4Hr1G058500.5 , HORVU4Hr1G058500.10 , HORVU4Hr1G058500.11 , HORVU4Hr1G058500.12 , HORVU4Hr1G058500.13 , HORVU4Hr1G058500.14 , HORVU4Hr1G058500.15 , HORVU3Hr1G087000.1 , HORVU3Hr1G087000.3 , HORVU3Hr1G087000.4 , HORVU4Hr1G058500.1 , HORVU4Hr1G058500.4 , HORVU4Hr1G058500.7 , HORVU4Hr1G058500.8 , HORVU4Hr1G058500.9 , HORVU3Hr1G087000.5 , HORVU3Hr1G087000.6 , HORVU3Hr1G087000.7
Wheat TraesCS4D02G203400 , TraesCS3D02G349200 , TraesCS3B02G388100 , TraesCS4B02G202500 , TraesCS2B02G129600 , TraesCS2B02G129600 , TraesCS4A02G102100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G357400 emp24/gp25L/p24 family protein, putative, expressed -
2 Sobic.002G404600 expressed protein -
3 Sobic.008G055200 dirigent, putative, expressed -
4 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
5 Sobic.007G070900 OsFBL43 - F-box domain and LRR containing protein, expressed -
6 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
7 Sobic.004G054900 expressed protein -
8 Sobic.009G110600 OsFBX422 - F-box domain containing protein, expressed -
9 Sobic.001G337100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
10 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
11 Sobic.007G196700 expressed protein -
12 Sobic.005G176700 methyltransferase, putative, expressed -
13 Sobic.004G290500 actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.001G192300 expressed protein -
15 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
16 Sobic.002G340600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
17 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
18 Sobic.009G182100 cysteine proteinase inhibitor precursor protein, putative, expressed -
19 Sobic.001G143700 cupin domain containing protein, expressed -
20 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G414650 Sobic001G414650 Sobic001G357400 Sobic001G357400 Sobic001G414650--Sobic001G357400 Sobic002G404600 Sobic002G404600 Sobic001G414650--Sobic002G404600 Sobic008G055200 Sobic008G055200 Sobic001G414650--Sobic008G055200 Sobic002G381500 Sobic002G381500 Sobic001G414650--Sobic002G381500 Sobic007G070900 Sobic007G070900 Sobic001G414650--Sobic007G070900 Sobic006G105100 Sobic006G105100 Sobic001G414650--Sobic006G105100 Sobic004G054900 Sobic004G054900 Sobic001G414650--Sobic004G054900 Sobic009G110600 Sobic009G110600 Sobic001G414650--Sobic009G110600 Sobic001G337100 Sobic001G337100 Sobic001G414650--Sobic001G337100 Sobic006G070032 Sobic006G070032 Sobic001G357400--Sobic006G070032 Sobic002G106600 Sobic002G106600 Sobic001G357400--Sobic002G106600 Sobic001G357400--Sobic007G070900 Sobic001G357400--Sobic001G337100 Sobic002G097300 Sobic002G097300 Sobic001G357400--Sobic002G097300 Sobic001G143700 Sobic001G143700 Sobic001G357400--Sobic001G143700 Sobic005G148000 Sobic005G148000 Sobic001G357400--Sobic005G148000 Sobic008G036100 Sobic008G036100 Sobic001G357400--Sobic008G036100 Sobic008G138400 Sobic008G138400 Sobic001G357400--Sobic008G138400 Sobic007G204200 Sobic007G204200 Sobic002G404600--Sobic007G204200 Sobic004G290500 Sobic004G290500 Sobic002G404600--Sobic004G290500 Sobic001G089400 Sobic001G089400 Sobic002G404600--Sobic001G089400 Sobic005G037700 Sobic005G037700 Sobic002G404600--Sobic005G037700 Sobic004G192600 Sobic004G192600 Sobic002G404600--Sobic004G192600 Sobic003G004000 Sobic003G004000 Sobic002G404600--Sobic003G004000 Sobic007G197000 Sobic007G197000 Sobic002G404600--Sobic007G197000 Sobic002G404600--Sobic002G381500 Sobic002G380300 Sobic002G380300 Sobic002G404600--Sobic002G380300 Sobic005G176700 Sobic005G176700 Sobic008G055200--Sobic005G176700 Sobic008G055200--Sobic005G148000 Sobic005G040100 Sobic005G040100 Sobic008G055200--Sobic005G040100 Sobic001G192300 Sobic001G192300 Sobic008G055200--Sobic001G192300 Sobic004G094400 Sobic004G094400 Sobic008G055200--Sobic004G094400 Sobic008G055200--Sobic001G143700 Sobic002G006200 Sobic002G006200 Sobic008G055200--Sobic002G006200 Sobic008G055200--Sobic002G097300 Sobic008G055200--Sobic008G138400 Sobic002G381500--Sobic002G404600 Sobic002G381500--Sobic007G204200 Sobic002G381500--Sobic007G197000 Sobic002G381500--Sobic005G037700 Sobic002G381500--Sobic009G110600 Sobic010G121700 Sobic010G121700 Sobic002G381500--Sobic010G121700 Sobic002G381500--Sobic004G192600 Sobic002G381500--Sobic003G004000 Sobic002G381500--Sobic001G089400 Sobic007G070900--Sobic002G106600 Sobic005G049850 Sobic005G049850 Sobic007G070900--Sobic005G049850 Sobic007G070900--Sobic001G337100 Sobic004G168200 Sobic004G168200 Sobic007G070900--Sobic004G168200 Sobic007G070900--Sobic001G357400 Sobic007G070900--Sobic001G143700 Sobic007G070900--Sobic005G148000 Sobic007G070900--Sobic002G006200 Sobic005G189100 Sobic005G189100 Sobic007G070900--Sobic005G189100 Sobic006G105100--Sobic002G380300 Sobic006G105100--Sobic004G290500 Sobic001G261416 Sobic001G261416 Sobic006G105100--Sobic001G261416 Sobic001G329200 Sobic001G329200 Sobic006G105100--Sobic001G329200 Sobic010G090200 Sobic010G090200 Sobic006G105100--Sobic010G090200 Sobic001G041600 Sobic001G041600 Sobic006G105100--Sobic001G041600 Sobic001G332000 Sobic001G332000 Sobic006G105100--Sobic001G332000 Sobic001G171300 Sobic001G171300 Sobic006G105100--Sobic001G171300 Sobic001G287400 Sobic001G287400 Sobic006G105100--Sobic001G287400 Sobic009G250300 Sobic009G250300 Sobic004G054900--Sobic009G250300 Sobic002G015900 Sobic002G015900 Sobic004G054900--Sobic002G015900 Sobic004G054900--Sobic001G337100 Sobic001G063300 Sobic001G063300 Sobic004G054900--Sobic001G063300 Sobic005G006100 Sobic005G006100 Sobic004G054900--Sobic005G006100 Sobic001G167300 Sobic001G167300 Sobic004G054900--Sobic001G167300 Sobic007G122600 Sobic007G122600 Sobic004G054900--Sobic007G122600 Sobic007G134501 Sobic007G134501 Sobic004G054900--Sobic007G134501 Sobic004G054900--Sobic005G040100 Sobic009G182100 Sobic009G182100 Sobic009G110600--Sobic009G182100 Sobic002G156400 Sobic002G156400 Sobic009G110600--Sobic002G156400 Sobic009G110600--Sobic010G121700 Sobic009G110600--Sobic008G138400 Sobic001G089300 Sobic001G089300 Sobic009G110600--Sobic001G089300 Sobic005G140900 Sobic005G140900 Sobic009G110600--Sobic005G140900 Sobic009G110600--Sobic005G189100 Sobic009G234900 Sobic009G234900 Sobic009G110600--Sobic009G234900 Sobic009G047100 Sobic009G047100 Sobic009G110600--Sobic009G047100 Sobic001G337100--Sobic002G015900 Sobic008G086500 Sobic008G086500 Sobic001G337100--Sobic008G086500 Sobic001G337100--Sobic009G250300 Sobic002G194201 Sobic002G194201 Sobic001G337100--Sobic002G194201 Sobic005G006400 Sobic005G006400 Sobic001G337100--Sobic005G006400 Sobic003G007650 Sobic003G007650 Sobic001G337100--Sobic003G007650 Sobic007G035200 Sobic007G035200 Sobic001G337100--Sobic007G035200 Sobic001G337100--Sobic007G134501 Sobic010G216100 Sobic010G216100 Sobic001G337100--Sobic010G216100
Octagon: transcription factors


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