Gene annotation
Transcriptome id Sobic.004G054900.1
Synonym
Functional annotation expressed protein
UniProt A0A194YMZ2
Pfam -
Panther DB PTHR33065 PTHR33065:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g39140.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G250300 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.001G337100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
4 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.005G006100 hypothetical protein -
6 Sobic.001G167300 - -
7 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.007G134501 - -
9 Sobic.005G040100 expressed protein -
10 Sobic.002G194201 - -
11 Sobic.001G192300 expressed protein -
12 Sobic.003G007650 - -
13 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
14 Sobic.001G143700 cupin domain containing protein, expressed -
15 Sobic.010G216100 leaf senescence related protein, putative, expressed -
16 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
17 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.005G148000 - -
19 Sobic.007G035200 - -
20 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G054900 Sobic004G054900 Sobic009G250300 Sobic009G250300 Sobic004G054900--Sobic009G250300 Sobic002G015900 Sobic002G015900 Sobic004G054900--Sobic002G015900 Sobic001G337100 Sobic001G337100 Sobic004G054900--Sobic001G337100 Sobic001G063300 Sobic001G063300 Sobic004G054900--Sobic001G063300 Sobic005G006100 Sobic005G006100 Sobic004G054900--Sobic005G006100 Sobic001G167300 Sobic001G167300 Sobic004G054900--Sobic001G167300 Sobic007G122600 Sobic007G122600 Sobic004G054900--Sobic007G122600 Sobic007G134501 Sobic007G134501 Sobic004G054900--Sobic007G134501 Sobic005G040100 Sobic005G040100 Sobic004G054900--Sobic005G040100 Sobic009G250300--Sobic002G015900 Sobic009G250300--Sobic001G337100 Sobic009G250300--Sobic004G054900 Sobic009G250300--Sobic007G134501 Sobic002G194201 Sobic002G194201 Sobic009G250300--Sobic002G194201 Sobic009G250300--Sobic007G122600 Sobic009G250300--Sobic005G006100 Sobic009G250300--Sobic005G040100 Sobic003G007650 Sobic003G007650 Sobic009G250300--Sobic003G007650 Sobic002G015900--Sobic009G250300 Sobic002G015900--Sobic001G337100 Sobic002G015900--Sobic001G063300 Sobic008G086500 Sobic008G086500 Sobic002G015900--Sobic008G086500 Sobic005G006400 Sobic005G006400 Sobic002G015900--Sobic005G006400 Sobic002G015900--Sobic002G194201 Sobic002G015900--Sobic003G007650 Sobic007G035200 Sobic007G035200 Sobic002G015900--Sobic007G035200 Sobic002G015900--Sobic007G134501 Sobic001G337100--Sobic002G015900 Sobic001G337100--Sobic008G086500 Sobic001G337100--Sobic009G250300 Sobic001G337100--Sobic002G194201 Sobic001G337100--Sobic005G006400 Sobic001G337100--Sobic003G007650 Sobic001G337100--Sobic007G035200 Sobic001G337100--Sobic007G134501 Sobic010G216100 Sobic010G216100 Sobic001G337100--Sobic010G216100 Sobic001G261416 Sobic001G261416 Sobic001G063300--Sobic001G261416 Sobic010G090200 Sobic010G090200 Sobic001G063300--Sobic010G090200 Sobic010G207800 Sobic010G207800 Sobic001G063300--Sobic010G207800 Sobic001G063300--Sobic010G216100 Sobic007G014000 Sobic007G014000 Sobic001G063300--Sobic007G014000 Sobic010G240300 Sobic010G240300 Sobic001G063300--Sobic010G240300 Sobic007G215200 Sobic007G215200 Sobic001G063300--Sobic007G215200 Sobic001G287400 Sobic001G287400 Sobic001G063300--Sobic001G287400 Sobic001G063300--Sobic005G006100 Sobic005G006100--Sobic007G122600 Sobic005G006100--Sobic007G134501 Sobic005G006100--Sobic002G194201 Sobic005G006100--Sobic003G007650 Sobic005G006100--Sobic010G240300 Sobic005G006100--Sobic005G006400 Sobic005G006100--Sobic007G035200 Sobic005G006100--Sobic005G040100 Sobic005G006100--Sobic010G207800 Sobic003G004000 Sobic003G004000 Sobic001G167300--Sobic003G004000 Sobic001G167300--Sobic005G006100 Sobic001G167300--Sobic010G207800 Sobic001G167300--Sobic007G122600 Sobic008G024200 Sobic008G024200 Sobic001G167300--Sobic008G024200 Sobic004G192600 Sobic004G192600 Sobic001G167300--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic001G167300--Sobic001G089400 Sobic009G234900 Sobic009G234900 Sobic001G167300--Sobic009G234900 Sobic005G189100 Sobic005G189100 Sobic001G167300--Sobic005G189100 Sobic007G122600--Sobic005G006100 Sobic007G122600--Sobic002G194201 Sobic007G122600--Sobic007G134501 Sobic007G122600--Sobic005G040100 Sobic007G122600--Sobic003G007650 Sobic003G245300 Sobic003G245300 Sobic007G122600--Sobic003G245300 Sobic007G122600--Sobic005G006400 Sobic007G122600--Sobic010G240300 Sobic007G122600--Sobic007G035200 Sobic007G134501--Sobic003G007650 Sobic007G134501--Sobic002G194201 Sobic007G134501--Sobic005G040100 Sobic007G134501--Sobic007G035200 Sobic007G134501--Sobic005G006400 Sobic007G134501--Sobic007G122600 Sobic007G134501--Sobic005G006100 Sobic007G134501--Sobic008G086500 Sobic007G134501--Sobic010G240300 Sobic005G148000 Sobic005G148000 Sobic005G040100--Sobic005G148000 Sobic005G040100--Sobic007G134501 Sobic005G040100--Sobic002G194201 Sobic005G040100--Sobic007G122600 Sobic001G143700 Sobic001G143700 Sobic005G040100--Sobic001G143700 Sobic005G040100--Sobic003G007650 Sobic005G040100--Sobic005G006100 Sobic002G006200 Sobic002G006200 Sobic005G040100--Sobic002G006200 Sobic005G040100--Sobic003G245300
Octagon: transcription factors


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